CF417094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2T_BOVIN (Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.725e-15 Identity = 41/122 (33.61%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDIL----QDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMV 369 GI+ + + D + + I G +T +E ++L + P YPF+PP+++F T +HPN+D G ICLD+L + W + ++ T+L IQ L+ EPN PL + S++ +Y K V Sbjct: 21 GITCWQDGDRMEDLRAQILGGANTPYEKGVFKLEVHIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATLLTCIQQLMAEPNPDDPLMADI----SSEFKYNKPV 138
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.725e-15 Identity = 38/106 (35.85%), Postives = 61/106 (57.55%), Query Frame = 1 Query: 28 FPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSN 345 F + D++ +K I + ++G ++ S YP PPKVK ET +HPN+D+ GN+CL+IL++ W + +I+ +Q L EPN PLN +AA++ N Sbjct: 51 FSDHDDLLNFKLVICPDEG-FYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQN 155
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.725e-15 Identity = 38/106 (35.85%), Postives = 61/106 (57.55%), Query Frame = 1 Query: 28 FPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSN 345 F + D++ +K I + ++G ++ S YP PPKVK ET +HPN+D+ GN+CL+IL++ W + +I+ +Q L EPN PLN +AA++ N Sbjct: 51 FSDHDDLLNFKLVICPDEG-FYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQN 155
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: Y1A1_ENCCU (Probable ubiquitin-conjugating enzyme E2 ECU01_1010 OS=Encephalitozoon cuniculi GN=ECU01_1010 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.783e-15 Identity = 41/114 (35.96%), Postives = 65/114 (57.02%), Query Frame = 1 Query: 82 DTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQ--------------DKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEKL 378 D+++ G + + FP+ YP +PP +KF + FHPN+ G +C+ IL+ DKW+ ++RTI++SI +L PNISSP N A+ ++ N EEY K V ++ Sbjct: 77 DSLYAGRILKAVMKFPSSYPLRPPTLKFVSKMFHPNIYEDGKMCISILEEDKQQDSSVFGDPKDKWTPVQNIRTIVMSIVVILNSPNISSPANVDASVMYRDNPEEYIKEVIRI 190
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2S_DANRE (Ubiquitin-conjugating enzyme E2 S OS=Danio rerio GN=ube2s PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.783e-15 Identity = 42/122 (34.43%), Postives = 69/122 (56.56%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEEYRKMVEKLY 381 GI +P E++I +I+G + T + G +R+ L D+P PP+ F T FHPNV G IC+++L+ W + +R +LL+I+ LL PN S LN +A +L E+Y++ + + Sbjct: 30 GIKIYPSEEDITELHTSIEGPEGTPYAGGVFRMRLVLGKDFPAVPPRGYFLTKIFHPNVGHKGEICVNVLKRDWKAELGLRHVLLTIKCLLIHPNPESALNEEAGKLL--LEDYKEYASRAH 149
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC12_DROME (NEDD8-conjugating enzyme Ubc12 OS=Drosophila melanogaster GN=CG7375 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.783e-15 Identity = 39/117 (33.33%), Postives = 70/117 (59.83%), Query Frame = 1 Query: 28 FPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQ-LWSNQEEYRKMVEK 375 FP+ +++ +K I + +G + + ++YP +PPKVK T +HPN+D+ GN+CL+IL++ W+ ++ +I+ +Q L EPN PLN +AA L +N+ ++ V+K Sbjct: 48 FPDPNDLLNFKLIISPDEGFYRDG-RFVFNFRVGSNYPHEPPKVKCATQVYHPNIDLDGNVCLNILREDWNPVLNINSIVYGLQFLFLEPNPEDPLNKEAADVLQTNRRQFENNVKK 163
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2S_DICDI (Ubiquitin-conjugating enzyme E2 S OS=Dictyostelium discoideum GN=ube2s PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.498e-14 Identity = 43/117 (36.75%), Postives = 65/117 (55.56%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQ-LWSNQEEYRK 363 GI+ P E++I + + G T +EG ++ L +D+P PPK F T FHPNV G IC++ L+ W+ ++ ILL+I+ LL PN S LN A++ L N ++Y K Sbjct: 28 GITLLPCEEDITNIEAVVTGPAGTPYEGGYFKARLILSSDFPRSPPKANFITKIFHPNVSKKGEICVNTLKKDWTEDLGLKHILLTIKCLLIVPNAESSLNEDASRLLLENYDDYCK 144
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC5_ARATH (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 2.555e-14 Identity = 40/112 (35.71%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 73 GSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVD-IYGNICLDILQDKWSSAYDVRTILLS-IQSLLGEPNISSPLNSQAAQLW-----SNQEEYRKMVEKLYKP 387 G KD+++EG +++ + P+ YP+K P V F T +HPNVD + G++CLD++ WS +D+ + + + LL PN S PLN +AA L + ++ ++ EK KP Sbjct: 38 GPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEKYAKP 149
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UB2L3_PONAB (Ubiquitin-conjugating enzyme E2 L3 OS=Pongo abelii GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.555e-14 Identity = 37/119 (31.09%), Postives = 69/119 (57.98%), Query Frame = 1 Query: 34 EEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQ-DKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWS-NQEEYRKMVEKLYK 384 +E N+ W+G I +G +R+ ++FP +YPFKPPK+ F+T +HPN+D G +CL ++ + W A ++ S+ +L+ +P PL + A+ +S +++++ K E+ K Sbjct: 28 DEANLLTWQGLIVPDNPPYDKGA-FRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTK 145
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UB2L3_MOUSE (Ubiquitin-conjugating enzyme E2 L3 OS=Mus musculus GN=Ube2l3 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.555e-14 Identity = 37/119 (31.09%), Postives = 69/119 (57.98%), Query Frame = 1 Query: 34 EEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQ-DKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWS-NQEEYRKMVEKLYK 384 +E N+ W+G I +G +R+ ++FP +YPFKPPK+ F+T +HPN+D G +CL ++ + W A ++ S+ +L+ +P PL + A+ +S +++++ K E+ K Sbjct: 28 DEANLLTWQGLIVPDNPPYDKGA-FRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTK 145 The following BLAST results are available for this feature:
BLAST of CF417094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417094 ID=CF417094; Name=CF417094; organism=Citrus sinensis; type=EST; length=584bpback to top |