CF417095
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG_COPC7 (Tubulin gamma chain OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=TUB4 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.771e-30 Identity = 70/215 (32.56%), Postives = 119/215 (55.35%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS---RGSQQYRSLTVPELTQQMWDAKNMMCAADP-RHGRYLTASAMFRGKMSTKEVDEQMINV 634 EAE D L+GF V H + ++ +++P +++ T+SVFP+ + D VV+PYN+ L++ +LV +AD +VLDN AL I L + TPSF N L+S ++ T LR+PG +N+DL + +LIP PR HF M + P TS ++ R TV ++ +++ KN M P + Y++ + +G++ +V + ++ + Sbjct: 125 EAEGSDSLEGFMVMHSIAGGTGSGLGSFLLERLNDKFPKKLIQTYSVFPNAQEGDVVVQPYNSLLALKRLVNHADSVVVLDNGALARISADRLHVQTPSFDQTNQLVSTVIAASTQTLRYPGYMNNDLVGIIASLIPTPRCHFLMTSYTPFTSDQIDKAKTIRRTTVLDVMRRLLQPKNRMVLTTPSKTACYISILNIIQGEVDPTDVHQSLLRI 339
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG1_EUPOC (Tubulin gamma-1 chain OS=Euplotes octocarinatus PE=2 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 2.313e-30 Identity = 68/209 (32.54%), Postives = 114/209 (54.55%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM 625 EA+ D L+GF + H + ++ + YP +++ T+SVFP +D VV+PYN LS+ +L NAD +VLDN AL I LK+ P+F +N ++S M+ T LR+PG +N+D+ L +L+P PR HF M G+ PL+ + R TV ++ +++ KN+M + G Y++ + +G + +V + + Sbjct: 125 EADGSDSLEGFVLTHSIAGGTGSGFGSYLLERLNDHYPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAASTTTLRYPGYMNNDMVGLIASLVPTPRCHFLMTGYTPLSLDQKFNSVRKTTVLDVMRRLLQTKNIMVTGAVKKGAYMSILNVIQGDVDPTQVHKSL 331
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG2_EUPOC (Tubulin gamma-2 chain OS=Euplotes octocarinatus PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.021e-30 Identity = 68/209 (32.54%), Postives = 114/209 (54.55%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM 625 EA+ D L+GF + H + ++ + YP +++ T+SVFP +D VV+PYN LS+ +L NAD +VLDN AL I LK+ P+F +N ++S M+ T LR+PG +N+D+ L +L+P PR HF M G+ PL+ + R TV ++ +++ KN+M + G Y++ + +G + +V + + Sbjct: 125 EADGSDSLEGFVLTHSIAGGTGSGFGSYLLERLNDHYPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAASTTTLRYPGYMNNDMVGLIASLVPTPRCHFLMTGYTPLSLDQKFTSVRKTTVLDVMRRLLQTKNIMVTGAVKKGAYMSILNVIQGDVDPTQVHKSL 331
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG_EUPAE (Tubulin gamma chain OS=Euplotes aediculatus PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.153e-30 Identity = 70/211 (33.18%), Postives = 115/211 (54.50%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY---RSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM 625 EA+ D L+GF + H + +I + YP +++ T+SVFP +D VV+PYN LS+ +L NAD +VLDN AL I LK+ P+F +N ++S M+ T LR+PG +N+D+ L +L+P PR HF M G+ PL+ Q+Y R T ++ +++ KN+M + G Y++ + +G + +V + + Sbjct: 125 EADGSDSLEGFVLTHSIAGGTGSGFGSYLLERINDHYPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAASTTTLRYPGYMNNDMVGLIASLVPTPRCHFLMTGYTPLSL--DQKYTSVRKTTFLDVMRRLLQTKNIMVTGAVKKGAYMSILNVIQGDVDPTQVHKSL 331
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG_CHLRE (Tubulin gamma chain OS=Chlamydomonas reinhardtii GN=TUBG PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.153e-30 Identity = 73/219 (33.33%), Postives = 118/219 (53.88%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRG-----SQQYRSLTVPELTQQMWDAKNMMCAA-----DPRHGRYLTASAMFRGKMSTKEVDEQM 625 EAE CD L+GF +CH + I + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L +AD +VLDN AL I L L P +N LI+ M+ T LR+PG +N+DL L +LIP PR HF M G+ PLT+ + R TV ++ +++ KN+M + D + +Y++ + +G++ +V + + Sbjct: 125 EAEYCDSLEGFNMCHSIAGGTGSGMGSYMLELISDRYSKKLIQTYSVFPNQSESSDVVVQPYNSLLTLKRLTLHADAVVVLDNTALDKIAVERLHLHKPDVQQINSLIATVMAASTTTLRYPGYMNNDLVGLVASLIPTPRCHFLMTGYTPLTAENAAGQVTSNIRKTTVLDVMRRLLQPKNIMVSTHTKSRDIANAKYISILNIIQGEVDPSQVHKSL 343
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG2_EUPCR (Tubulin gamma-2 chain OS=Euplotes crassus PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.153e-30 Identity = 69/210 (32.86%), Postives = 116/210 (55.24%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ--QYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM 625 EA+ D L+GF + H + K+ + YP +++ T+SVFP+ +D VV+PYN LS+ +LV NAD +VLDN A+ I LKL P+ +N ++S M+ T LR+PG +N+DL L +L+P PR HF M G+ PL+ + R TV ++ +++ +N+M + + G Y++ + +G + +V + + Sbjct: 125 EADGSDSLEGFVLTHSIAGGTGSGFGSYLLEKLNDHYPKKLVQTYSVFPND--NDIVVQPYNCILSMKRLVLNADCVVVLDNTAITSIAVDRLKLLHPTISQVNSIVSTVMAASTTTLRYPGYMNNDLVGLIASLVPTPRCHFLMTGYTPLSLNDQKVSSIRKTTVLDVMRRLLQTRNIMTSGAIKKGAYMSILNIIQGDVDPTQVHKSL 332
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG_SCHJP (Tubulin gamma chain OS=Schizosaccharomyces japonicus GN=tug1 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 6.731e-30 Identity = 69/216 (31.94%), Postives = 120/216 (55.56%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPK-VSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSL---TVPELTQQMWDAKNMMCAADP-RHGRYLTASAMFRGKMSTKEVDEQMINV 634 EAE D L+GF + H + ++ + +P +++ T+SVFP+ + VSD VV+PYN+ L++ +L NAD +VLDN AL I L + P+F N L+S MS T LR+PG +N+DL + +LIP PR HF + P TS+ + R++ TV ++ +++ KN M + +P + +++ + +G+ +V + ++ + Sbjct: 125 EAEGSDSLEGFSLLHSIAGGTGSGLGSYLLERLNDRFPKKIVQTYSVFPNNRSVSDVVVQPYNSLLTLKRLTLNADAVVVLDNAALAHIAADRLHIQNPTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASLIPTPRCHFLSTSYTPFTSQQVEDARTIRKTTVLDVMRRLLQPKNRMVSVNPGKQSCFISILNIIQGEADPNDVHKSLLRI 340
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG2_DROME (Tubulin gamma-2 chain OS=Drosophila melanogaster GN=gammaTub37C PE=1 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 6.731e-30 Identity = 69/184 (37.50%), Postives = 108/184 (58.70%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS--RGSQQYRSLTVPELTQQMWDAKNMMCAA 544 EA+ D L+GF +CH + ++ E +P +++ T+SVFP+ ++SD VV+PYN+ L++ +L + AD +VLDN AL I L + TP+F +N+L+S MS T LR+P +N++L L +LIP P+LHF M G+ PL S R TV ++ +++ KNMM +A Sbjct: 125 EADGSDSLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRLTKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASLIPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSA 308
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG_ANEPH (Tubulin gamma chain OS=Anemia phyllitidis GN=TUBG PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 8.790e-30 Identity = 74/216 (34.26%), Postives = 120/216 (55.56%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQ-LVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRSLTVPELTQQMWDAKNMMCAADPR-----HGRYLTASAMFRGKMSTKEVDEQM 625 EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++++ L NAD +VLDN AL I L + P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G+ PLT R + R TV ++ +++ AKN+M ++ R +Y++ + +G++ +V + + Sbjct: 125 EADGSDSLEGFVLCHSIAGGTGSGMGSYLLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLNKRLTINADCVVVLDNTALNRIAVDRLHIPNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLVASLIPTPRCHFLMTGYTPLTVERQANAIRKTTVLDVMRRLLQAKNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHKSL 340
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG_SCHPO (Tubulin gamma chain OS=Schizosaccharomyces pombe GN=tug1 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.558e-29 Identity = 69/216 (31.94%), Postives = 118/216 (54.63%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFP-SPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQ---YRSLTVPELTQQMWDAKNMMCAADP-RHGRYLTASAMFRGKMSTKEVDEQMINV 634 EA+ D L+GF + H + ++ + YP +++ T+SVFP S VSD VV+PYN+ L++ +L NAD +VLDN AL I L P+F N L+S MS T LR+PG +N+DL + +LIP PR HF + + P T++ ++ R TV ++ +++ KN M + +P + +++ + +G+ +V + ++ + Sbjct: 125 EADGSDSLEGFSLLHSIAGGTGSGLGSFLLERLNDRYPKKIIQTYSVFPNSQSVSDVVVQPYNSLLALKRLTLNADSVVVLDNAALAHIAADRLHTQNPTFHQQNQLVSTVMSASTTTLRYPGYMNNDLVSIIASLIPSPRCHFLLTSYTPFTNQQVEEAKAIRKTTVLDVMRRLLLPKNQMVSVNPSKKSCFISILDIIQGEADPADVHKSLLRI 340 The following BLAST results are available for this feature:
BLAST of CF417095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417095 ID=CF417095; Name=CF417095; organism=Citrus sinensis; type=EST; length=635bpback to top |