CF417094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.012e-23 Identity = 49/110 (44.55%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 22 SAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQE 351 SA P +++F W+ TI G D+ + G + +++ FP DYPFKPPKV F T FHPN++ G+ICLDIL+++WS A + +LLSI SLL +PN PL + A ++ + Sbjct: 22 SAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDK 131
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.012e-23 Identity = 50/106 (47.17%), Postives = 71/106 (66.98%), Query Frame = 1 Query: 22 SAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW 339 SA P +++F W+ TI G D+ + G + +S+ FP DYPFKPPKV F T FHPN++ G+ICLDIL+++WS A + +LLSI SLL +PN PL + A ++ Sbjct: 22 SAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMY 127
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.012e-23 Identity = 50/106 (47.17%), Postives = 71/106 (66.98%), Query Frame = 1 Query: 22 SAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW 339 SA P +++F W+ TI G D+ + G + +++ FP DYPFKPPKV F T FHPNV+ G+ICLDIL+++WS A + +LLSI SLL +PN PL + A ++ Sbjct: 22 SAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMY 127
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UB2D3_BOVIN (Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.933e-23 Identity = 50/116 (43.10%), Postives = 79/116 (68.10%), Query Frame = 1 Query: 22 SAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW-SNQEEYRKM 366 SA P D++F W+ TI G D+ ++G + L++ FP DYPFKPPKV F T +HPN++ +ICLDIL+ +WS A + +LLSI SLL +PN PL + A+++ +++++Y ++ Sbjct: 22 SAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNDSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRI 137
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 5.137e-23 Identity = 49/109 (44.95%), Postives = 73/109 (66.97%), Query Frame = 1 Query: 13 SGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW 339 S SA P +++F W+ TI G ++ + G + +S+ FP DYPFKPPKV F+T +HPN++ G+ICLDIL+++WS A + +LLSI SLL +PN PL + A ++ Sbjct: 19 SNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMY 127
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.709e-23 Identity = 49/106 (46.23%), Postives = 70/106 (66.04%), Query Frame = 1 Query: 22 SAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLW 339 SA P D+++ W+ +I G D+ + G + LS+ FP DYPFKPPK+ F T +HPN++ GNICLDIL+D+WS A + +LLSI SLL + N PL + A ++ Sbjct: 23 SAGPVGDDLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINANGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAHIY 128
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UB2E2_MOUSE (Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.762e-23 Identity = 56/122 (45.90%), Postives = 77/122 (63.11%), Query Frame = 1 Query: 22 SAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPL-NSQAAQLWSNQEEYRKMVEKLYK 384 SA P+ DNI+ W+ TI G +V+EG + L ++F DYPFKPPKV F T +H N++ G ICLDIL+D WS A + +LLSI SLL + N + PL S A Q +N+ E+ +M + K Sbjct: 76 SAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTK 197
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.762e-23 Identity = 56/122 (45.90%), Postives = 77/122 (63.11%), Query Frame = 1 Query: 22 SAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPL-NSQAAQLWSNQEEYRKMVEKLYK 384 SA P+ DNI+ W+ TI G +V+EG + L ++F DYPFKPPKV F T +H N++ G ICLDIL+D WS A + +LLSI SLL + N + PL S A Q +N+ E+ +M + K Sbjct: 76 SAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTK 197
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.144e-22 Identity = 51/115 (44.35%), Postives = 72/115 (62.61%), Query Frame = 1 Query: 1 MSGDSGISAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSN 345 +S +S S +NI+ W I+G T +EG + LS+ FP DYPFKPPK F+T +HPN++ G+IC++IL+DKW+ A V +LLSI LL +PN PL + QL+ N Sbjct: 21 ISKESLFSIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKN 135
BLAST of CF417094 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.144e-22 Identity = 48/110 (43.64%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 22 SAFPEEDNIFCWKGTIQGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNSQAAQLWSNQE 351 SA P +++F W+ TI G ++ + G + +++ FP DYPFKPPKV F T FHPN++ G+ICLDIL+++WS A + +LLSI SLL +PN PL + A ++ + Sbjct: 22 SAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDK 131 The following BLAST results are available for this feature:
BLAST of CF417094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417094 ID=CF417094; Name=CF417094; organism=Citrus sinensis; type=EST; length=584bpback to top |