CF417094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC11_SCHPO (Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe GN=ubc11 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.139e-38 Identity = 74/130 (56.92%), Postives = 101/130 (77.69%), Query Frame = 1 Query: 1 MSGDSGISAFPEED-NIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQE-EYRKMVEKLYK 384 MS GISAFP+ D N+ W GTI G DT +EG ++++S+SFP +YP+ PP + F + +HPNVD+ GNICLDIL+DKWS+ Y+V+TILLS+QSLLGEPN +SPLN+QAA+LWS EY++++ + YK Sbjct: 42 MSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQAAELWSKDPIEYKRLLMQRYK 171
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.479e-35 Identity = 73/129 (56.59%), Postives = 94/129 (72.87%), Query Frame = 1 Query: 4 SGDSGISAFPEEDN-IFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEKLYK 384 S ISAFP +DN + W G I G KDT + G ++++SL FP +YPF PP +KF + +HPNVD GNICLDIL++KWS+ Y+V TILLS+QSLLGEPN SPLN+ AA+LW ++ EEYRK V Y+ Sbjct: 23 STTESISAFPVDDNDLTYWVGYITGPKDTPYSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLLGEPNNRSPLNAVAAELWDADMEEYRKKVLACYE 151
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC1_CAEEL (Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 6.693e-31 Identity = 67/123 (54.47%), Postives = 85/123 (69.11%), Query Frame = 1 Query: 13 SGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEKL 378 +G+S P EDNI W+ I G ++T FE ++LSL F +YP KPP VKF + FHPNV G+ICLDILQ++WS YDV IL SIQSLL EPN +SP NS AAQL+ N+ EY K V+++ Sbjct: 22 AGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQI 144
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 9.665e-30 Identity = 64/123 (52.03%), Postives = 83/123 (67.48%), Query Frame = 1 Query: 13 SGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEKL 378 +G+S P E+NI W I G + T FE ++L++ F +YP KPP V+F + FHPNV G+ICLDILQ++WS YDV +IL SIQSLL EPN +SP NSQAAQL+ N+ EY K V + Sbjct: 22 AGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAI 144
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 9.665e-30 Identity = 64/123 (52.03%), Postives = 83/123 (67.48%), Query Frame = 1 Query: 13 SGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEKL 378 +G+S P E+NI W I G + T FE ++L++ F +YP KPP V+F + FHPNV G+ICLDILQ++WS YDV +IL SIQSLL EPN +SP NSQAAQL+ N+ EY K V + Sbjct: 22 AGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAI 144
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.812e-29 Identity = 62/123 (50.41%), Postives = 86/123 (69.92%), Query Frame = 1 Query: 13 SGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWS-NQEEYRKMVEKL 378 +GIS P+++NI W I G DT ++G ++LSL F DYP KPP V+F + FHPN+ G+ICLDILQ++WS YDV IL SIQSLL +PN +SP NS+AA+++S N+ EY + V ++ Sbjct: 22 AGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREV 144
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.265e-29 Identity = 64/122 (52.46%), Postives = 81/122 (66.39%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEKL 378 G+S P E+NI W I G + T FE ++L + F +YP KPP V+F + FHPNV G+ICLDILQ++WS YDV +IL SIQSLL EPN +SP NSQAAQL+ N+ EY K V + Sbjct: 23 GVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAI 144
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.265e-29 Identity = 64/122 (52.46%), Postives = 81/122 (66.39%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEKL 378 G+S P E+NI W I G + T FE ++L + F +YP KPP V+F + FHPNV G+ICLDILQ++WS YDV +IL SIQSLL EPN +SP NSQAAQL+ N+ EY K V + Sbjct: 23 GVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAI 144
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.265e-29 Identity = 64/122 (52.46%), Postives = 81/122 (66.39%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEKL 378 G+S P E+NI W I G + T FE ++L + F +YP KPP V+F + FHPNV G+ICLDILQ++WS YDV +IL SIQSLL EPN +SP NSQAAQL+ N+ EY K V + Sbjct: 23 GVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAI 144
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.265e-29 Identity = 64/122 (52.46%), Postives = 81/122 (66.39%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEKL 378 G+S P E+NI W I G + T FE ++L + F +YP KPP V+F + FHPNV G+ICLDILQ++WS YDV +IL SIQSLL EPN +SP NSQAAQL+ N+ EY K V + Sbjct: 23 GVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAI 144 The following BLAST results are available for this feature:
BLAST of CF417094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417094 ID=CF417094; Name=CF417094; organism=Citrus sinensis; type=EST; length=584bpback to top |