CF417094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.801e-26 Identity = 55/112 (49.11%), Postives = 72/112 (64.29%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQE 351 GI+A P+E+N + + G D+ FEG ++L L P DYP PKV+F T +HPN+D G ICLD+L+DKWS A +RTILLSIQ+LL PN PL + A+LW E Sbjct: 22 GINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNE 133
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC2_YEAST (Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae GN=RAD6 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.964e-26 Identity = 59/121 (48.76%), Postives = 78/121 (64.46%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEK 375 G+SA P DN+ W I G DT +E +RL L F +YP KPP VKF + FHPNV G ICLDILQ++W+ YDV +IL SIQSL +PN +SP N +AA L+ ++ +Y K V++ Sbjct: 23 GVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKE 143
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC2_KLULA (Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis GN=UBC2 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.964e-26 Identity = 59/121 (48.76%), Postives = 78/121 (64.46%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKMVEK 375 G+SA P DN+ W I G DT +E +RL L F +YP KPP VKF + FHPNV G ICLDILQ++W+ YDV +IL SIQSL +PN +SP N +AA L+ ++ +Y K V++ Sbjct: 23 GVSASPLPDNVMIWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFQDHKSQYVKRVKE 143
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.886e-25 Identity = 55/112 (49.11%), Postives = 71/112 (63.39%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQE 351 GI A P+E N + I G +D+ FEG ++L L P +YP PKV+F T +HPNVD G ICLDIL+DKWS A +RT+LLSIQ+LL PN PL + A+ W + E Sbjct: 22 GIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSNE 133
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.464e-25 Identity = 55/112 (49.11%), Postives = 70/112 (62.50%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQE 351 GI A P+E N + I G +D+ FEG ++L L P +YP PKV+F T +HPNVD G ICLDIL+DKWS A +RT+LLSIQ+LL PN PL + A+ W E Sbjct: 22 GIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNE 133
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.464e-25 Identity = 55/112 (49.11%), Postives = 70/112 (62.50%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQE 351 GI A P+E N + I G +D+ FEG ++L L P +YP PKV+F T +HPNVD G ICLDIL+DKWS A +RT+LLSIQ+LL PN PL + A+ W E Sbjct: 22 GIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNE 133
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.464e-25 Identity = 55/112 (49.11%), Postives = 70/112 (62.50%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQE 351 GI A P+E N + I G +D+ FEG ++L L P +YP PKV+F T +HPNVD G ICLDIL+DKWS A +RT+LLSIQ+LL PN PL + A+ W E Sbjct: 22 GIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNE 133
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2N_DICDI (Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium discoideum GN=ube2n PE=3 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 2.464e-25 Identity = 56/113 (49.56%), Postives = 70/113 (61.95%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQEE 354 GISA P DN +K I G D+ FEG + L L +DYP PKV+F T +HPN+D G ICLDIL+DKWS A +RT+LLSIQ+LL PN PL + A+ W E+ Sbjct: 22 GISATPATDNFRYFKVAISGPLDSPFEGGVFNLELFLTDDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEHWKTNEK 134
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2N_BOVIN (Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.464e-25 Identity = 55/112 (49.11%), Postives = 70/112 (62.50%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQE 351 GI A P+E N + I G +D+ FEG ++L L P +YP PKV+F T +HPNVD G ICLDIL+DKWS A +RT+LLSIQ+LL PN PL + A+ W E Sbjct: 22 GIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNE 133
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBE2N_MACFA (Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.218e-25 Identity = 55/112 (49.11%), Postives = 70/112 (62.50%), Query Frame = 1 Query: 16 GISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQE 351 GI A P+E N + I G +D+ FEG ++L L P +YP PKV+F T +HPNVD G ICLDIL+DKWS A +RT+LLSIQ+LL PN PL + A+ W E Sbjct: 22 GIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKSGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNE 133 The following BLAST results are available for this feature:
BLAST of CF417094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417094 ID=CF417094; Name=CF417094; organism=Citrus sinensis; type=EST; length=584bpback to top |