CF417094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UE2NL_HUMAN (Putative ubiquitin-conjugating enzyme E2 N-like OS=Homo sapiens GN=UBE2NL PE=5 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 8.201e-21 Identity = 52/113 (46.02%), Postives = 66/113 (58.41%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQG-SKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQE 351 GI A P+E N + I G SKD+ FEG ++ L +YP PKV+F T +HPNVD I LDIL+DKWS A +RT+LLSIQ+LL PN PL + + W E Sbjct: 22 GIKAEPDESNARYFHVVIAGESKDSPFEGGTFKRELLLAEEYPMAAPKVRFMTKIYHPNVDKLERISLDILKDKWSPALQIRTVLLSIQALLNAPNPDDPLANDVVEQWKTNE 134
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC7_CAEEL (Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis elegans GN=ubc-7 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.399e-20 Identity = 54/133 (40.60%), Postives = 77/133 (57.89%), Query Frame = 1 Query: 16 GISAFPEEDN-IFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQD-------------KWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMV 369 G SA +DN I+ W+ + G DT++EG ++ L FP DYP KPPK+KF + +HPN+D GN+C+ IL D +W + V TILLS+ S+L +PN SP N AA++ N E++K V Sbjct: 22 GFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYAEFKKKV 154
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC1_SCHPO (Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe GN=ubc1 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 3.116e-20 Identity = 47/110 (42.73%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 13 SGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIY-GNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW 339 +GI + D+I KG +G + T +EG + + + P DYPF+PPK+ F+T +HPNV G ICLDIL+D+WS Y +++ L+S+QSLL P S+P ++Q AQ++ Sbjct: 22 AGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVY 131
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 5.316e-20 Identity = 53/143 (37.06%), Postives = 77/143 (53.85%), Query Frame = 1 Query: 37 EDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNV-DIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKL----YKPPSA*F*EDLKELEEGCEKGID 450 ++N +G I G DT +EG Y+L + P YPF PPKV+F T +HPN+ + G ICLDIL+D+W++A +RT+LLS+Q+LL P ++ A + E K +L Y E K++E C G D Sbjct: 33 DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEYTKKIENLCAMGFD 175
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 5.316e-20 Identity = 53/143 (37.06%), Postives = 77/143 (53.85%), Query Frame = 1 Query: 37 EDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNV-DIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKL----YKPPSA*F*EDLKELEEGCEKGID 450 ++N +G I G DT +EG Y+L + P YPF PPKV+F T +HPN+ + G ICLDIL+D+W++A +RT+LLS+Q+LL P ++ A + E K +L Y E K++E C G D Sbjct: 33 DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEYTKKIENLCAMGFD 175
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 5.316e-20 Identity = 53/143 (37.06%), Postives = 77/143 (53.85%), Query Frame = 1 Query: 37 EDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNV-DIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKL----YKPPSA*F*EDLKELEEGCEKGID 450 ++N +G I G DT +EG Y+L + P YPF PPKV+F T +HPN+ + G ICLDIL+D+W++A +RT+LLS+Q+LL P ++ A + E K +L Y E K++E C G D Sbjct: 33 DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEYTKKIENLCAMGFD 175
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 96.2857 bits (238), Expect = 1.184e-19 Identity = 50/136 (36.76%), Postives = 79/136 (58.09%), Query Frame = 1 Query: 16 GISAFPEEDN-IFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDIL-------------QDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQE--EYRKMVEK 375 G SA +DN ++ W+ I G DT++EG ++ L+FP DYP +PPK+KF T +HPNVD G++C+ IL +++W + V TI++S+ S+L +PN SP N AA+ W E+++ V + Sbjct: 24 GFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVAR 159
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 96.2857 bits (238), Expect = 1.184e-19 Identity = 50/136 (36.76%), Postives = 79/136 (58.09%), Query Frame = 1 Query: 16 GISAFPEEDN-IFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDIL-------------QDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQE--EYRKMVEK 375 G SA +DN ++ W+ I G DT++EG ++ L+FP DYP +PPK+KF T +HPNVD G++C+ IL +++W + V TI++S+ S+L +PN SP N AA+ W E+++ V + Sbjct: 24 GFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVAR 159
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3) HSP 1 Score: 96.2857 bits (238), Expect = 1.184e-19 Identity = 50/136 (36.76%), Postives = 79/136 (58.09%), Query Frame = 1 Query: 16 GISAFPEEDN-IFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDIL-------------QDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQE--EYRKMVEK 375 G SA +DN ++ W+ I G DT++EG ++ L+FP DYP +PPK+KF T +HPNVD G++C+ IL +++W + V TI++S+ S+L +PN SP N AA+ W E+++ V + Sbjct: 24 GFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVAR 159
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC27_ARATH (Ubiquitin carrier protein E2 27 OS=Arabidopsis thaliana GN=UBC27 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.547e-19 Identity = 46/108 (42.59%), Postives = 69/108 (63.89%), Query Frame = 1 Query: 13 SGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIY-GNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQ 333 SGI P+ DN+ GTI G T +EG +++ ++ P+ YPF+PPK++F T +HPN+ G ICLDIL+D+WS A ++T L+SIQ+LL P P ++ A+ Sbjct: 21 SGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQDAVVAE 128 The following BLAST results are available for this feature:
BLAST of CF417094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417094 ID=CF417094; Name=CF417094; organism=Citrus sinensis; type=EST; length=584bpback to top |