CF417094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC12_YEAST (NEDD8-conjugating enzyme UBC12 OS=Saccharomyces cerevisiae GN=UBC12 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.163e-13 Identity = 35/80 (43.75%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 115 SLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEE 354 +L F YP +PPKV FHPN+D+ GN+CL+IL++ WS A D+++I+ + L EPN + PLN AA+L E+ Sbjct: 83 NLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEK 162
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UB2L6_HUMAN (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Homo sapiens GN=UBE2L6 PE=1 SV=4) HSP 1 Score: 75.0998 bits (183), Expect = 2.825e-13 Identity = 40/116 (34.48%), Postives = 60/116 (51.72%), Query Frame = 1 Query: 34 EEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDIL-QDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWS-NQEEYRKMVEK 375 ++ N+ W + + + + L +SFP +YPFKPP +KF T +HPNVD G ICL I+ + W +L ++ L+ PNI PL A L + N E +RK E+ Sbjct: 28 DDANVLVWHALLLPDQPP-YHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEE 142
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC12_KLULA (NEDD8-conjugating enzyme UBC12 OS=Kluyveromyces lactis GN=UBC12 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.819e-13 Identity = 32/81 (39.51%), Postives = 51/81 (62.96%), Query Frame = 1 Query: 91 FEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQ 333 + G Y ++ + YP +PP VK +HPN+DI GN+CL++L++ W+ A D+++I++ I L EPN PLN AA+ Sbjct: 72 YAGGTYYFNVFIKDTYPMEPPVVKCMHRIYHPNIDIDGNVCLNLLREDWTPALDIQSIIIGILFLFHEPNGRDPLNKDAAK 152
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UB12L_ARATH (Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana GN=RCE2 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.220e-13 Identity = 36/103 (34.95%), Postives = 58/103 (56.31%), Query Frame = 1 Query: 25 AFPEEDN-IFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAA 330 +FP N + ++ TI+ + G + S N YP + PKVK +T +HPN+D+ GN+CL+IL++ W ++ T++ + L EPN PLN +AA Sbjct: 52 SFPNGKNDLMNFEVTIKPDEGYYLSGN-FVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAA 153
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila simulans GN=GD17343 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.402e-12 Identity = 39/130 (30.00%), Postives = 66/130 (50.77%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQL----WSNQEEYRKMVEKLYKPPS 393 GI E ++ + I G T + +R+ L+ D+P PPK F T FHPNV G IC++ L+ W ++ ILL+I+ LL PN S LN +A ++ + + + +M+ +++ P+ Sbjct: 33 GIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQPA 162
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila sechellia GN=GM13299 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.402e-12 Identity = 39/130 (30.00%), Postives = 66/130 (50.77%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQL----WSNQEEYRKMVEKLYKPPS 393 GI E ++ + I G T + +R+ L+ D+P PPK F T FHPNV G IC++ L+ W ++ ILL+I+ LL PN S LN +A ++ + + + +M+ +++ P+ Sbjct: 33 GIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQPA 162
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2S_DROME (Ubiquitin-conjugating enzyme E2 S OS=Drosophila melanogaster GN=CG8188 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.402e-12 Identity = 39/130 (30.00%), Postives = 66/130 (50.77%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQL----WSNQEEYRKMVEKLYKPPS 393 GI E ++ + I G T + +R+ L+ D+P PPK F T FHPNV G IC++ L+ W ++ ILL+I+ LL PN S LN +A ++ + + + +M+ +++ P+ Sbjct: 33 GIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQPA 162
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC8_SCHPO (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe GN=ubc8 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.402e-12 Identity = 35/101 (34.65%), Postives = 58/101 (57.43%), Query Frame = 1 Query: 40 DNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVD-IYGNICLDILQDKWSSAYDVRTIL-LSIQSLLGEPNISSPLNSQAAQL 336 DN+ + G +T + G +++ + P++YP+K P + F FHPN+D + G++CLD++ WS +D+ I + + LL PN S PLN +AA L Sbjct: 27 DNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPLNGEAAAL 127
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC4_WHEAT (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.831e-12 Identity = 40/126 (31.75%), Postives = 68/126 (53.97%), Query Frame = 1 Query: 73 GSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVD-IYGNICLDILQDKWSSAYDVRTIL-LSIQSLLGEPNISSPLNSQAAQLW-----SNQEEYRKMVEKLYKPPSA*F*EDLKELEE 429 G KD++++G +++ + YP+K P + F +HPNVD + G++CLD++ WS +D+ I + + LL PN S PLN +AA L + + + ++ E+ KP ED+ EE Sbjct: 38 GPKDSIYQGGVWKVRVELTEAYPYKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPLNGEAASLMMRDKNAYENKVKEYCERYAKP------EDISPEEE 157
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC22_ARATH (Ubiquitin carrier protein E2 22 OS=Arabidopsis thaliana GN=UBC22 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.831e-12 Identity = 41/121 (33.88%), Postives = 63/121 (52.07%), Query Frame = 1 Query: 4 SGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQ-LWSNQEEYRK 363 S GI +++ I+G T +E +R+ L+ +D+P PPK F T FHPNV G IC++ L+ W+ + +R +L ++ LL EP S LN QA + L N +EY + Sbjct: 25 SPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFPESALNEQAGKMLLENYDEYAR 145 The following BLAST results are available for this feature:
BLAST of CF417094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417094 ID=CF417094; Name=CF417094; organism=Citrus sinensis; type=EST; length=584bpback to top |