CF417094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC21_CAEEL (Probable ubiquitin-conjugating enzyme E2 21 OS=Caenorhabditis elegans GN=ubc-21 PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.225e-16 Identity = 46/128 (35.94%), Postives = 73/128 (57.03%), Query Frame = 1 Query: 10 DSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKV---------------KFETGCFHPNVDIY-GNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSN 345 ++GI +E+N+ KG I+G + T + G + + + P YPF+PPKV KF T +HPN+ G ICLDIL+DKW+++ +RT+LLS+Q++L P S P ++ A+ + N Sbjct: 38 EAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLCSPEPSDPQDAVVAKQFIN 165
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC_ASFM2 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) GN=UBC PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.601e-16 Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = 1 Query: 37 EDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQD--------KWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEK 375 EDN+ W ++G DT++EG ++ + FP YP++PP++ F + +HPN+ G +C+ IL WS A + T+LLS+ SLL EPN SP N AA + YRK + K Sbjct: 27 EDNLTEWDVILKGPPDTLYEGGLFKAKIVFPPKYPYEPPRLTFTSEMWHPNIYSDGKLCISILHGDNAEEQGMTWSPAQKIDTVLLSVISLLNEPNPDSPANVDAA------KSYRKYLYK 141
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2S_XENTR (Ubiquitin-conjugating enzyme E2 S OS=Xenopus tropicalis GN=ube2s PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.730e-16 Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQ-LWSNQEEY 357 GI P E++I + I+G + T + G +R+ L D+P PPK F T FHPNV G IC+++L+ W + +R +LL+I+ LL PN S LN +A + L N EEY Sbjct: 30 GIKIIPNEEDITDVQVNIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSTNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEY 144
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2S_RANCA (Ubiquitin-conjugating enzyme E2 S OS=Rana catesbeiana GN=ube2s PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.730e-16 Identity = 45/115 (39.13%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQ-LWSNQEEY 357 GI P E++I + +I+G + T + G +R+ L D+P PPK F T FHPNV G IC+++L+ W + +R +LL+I+ LL PN S LN +A + L N EEY Sbjct: 30 GIKIIPNEEDITDVQVSIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSSNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEY 144
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC_ASFWA (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) GN=UBC PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.566e-16 Identity = 44/121 (36.36%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 37 EDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQD--------KWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEK 375 E+++ W ++G DT++EG ++ ++FP +YP+ PP++ F + +HPN+ G +C+ IL WS A + TILLS+ SLL EPN SP N AA + YRK++ K Sbjct: 27 ENDMTEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPRLTFTSEMWHPNIYPDGKLCISILHGDNAEEQGMTWSPAQKIDTILLSVISLLNEPNPDSPANVDAA------KSYRKLMHK 141
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UB2SB_XENLA (Ubiquitin-conjugating enzyme E2 S-B OS=Xenopus laevis GN=ube2s-B PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.566e-16 Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQ-LWSNQEEY 357 GI P E++I + I+G + T + G +R+ L D+P PPK F T FHPNV G IC+++L+ W + +R +LL+I+ LL PN S LN +A + L N EEY Sbjct: 30 GIKIIPNEEDITDVQVNIEGPEGTPYAGGMFRMKLILGKDFPAAPPKGYFLTKIFHPNVSNNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEY 144
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2T_MOUSE (Ubiquitin-conjugating enzyme E2 T OS=Mus musculus GN=Ube2t PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.657e-16 Identity = 44/121 (36.36%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDIL----QDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKM 366 GI+ + E+D + + I G +T +E + L + P YPF+PP+V+F T +HPN+D G ICLDIL + W + ++ T+L SIQ L+ EPN PL + S++ +Y K+ Sbjct: 21 GITCWQEKDQVADLRAQILGGANTPYEKGVFTLEVIIPERYPFEPPQVRFLTPIYHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLMAEPNPDDPLMADI----SSEFKYNKI 137
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2T_XENLA (Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.082e-16 Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDIL----QDKWSSAYDVRTILLSIQSLLGEPNISSPL 315 G+ + E N+ + I G + +EG + L + P YPF+PPK++F T +HPN+D G ICLDIL + W A ++ T+L SIQ L+ EPN PL Sbjct: 21 GVICWQNESNMDDLRAQIIGGSGSPYEGGIFNLEIIVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDILKLPPKGAWRPALNISTVLTSIQLLMSEPNPDDPL 124
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC8_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC8 PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 6.082e-16 Identity = 46/106 (43.40%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 73 GSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDI-YGNICLDILQDKWSSAYDVRTIL-LSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKLYK 384 G KDT +E +RL + P++YP+K P + F FHPN+DI G+ICLD++ WS YD+ I+ I LL EPN S PLN++AA L Q +K+ E+ K Sbjct: 38 GPKDTPYENGVWRLHVELPDNYPYKSPSIGFVNKIFHPNIDIASGSICLDVINSTWSPLYDLINIVEWMIPGLLKEPNGSDPLNNEAATL---QLRDKKLYEEKIK 140
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBCB_DICDI (Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum GN=ubcB PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.037e-15 Identity = 41/108 (37.96%), Postives = 63/108 (58.33%), Query Frame = 1 Query: 13 SGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIY-GNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQ 333 S SA +DN+ WK T+QG + + FE + + + P DYPFKPP +KF T +HPN+ G IC ++ WS + +L +I+S+L +PN +PL ++ AQ Sbjct: 20 SWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVF-STWSPQLKILDVLTTIRSILTDPNPDNPLETEIAQ 126 The following BLAST results are available for this feature:
BLAST of CF417094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417094 ID=CF417094; Name=CF417094; organism=Citrus sinensis; type=EST; length=584bpback to top |