CF417095
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG1_MAIZE (Tubulin gamma-1 chain OS=Zea mays GN=TUBG1 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.227e-31 Identity = 76/215 (35.35%), Postives = 118/215 (54.88%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRSLTVPELTQQMWDAKNMMCAADPR-----HGRYLTASAMFRGKMSTKEVDEQM 625 EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL I L LS P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G+ PLT R R TV ++ +++ KN+M ++ R +Y++ + +G++ +V E + Sbjct: 125 EADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQVETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESL 339
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG2_ARATH (Tubulin gamma-2 chain OS=Arabidopsis thaliana GN=TUBG2 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.602e-31 Identity = 75/215 (34.88%), Postives = 120/215 (55.81%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRSLTVPELTQQMWDAKNMMCAADPRH-----GRYLTASAMFRGKMSTKEVDEQM 625 EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL I L L+ P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G+ PLT R + R TV ++ +++ KN+M ++ R+ +Y++ + +G++ +V E + Sbjct: 125 EADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESL 339
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG1_CANFA (Tubulin gamma-1 chain OS=Canis familiaris GN=TUBG1 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.602e-31 Identity = 71/180 (39.44%), Postives = 107/180 (59.44%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS-QQYRSLTVPELTQQMWDAKNMM 535 EA+ D L+GF +CH + ++ + YP +++ T+SVFP+ ++SD VV+PYN+ L++ +L +NAD +VLDN L I L + PSF +N L+S MS T LR+PG +N+DL L +LIP PRLHF M G+ PLT+ S R TV ++ +++ KN+M Sbjct: 125 EADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTTLNRIATNRLHIQNPSFFQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVM 304
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG2_ORYSJ (Tubulin gamma-2 chain OS=Oryza sativa subsp. japonica GN=TUBG2 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.092e-31 Identity = 75/215 (34.88%), Postives = 119/215 (55.35%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRSLTVPELTQQMWDAKNMMCAADPRH-----GRYLTASAMFRGKMSTKEVDEQM 625 EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL I L L+ P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G+ PLT R R TV ++ +++ KN+M ++ R+ +Y++ + +G++ +V E + Sbjct: 125 EADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESL 339
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG1_ARATH (Tubulin gamma-1 chain OS=Arabidopsis thaliana GN=TUBG1 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.092e-31 Identity = 75/215 (34.88%), Postives = 120/215 (55.81%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRSLTVPELTQQMWDAKNMMCAADPRH-----GRYLTASAMFRGKMSTKEVDEQM 625 EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL I L L+ P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G+ PLT R + R TV ++ +++ KN+M ++ R+ +Y++ + +G++ +V E + Sbjct: 125 EADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESL 339
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG1_XENLA (Tubulin gamma-1 chain OS=Xenopus laevis GN=tubg1 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.733e-31 Identity = 71/180 (39.44%), Postives = 107/180 (59.44%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGS-QQYRSLTVPELTQQMWDAKNMM 535 EA+ D L+GF +CH + ++ + YP +++ T+SVFP+ ++S VV+PYN+ L++ +L +NAD +VLDN AL I L + PSF +N L+S MS T LR+PG +N+DL L +LIP PRLHF M G+ PLT+ S R TV ++ +++ KN+M Sbjct: 125 EADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSHVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVM 304
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG1_DROME (Tubulin gamma-1 chain OS=Drosophila melanogaster GN=gammaTub23C PE=1 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 2.733e-31 Identity = 77/218 (35.32%), Postives = 122/218 (55.96%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRG---SQQ---YRSLTVPELTQQMWDAKNMMCAADP---RHGRYLTASAMFRGKMSTKEVDEQM 625 EA+ D L+GF +CH + ++ + YP +++ TFSVFP+ ++SD VV+PYN+ L++ +L AD +VLDN AL I L + PSF +N+L+S MS T LR+P +N++L L LIP P+LHF M G+ PLTS +QQ R TV ++ +++ KNMM + P H Y++ + +G++ +V + + Sbjct: 125 EADGSDSLEGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYNSMLTLKRLTTAADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAPLIPTPQLHFLMTGYTPLTSDSDIHTQQLVNVRKTTVLDVMRRLLQPKNMMVSTGPDKSNHHCYISILNIIQGEVDPTQVHKSL 342
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG_PHYPA (Tubulin gamma chain OS=Physcomitrella patens GN=TUBG1 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.088e-31 Identity = 74/215 (34.42%), Postives = 119/215 (55.35%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRSLTVPELTQQMWDAKNMMCAADPR-----HGRYLTASAMFRGKMSTKEVDEQM 625 EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL I L + P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G+ PLT R + R TV ++ +++ AKN+M ++ R +Y++ + +G++ +V + + Sbjct: 125 EADGSDSLEGFVLCHSIAGGTGSGMGSYLLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVDRLHIPNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLVASLIPTPRCHFLMTGYTPLTVERQANAIRKTTVLDVMRRLLQAKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHKSL 339
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG1_EUPCR (Tubulin gamma-1 chain OS=Euplotes crassus PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.038e-30 Identity = 70/210 (33.33%), Postives = 116/210 (55.24%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT--SRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM 625 EA+ D L+GF + H + ++ + YP +++ T+SVFP+ +D VV+PYN LS+ +L+ NAD +VLDN AL I LKL P+F +N ++S M+ T LR+PG +N+DL L +L+P PR HF M G+ PL+ + R TV ++ +++ KN+M + G Y++ + +G + +V + + Sbjct: 125 EADGSDSLEGFVLTHSIAGGTGSGFGSYLLERLNDHYPKKLIQTYSVFPNE--NDVVVQPYNCLLSMKRLILNADCVVVLDNTALTSIAVDRLKLLQPTFPQINSIVSTVMAASTTTLRYPGYMNNDLVGLIASLVPTPRCHFLMTGYTPLSLIDQKVTSVRKTTVLDVMRRLLQTKNIMATGAIKKGAYMSILNIIQGDVDPTQVHKSL 332
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG_USTVI (Tubulin gamma chain OS=Ustilago violacea GN=TUB4 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.356e-30 Identity = 72/217 (33.18%), Postives = 113/217 (52.07%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQ---YRSLTVPELTQQMWDAKN---MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 634 EAE D L+GF + H + ++ + YP +++ T+SVFP D VV+PYN+ LS+ +L +AD +VLDN AL IC L + SF N L+S MS T LR+PG +N+DL + +LIP PR HF + P TS +Q R TV ++ +++ KN M RH Y++ + +G++ +V + ++ + Sbjct: 125 EAEGSDSLEGFMLLHSIAGGTGSGLGSYLLERMNDRYPKKLIQTYSVFPDADSGDVVVQPYNSLLSMKRLTNHADSVIVLDNAALSKICQDRLHVQVASFAQTNQLVSTVMSASTQTLRYPGYMNNDLVGMIASLIPTPRCHFLTTSYTPFTSDKIEQAKAVRKTTVLDVMRRLLQPKNRLVSMPTTPSRHACYISILNIIQGEVDPTDVHKSLLRI 341 The following BLAST results are available for this feature:
BLAST of CF417095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417095 ID=CF417095; Name=CF417095; organism=Citrus sinensis; type=EST; length=635bpback to top |