CF417094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2S_DROPE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila persimilis GN=GL16001 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.187e-11 Identity = 39/130 (30.00%), Postives = 66/130 (50.77%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQL----WSNQEEYRKMVEKLYKPPS 393 GI E ++ + I G T + +R+ L+ D+P PPK F T FHPNV G IC++ L+ W ++ ILL+I+ LL PN S LN +A ++ + + + +M+ +++ P+ Sbjct: 33 GIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAGNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQPA 162
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: RCE1_ARATH (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.187e-11 Identity = 28/65 (43.08%), Postives = 42/65 (64.62%), Query Frame = 1 Query: 136 YPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAA 330 YP + PKVK +T +HPN+D+ GN+CL+IL++ W ++ T++ + L EPN PLN AA Sbjct: 88 YPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNSEDPLNHDAA 152
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 5.891e-11 Identity = 36/98 (36.73%), Postives = 54/98 (55.10%), Query Frame = 1 Query: 40 DNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGC-FHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAA 330 DN+ W + G+ T++ Y+L + FP YP + P+V F + HP++ G+ICLDIL D WS A V ++ +SI S+L SSP + A Sbjct: 41 DNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLS----SSPAKQRPA 134
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC6_YEAST (Ubiquitin-conjugating enzyme E2 6 OS=Saccharomyces cerevisiae GN=UBC6 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.694e-11 Identity = 38/95 (40.00%), Postives = 52/95 (54.74%), Query Frame = 1 Query: 19 ISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFET--GCFHPNVDIYGNICL---DILQDKWSSAYDVRTILLSIQSLL 288 I A P EDNI W I G DT ++G +Y +L+FP+DYP+KPP ++ T G F PN +CL D D W+ + V TIL + S + Sbjct: 25 ILARPNEDNILEWHYIITGPADTPYKGGQYHGTLTFPSDYPYKPPAIRMITPNGRFKPNT----RLCLSMSDYHPDTWNPGWSVSTILNGLLSFM 115 The following BLAST results are available for this feature:
BLAST of CF417094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417094 ID=CF417094; Name=CF417094; organism=Citrus sinensis; type=EST; length=584bpback to top |