CF417095
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBE_HUMAN (Tubulin epsilon chain OS=Homo sapiens GN=TUBE1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.775e-22 Identity = 62/229 (27.07%), Postives = 111/229 (48.47%), Query Frame = 2 Query: 5 AENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR------------TLK---LSTPSFGDL-----------NHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEV 613 AE+CDCLQ F + H + + +E+P+ S++PS + D + PYN+ L++ +L E+AD + +DN++L+DI + T+K L T S G L N++++ + +T RF G LN DL ++++NL+PFP+LH+ + PL + + ++ + + + ADP+H YL + M RG + ++ Sbjct: 132 AEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTSIYPSGE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTTVKPKSLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLHYLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNVQISDL 359
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG_ENCCU (Tubulin gamma chain OS=Encephalitozoon cuniculi GN=TUB4 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.028e-22 Identity = 52/151 (34.44%), Postives = 88/151 (58.28%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPS-PKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP 451 EAE CD L+ F + H + +I+EE+P +++ T+S+FP+ + SD VV+PYN+ L++H+L+EN+D +V+DN +L +L++ TP+F +N LIS M+ T +RFPG + + + L+P L F + + P Sbjct: 118 EAEGCDALETFLLLHSIAGGTGSGFGSLLLERIKEEFPKKIVQTYSIFPNNDESSDVVVQPYNSVLTLHRLIENSDCIVVMDNSSLGRYTLDSLRIGTPTFDHINLLISTVMAASTSTIRFPGYMYCTHQSINNCLVPLDPLKFVVPSYTP 268
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBA_OCTVU (Tubulin alpha chain (Fragment) OS=Octopus vulgaris PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.028e-22 Identity = 48/124 (38.71%), Postives = 73/124 (58.87%), Query Frame = 2 Query: 263 ICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 634 IC R L + PS+ +LN LIS +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + + Sbjct: 1 ICKRNLDIERPSYTNLNRLISQVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLAVAEVTSACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATI 124
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBE_MOUSE (Tubulin epsilon chain OS=Mus musculus GN=Tube1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.165e-22 Identity = 57/229 (24.89%), Postives = 105/229 (45.85%), Query Frame = 2 Query: 5 AENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR--------------------------TLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEV 613 AE CDCLQ F + H + + +E+P+ +V+PS + D + PYN+ L++ +L E+AD + +DN++L+DI + K F +N++++ + +T RF G LN DL ++++NL+PFP+LH+ + PL + + ++ + + + ADPRH YL + + RG + ++ Sbjct: 132 AEQCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTAVYPSSE-DDVITSPYNSMLAMKELNEHADCVLPIDNQSLFDIISKIDLVVNSGKLGSAVKPKSLITSNMGAVKKHHKKPFDAMNNIVANLLLSLTSSARFEGSLNMDLNEISMNLVPFPKLHYLVSSLTPLYTLADVNIPPRRLDQMFSDAFSKDHQLIQADPRHSLYLACALIVRGNVQISDL 359
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBA4B_HUMAN (Putative tubulin-like protein alpha-4B OS=Homo sapiens GN=TUBA4B PE=5 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 5.165e-22 Identity = 53/148 (35.81%), Postives = 82/148 (55.41%), Query Frame = 2 Query: 5 AENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI-------PFPRLH 427 A+ C LQGF V H + + Y + L FS++P+P+VS +V+PYN+ L+ H +E++D ++DN+A+YDIC L + P++ +LN LIS +S +T LRF G LN DL + NL+ P+P +H Sbjct: 65 ADQCTGLQGFLVFHSLGRGTGSDVTSFLMEWLSVNYGKKSKLGFSIYPAPQVSTAMVQPYNSILTTHTTLEHSDCAFMVDNKAIYDICHCNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVSYLTSTSPWPPMH 212
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG_CANGA (Tubulin gamma chain OS=Candida glabrata GN=TUB4 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.811e-22 Identity = 58/181 (32.04%), Postives = 91/181 (50.28%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR---GSQQYRSLTVPELTQQMWDAKNMM 535 E ++ D +GFQ+ H + + + Y + T+SVFPS K S+ VV PYN L++ +L E+AD ++ DN AL ++ RT + S+ N LIS+ +S +T LRFP + + + + LIP P LHF F P T G Q+Y+ T ++ + D N + Sbjct: 127 ELDSTDNFEGFQLLHSVAGGTGSGLGSSLLEALTDRYSKSFITTYSVFPS-KQSEVVVGPYNTVLTLRRLCEDADASIIFDNNALLNLTARTFRDPNTSYEHTNQLISSALSSITNSLRFPSYMYNSMASIFSTLIPTPELHFLTPNFTPFTPDYIIGGQRYKKNTAYDVLLDLLDPFNSL 306
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG_CAEEL (Tubulin gamma chain OS=Caenorhabditis elegans GN=tbg-1 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.272e-20 Identity = 59/185 (31.89%), Postives = 92/185 (49.73%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVS-DTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPR 553 EAEN + L G H + ++RE +P +++ T+SVF + S D VV PYN LS+ +L+EN D +VLDN AL+ + K TP+F +N L++ MS T RF + +R L +L PFP +HF +P+ R +V ++T+ + +MM + R Sbjct: 127 EAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTAPYRFNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKPTSMMVSTASR 309
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG_YEAST (Tubulin gamma chain OS=Saccharomyces cerevisiae GN=TUB4 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.118e-19 Identity = 49/153 (32.03%), Postives = 80/153 (52.29%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 460 E ++ D +GFQ+ H + + + YP +++ T+SVFP+ + S+ VV+ YN L++ +L+E++D +V DN +L +I + + N LIS +S VT +RFP + S + + LIP P LHF F P TS Sbjct: 126 EIDSTDNFEGFQLLHSVAGGTGSGLGSNLLEALCDRYPKKILTTYSVFPA-RSSEVVVQSYNTILALRRLIEDSDATVVFDNASLLNISGKVFRNPNIDLQHTNQLISTIISSVTNSIRFPSYMYSSMSSIYSTLIPSPELHFLSPSFTPFTS 277
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBG_CANAL (Tubulin gamma chain OS=Candida albicans GN=TUB4 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.177e-14 Identity = 52/163 (31.90%), Postives = 79/163 (48.47%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMML-TFSVFPSPK-VSDTVVEPYNATLSVHQLVENADECMVLDNEALY---DICFRTLKLSTPSFGDL----NHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR 463 E + CD L FQ+ H + I + Y + +L TFS+FPS + SD VV+PYN L++ +L++ +D V N++L +I F DL N LI+ + V+ LRFPG + S + + NLIP P L F AP +++ Sbjct: 152 EVDKCDNLSNFQLFHSVAGGTGSGVGSKMLEVISDRYGHKKLLNTFSIFPSNEDTSDVVVQPYNTILTLKRLIDYSDATFVFHNDSLNRIENILFNNNSNIQHDDNDLFLGANKLIALVSASVSNPLRFPGYMYSSMESIVSNLIPTPDLKFLTSSIAPFSTQ 314 The following BLAST results are available for this feature:
BLAST of CF417095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417095 ID=CF417095; Name=CF417095; organism=Citrus sinensis; type=EST; length=635bpback to top |