CF417094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.265e-29 Identity = 64/122 (52.46%), Postives = 81/122 (66.39%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEKL 378 G+S P E+NI W I G + T FE ++L + F +YP KPP V+F + FHPNV G+ICLDILQ++WS YDV +IL SIQSLL EPN +SP NSQAAQL+ N+ EY K V + Sbjct: 23 GVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAI 144
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC2_SCHPO (Ubiquitin-conjugating enzyme E2 2 OS=Schizosaccharomyces pombe GN=rhp6 PE=1 SV=3) HSP 1 Score: 127.102 bits (318), Expect = 6.265e-29 Identity = 64/122 (52.46%), Postives = 80/122 (65.57%), Query Frame = 1 Query: 13 SGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEK 375 +G+SA P DN+ W I G DT FE ++L LSF YP KPP VKF + FHPNV G +CLDILQ++WS YDV IL SIQSLL +PN +SP N++AAQL N++EY + V K Sbjct: 22 AGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNNASPANAEAAQLHRENKKEYVRRVRK 143
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.069e-28 Identity = 62/121 (51.24%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 13 SGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVE 372 +G+S P ++NI W I G DT FE ++L++ F +YP KPP V+F + FHPNV G ICLDILQ++WS YDV IL SIQSLL +PN +SP NS AAQL+ N+ EY K V+ Sbjct: 22 TGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEKRVK 142
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC2_DEBHA (Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii GN=UBC2 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.069e-28 Identity = 64/122 (52.46%), Postives = 79/122 (64.75%), Query Frame = 1 Query: 13 SGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEK 375 SG+SA P DN+ W I G DT FE +RL L F YP KPP VKF + FHPNV G +CLDILQ++WS YDV +IL SIQSLL +PNISSP N +AA L+ ++ +Y K V + Sbjct: 22 SGVSASPLPDNVMSWNAVIIGPADTPFEDGTFRLILQFDEQYPNKPPSVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSIQSLLNDPNISSPANVEAANLYKDHRSQYIKRVRE 143
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.069e-28 Identity = 64/122 (52.46%), Postives = 79/122 (64.75%), Query Frame = 1 Query: 13 SGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEE-YRKMVEK 375 SG+SA P DN+ W I G DT FE +RL LSF YP KPP+VKF + FHPNV G +CLDILQ++WS YDV +IL S+QSLL +PNISSP N +AA L+ + Y K V + Sbjct: 22 SGVSASPLPDNVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSVQSLLNDPNISSPANVEAANLYKDHRSLYVKRVRE 143
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.069e-28 Identity = 61/123 (49.59%), Postives = 86/123 (69.92%), Query Frame = 1 Query: 13 SGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWS-NQEEYRKMVEKL 378 +GIS P+++NI W I G DT ++G ++LSL F DYP KPP V+F + FHPN+ G+ICLDILQ++WS YDV IL SIQSLL +PN +SP NS+AA+++S ++ EY + V ++ Sbjct: 22 AGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVREV 144
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.396e-28 Identity = 61/123 (49.59%), Postives = 85/123 (69.11%), Query Frame = 1 Query: 13 SGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWS-NQEEYRKMVEKL 378 +GIS P ++NI W I G DT ++G ++L+L F DYP KPP V+F + FHPN+ G+ICLDILQ++WS YDV IL SIQSLL +PN +SP NS+AA+++S N+ EY + V ++ Sbjct: 22 AGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNRKVREV 144
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.396e-28 Identity = 61/120 (50.83%), Postives = 84/120 (70.00%), Query Frame = 1 Query: 13 SGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWS-NQEEYRKMV 369 +GIS P+++NI W I G DT ++G ++LSL F DYP KPP V+F + FHPN+ G+ICLDILQ++WS YDV IL SIQSLL +PN +SP NS+AA+++S ++ EY + V Sbjct: 22 AGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRV 141
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.304e-28 Identity = 62/121 (51.24%), Postives = 86/121 (71.07%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWS-NQEEY-RKMVE 372 GIS P+++NI W I G +DT ++G ++L+L F DYP KPP V+F + FHPN+ G+ICLDILQ++WS YDV +L SIQSLL +PN SP N++AA+L+S N+ EY RK++E Sbjct: 23 GISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKVIE 143
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC2_NECHA (Ubiquitin-conjugating enzyme E2 2 OS=Nectria haematococca GN=UBC2 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.304e-28 Identity = 60/122 (49.18%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 13 SGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEK 375 +G+SA P DN+ W I G DT FE +RL + F YP KPP+VKF + FHPNV G +CLDILQ++WS YDV +L SIQSLL +PN SP N +A+ L+ N++EY K V + Sbjct: 22 AGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSPANVEASNLYKDNRKEYTKRVRE 143 The following BLAST results are available for this feature:
BLAST of CF417094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417094 ID=CF417094; Name=CF417094; organism=Citrus sinensis; type=EST; length=584bpback to top |