CF417095
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBA2_HOMAM (Tubulin alpha-2 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 4.650e-39 Identity = 74/210 (35.24%), Postives = 122/210 (58.10%), Query Frame = 2 Query: 5 AENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 634 A+ C LQGF + + ++ EY + L +++P+P+ + +VVEPYN+ L+ H +E++D C ++DNEA++DIC R L +S P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF + ++P+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V + NV Sbjct: 126 ADQCTGLQGFLIFRSFGGGTGSGFASLLMERLSVEYGKKSKLEIAIYPAPQSATSVVEPYNSILTTHTTLEHSDCCFMVDNEAIFDICQRNLDVSRPTYTNLNRLIGQIVSSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLTTYSPIISAEKAYHEQLSVGEITSACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVTASIANV 335
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBAL3_MOUSE (Tubulin alpha chain-like 3 OS=Mus musculus GN=Tubal3 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.036e-38 Identity = 77/205 (37.56%), Postives = 115/205 (56.10%), Query Frame = 2 Query: 5 AENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDE 619 AE C LQGF + + ++ EY ++ L FSV+PSP++S VVEPYNA L+ H +E +D ++DNEALYDIC L + PS+ +N LI+ S +T LRF G LN DL + NL+P+PR+HF + AP+ S L+V ++T ++ N + DPR G+Y+ ++RG + K+V+E Sbjct: 133 AEQCSGLQGFLIYRSFGGGTGSGFTSLLMERLSVEYCKKIKLEFSVYPSPRISTAVVEPYNAILTTHSTIEYSDCAFMVDNEALYDICQHKLGIGRPSYASINRLIAQVSSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPITALAPIISAEKAYQEQLSVSDVTASCFEVSNQLVKCDPRLGKYMACCLLYRGDVVPKDVNE 337
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBA3_CHICK (Tubulin alpha-3 chain (Fragment) OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.353e-38 Identity = 78/204 (38.24%), Postives = 117/204 (57.35%), Query Frame = 2 Query: 5 AENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVD 616 A+ C LQGF V H + ++ EY + L FSV+P +VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S VT LRF G LN DL + NL+P+PR+HF + +A + S + L+VPE+T ++ N M DPR G+Y+ ++RG + K+V+ Sbjct: 1 ADQCSGLQGFLVFHSFGGGTGSGFTSLLMERLSVEYSKKSKLEFSVYPDRQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICNRNLDIERPTYTNLNRLIGQIVSSVTASLRFNGALNVDLIEFQTNLVPYPRIHFPLTTYARIISAEKAYHEQLSVPEITNACFEFSNQMVKCDPRRGKYMACCLLYRGDVVPKDVN 204
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBAL3_HUMAN (Tubulin alpha chain-like 3 OS=Homo sapiens GN=TUBAL3 PE=1 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 1.767e-38 Identity = 75/204 (36.76%), Postives = 114/204 (55.88%), Query Frame = 2 Query: 5 AENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVD 616 AE C LQGF + + ++ EY + L FSV+P+P++S VVEPYN+ L+ H E+ D ++DNEA+YDIC R L + PS +N L+ +S +T LRF G LN DL + NL+P+PR+HF M FAP+ S + +V ++T +++ N + DPR G+Y+ ++RG + KEV+ Sbjct: 133 AEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYPAPRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQVVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITTACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVN 336
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBAA_SCHCO (Tubulin alpha-1A chain OS=Schizophyllum commune GN=TUB-1A PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.767e-38 Identity = 74/203 (36.45%), Postives = 119/203 (58.62%), Query Frame = 2 Query: 8 ENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVD 616 +NC+ LQGF V H + ++ +Y + L FSV+P+P ++ +VVEPYN+ L+ H +E++D ++DNEA+YDIC + L ++ P +LN LI+ +S +T LRF G LN DL + NL+PFPR+HF + AP+ S + S +V E+T ++ N M DPR G+Y+ + ++RG + K+ + Sbjct: 126 DNCNGLQGFFVFHSFGGGTGSGFGALILERLSTDYGKKSKLEFSVYPAPTLASSVVEPYNSVLTTHTTLEHSDCSFMVDNEAIYDICKKNLNIAQPGLTNLNRLIAQVVSSITASLRFDGSLNVDLNEFQTNLVPFPRIHFPLATLAPIVSVDKAGHESNSVAEMTYSCFEPGNQMVKCDPRDGKYMACALLYRGDVVPKDTN 328
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBA1_EMENI (Tubulin alpha-1 chain OS=Emericella nidulans GN=tubA PE=3 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 2.308e-38 Identity = 73/202 (36.14%), Postives = 120/202 (59.41%), Query Frame = 2 Query: 5 AENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKE 610 A++C LQGF V H + ++ +Y + L F V+P+P+ + +VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PS+ +LN LI+ +S +T LRF G LN DL + NL+P+PR+HF +V ++P+ S + + +V ++T ++ N M DPR+G+Y+ ++RG + KE Sbjct: 126 ADSCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQNATSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLGIERPSYENLNRLIAQVVSSITASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVAYSPVISADKASHEANSVQDITMSCFEPNNQMVKCDPRNGKYMATCLLYRGDVVPKE 327
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBAB_SCHCO (Tubulin alpha-1B chain OS=Schizophyllum commune GN=TUB-1B PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.496e-37 Identity = 73/210 (34.76%), Postives = 121/210 (57.62%), Query Frame = 2 Query: 5 AENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 634 A+NC QG V H + ++ +Y + L F V+P+P++S +VVEPYN+ L+ H +E++D ++DNEA+YDIC + L ++ P F +LN LI+ +S +T LRF G LN DL + NL+PFPR+HF + +APL S +Q+ +V E+T +++ N M D + G+Y+ ++RG + K+ + ++ Sbjct: 124 ADNCSGRQGLFVFHSFGGGTGSGFGALLLERLSTDYGKKAKLEFCVYPAPQLSSSVVEPYNSLLTTHTTLEHSDCSFMVDNEAIYDICKKNLGVAQPGFTNLNRLIAQVVSSITASLRFDGSLNVDLNEFQTNLVPFPRIHFPLASYAPLLSAPRRQHEQNSVEEMTFSCFESGNQMVKCDAKDGKYMACCLLYRGDVVPKDTQAAVASI 333
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBA_SORMA (Tubulin alpha chain OS=Sordaria macrospora GN=TUBA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.954e-37 Identity = 73/196 (37.24%), Postives = 114/196 (58.16%), Query Frame = 2 Query: 5 AENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRG 592 A+NC LQGF V H + ++ +Y + L F V+P+P+ + +VVEPY+ L+ + +E AD ++DNEA+YDIC R L L P++ +LN LI+ +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + + +V E+T ++ N M DPRHG+Y+ ++ G Sbjct: 126 ADNCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQTATSVVEPYHNFLTTNTTLEQADCSFMVDNEAIYDICRRNLGLERPNYENLNRLIAQVVSSITASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVAYAPVISAAKAAHEANSVQEMTMSCFEPNNQMVKCDPRHGKYMATCLLYGG 321
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBA1_STYLE (Tubulin alpha-1 chain OS=Stylonychia lemnae PE=3 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.654e-36 Identity = 77/210 (36.67%), Postives = 118/210 (56.19%), Query Frame = 2 Query: 5 AENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 634 A+ C LQGF V + + ++ +Y + L F+V+PSP+VS VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R L + P++ +LN LI+ +S +T LRF G LN D+ + NL+P+P V P T + L+V E+T ++ +MM DPRHG+Y+ M+RG + K+V+ + + Sbjct: 126 ADQCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYP-----SVIIRPSTPAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATI 330
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBA1_ENTHI (Tubulin alpha-1 chain OS=Entamoeba histolytica GN=TUB1 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.321e-35 Identity = 74/204 (36.27%), Postives = 120/204 (58.82%), Query Frame = 2 Query: 8 ENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADP-RHGRYLTASAMFRGKMSTKEVD 616 ENC LQGF + + K+ ++Y + L ++PSPK+S VVEPYNA L+ H +++ + ++DNE++Y IC + L + +PS+ LN LI+ MS +T LRF G LN DL + NL+PFPR HF M+ +AP+ + ++L+V ELT ++D ++M D G++++ M+RG +S++EV+ Sbjct: 132 ENCTGLQGFFIYNSVGGGTGSGFTAALCEKLADKYTKKTKLNTVIWPSPKLSSGVVEPYNAVLNTHAMMKFVNCTFMVDNESIYKICQKQLGVHSPSYFHLNQLIAQAMSSITASLRFEGTLNVDLNEFPTNLVPFPRDHFAMMSYAPIVTPEKAIRQTLSVQELTSSLFDPNSLMIQCDDINKGKFMSCCMMYRGDVSSREVN 335 The following BLAST results are available for this feature:
BLAST of CF417095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417095 ID=CF417095; Name=CF417095; organism=Citrus sinensis; type=EST; length=635bpback to top |