CF417095
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBB_EIMTE (Tubulin beta chain OS=Eimeria tenella PE=2 SV=1) HSP 1 Score: 360.533 bits (924), Expect = 3.999e-99 Identity = 173/211 (81.99%), Postives = 189/211 (89.57%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 634 EAE CDCLQGFQV H ISK+REEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE V+DNEALYDICFRTLKL+TP++GDLNHL+SA MSGVTC LRFPGQLNSDLRKLAVNL+PFPRLHFF++GFAPLTSRGSQQYR+LTVPELTQQM+DAKNMMCA+DPRHGRYLTA A+FRG+MSTKEVDEQM+NV Sbjct: 123 EAEGCDCLQGFQVTHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCSLRFPGQLNSDLRKLAVNLVPFPRLHFFLIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCASDPRHGRYLTACALFRGRMSTKEVDEQMLNV 333
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBB_PLAFA (Tubulin beta chain OS=Plasmodium falciparum PE=3 SV=1) HSP 1 Score: 360.147 bits (923), Expect = 5.223e-99 Identity = 175/211 (82.94%), Postives = 187/211 (88.63%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 634 EAE CDCLQGFQ+ H ISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE V+DNEALYDICFRTLKL+TP++GDLNHL+SA MSGVTC LRFPGQLNSDLRKLAVNLIPFPRLHFFM GFAPLTSRGSQQYR+LTVPELTQQM+DAKNMMC +DPRHGRYLTA AMFRG+MSTKEVDEQM+NV Sbjct: 123 EAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMYGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCTSDPRHGRYLTACAMFRGRMSTKEVDEQMLNV 333
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBB_TRYBR (Tubulin beta chain OS=Trypanosoma brucei rhodesiense PE=3 SV=1) HSP 1 Score: 359.762 bits (922), Expect = 6.821e-99 Identity = 170/211 (80.57%), Postives = 190/211 (90.05%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 634 EAE+CDCLQGFQ+CH ISK+RE+YPDR+M+TFS+ PSPKVSDTVVEPYN TLSVHQLVEN+DE M +DNEALYDICFRTLKL+TP+FGDLNHL+SA +SGVTCCLRFPGQLNSDLRKLAVNL+PFPRLHFFM+GFAPLTSRGSQQYR L+VPELTQQM+DAKNMM AADPRHGRYLTASA+FRG+MSTKEVDEQM+NV Sbjct: 123 EAESCDCLQGFQICHSLGGGTGSGMGTLLISKLREQYPDRIMMTFSIIPSPKVSDTVVEPYNTTLSVHQLVENSDESMCIDNEALYDICFRTLKLTTPTFGDLNHLVSAVVSGVTCCLRFPGQLNSDLRKLAVNLVPFPRLHFFMMGFAPLTSRGSQQYRGLSVPELTQQMFDAKNMMQAADPRHGRYLTASALFRGRMSTKEVDEQMLNV 333
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBB_EUPFO (Tubulin beta chain OS=Euplotes focardii PE=3 SV=1) HSP 1 Score: 359.377 bits (921), Expect = 8.909e-99 Identity = 174/211 (82.46%), Postives = 189/211 (89.57%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 634 EAE CDCLQGFQ+ H ISKIRE+YPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE M +DNEALYDICFRTLK +TP++GDLNHL+SA +SGVT CLRFPGQLNSDLRKLAVNLIPFPRLHFFM+GFAPLTSRGSQQYR+LTVPELTQQM+DAKNMMCA+DPRHGRYLTASAMFRG+MSTKEVDEQM+NV Sbjct: 123 EAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREKYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMCIDNEALYDICFRTLKPTTPTYGDLNHLVSAVISGVTSCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCASDPRHGRYLTASAMFRGRMSTKEVDEQMLNV 333
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBB1_DAUCA (Tubulin beta-1 chain (Fragment) OS=Daucus carota GN=TUBB1 PE=1 SV=2) HSP 1 Score: 358.607 bits (919), Expect = 1.520e-98 Identity = 178/201 (88.56%), Postives = 183/201 (91.04%), Query Frame = 2 Query: 32 FQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 634 FQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENAD CMVLDNEALYDICFRTLKL+TPSFGDLNHLISATMSGVTC LRFPGQLNSDLRKLAV LIPFPRLHFFMVGFAPLTSRGSQQYRSL+VPELTQQMWD+KNMMCAADPRHGRYLTASAMFR KMSTK++DEQMINV Sbjct: 1 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADVCMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVILIPFPRLHFFMVGFAPLTSRGSQQYRSLSVPELTQQMWDSKNMMCAADPRHGRYLTASAMFREKMSTKDLDEQMINV 201
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBB1_PHYPO (Tubulin beta-1 chain OS=Physarum polycephalum GN=BETA PE=1 SV=4) HSP 1 Score: 356.681 bits (914), Expect = 5.774e-98 Identity = 174/211 (82.46%), Postives = 187/211 (88.63%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 634 EAE+CDCLQGFQ+ H ISKIREEYPDRMM TFSV PSPKVSDTVVEPYNATLSVHQLVENADE M +DNEALYDI FRTLKL+TP++GDLNHL+SA MSG+TCCLRFPGQLNSDLRKLAVNLIPFPRLHFF+VGFAPLTSRGS YRSLTVPELTQQM+DAKNMM A+DPRHGRYLTASAMFRG+MSTKEVDEQM+NV Sbjct: 123 EAESCDCLQGFQIAHSLGGGTGSGMGTLLISKIREEYPDRMMCTFSVVPSPKVSDTVVEPYNATLSVHQLVENADEVMCIDNEALYDISFRTLKLTTPTYGDLNHLVSAVMSGITCCLRFPGQLNSDLRKLAVNLIPFPRLHFFLVGFAPLTSRGSVGYRSLTVPELTQQMFDAKNMMAASDPRHGRYLTASAMFRGRMSTKEVDEQMLNV 333
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBB_TRYCR (Tubulin beta chain OS=Trypanosoma cruzi PE=3 SV=2) HSP 1 Score: 354.755 bits (909), Expect = 2.194e-97 Identity = 167/211 (79.15%), Postives = 189/211 (89.57%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 634 EAE+CDCLQGFQ+CH ISK+REEYPDR+M+TFS+ PSPKVSDTVVEPYN TLSVHQLVEN+DE M +DNEALYDICFRTLKL+TP+FGDLNHL+SA +SGVTCCLRFPGQLNSDLRKLAVNL+PFPRLHFFM+GFAPL+SRGSQQYR L+VP++TQQM+DAKNMM AADP HGRYLTASA+FRG+MSTKEVDEQM+NV Sbjct: 123 EAESCDCLQGFQICHSLGGGTGSGMGTLLISKLREEYPDRIMMTFSIIPSPKVSDTVVEPYNTTLSVHQLVENSDESMCIDNEALYDICFRTLKLTTPTFGDLNHLVSAVVSGVTCCLRFPGQLNSDLRKLAVNLVPFPRLHFFMMGFAPLSSRGSQQYRGLSVPDVTQQMFDAKNMMQAADPAHGRYLTASALFRGRMSTKEVDEQMLNV 333
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBB4_OOMCK (Tubulin beta-4 chain OS=Oomycete-like sp. (strain MacKay2000) GN=TUBB4 PE=3 SV=1) HSP 1 Score: 352.829 bits (904), Expect = 8.338e-97 Identity = 173/211 (81.99%), Postives = 185/211 (87.68%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 634 EAE CDCLQGFQV H ISKIREEYPDR+M+TFSV PSPKVSDTVVEPYNATLSVHQLVENADE MVLDNEALYDICFRTLKL+TP++GDLNHL+ MSGVT LRFPGQLN+DLRKLAVNLIPFPRLHFFM+GFAPLTSRGSQQYR+LTVPELT Q +DAKNMMCAADPRHGRYLTAS MFRG+MSTKEVDEQM+NV Sbjct: 123 EAEQCDCLQGFQVTHSLGGGTGSGMGTLLISKIREEYPDRVMMTFSVCPSPKVSDTVVEPYNATLSVHQLVENADEVMVLDNEALYDICFRTLKLTTPTYGDLNHLVCVCMSGVTSSLRFPGQLNADLRKLAVNLIPFPRLHFFMLGFAPLTSRGSQQYRALTVPELTSQCFDAKNMMCAADPRHGRYLTASCMFRGRMSTKEVDEQMLNV 333
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBB_THAWE (Tubulin beta chain OS=Thalassiosira weissflogii PE=2 SV=1) HSP 1 Score: 348.977 bits (894), Expect = 1.204e-95 Identity = 164/211 (77.73%), Postives = 185/211 (87.68%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 634 EAE+CDC+QGFQ+ H ISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVENAD+C LDNEALYDICFRTLKL+TP++GDLNHLI+A + G TCCLRFPGQLN DLRKLAVN++PFPRLHFFMVG+APLTSRGSQQYR+LTVPELTQQ +DAKNMMCAADPRHGRYLT + +FRG+MS+KEVDEQM+NV Sbjct: 123 EAESCDCMQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFALDNEALYDICFRTLKLTTPTYGDLNHLIAAAVCGTTCCLRFPGQLNCDLRKLAVNMVPFPRLHFFMVGYAPLTSRGSQQYRALTVPELTQQCFDAKNMMCAADPRHGRYLTCAVLFRGRMSSKEVDEQMLNV 333
BLAST of CF417095 vs. ExPASy Swiss-Prot
Match: TBB_BABBO (Tubulin beta chain OS=Babesia bovis PE=3 SV=1) HSP 1 Score: 348.977 bits (894), Expect = 1.204e-95 Identity = 170/208 (81.73%), Postives = 184/208 (88.46%), Query Frame = 2 Query: 2 EAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQM 625 EAE CDCLQGFQ+ H ISKIREEYPDR+M TFSVFPSPKVSDTVVEPYNATLSVHQLVENADE V+DNEALYDICFRTLKL+TP++GDLNHL+SA MSGVTC LRFPGQLNSDLRKLAVNLIPFPRLHFFM+GFAPLTSRGSQQ+R+L+V ELTQQM+DAKNMMCA+DPR GRYLTA AMFRG+MSTKEVDEQM Sbjct: 123 EAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQHRALSVAELTQQMFDAKNMMCASDPRRGRYLTACAMFRGRMSTKEVDEQM 330 The following BLAST results are available for this feature:
BLAST of CF417095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417095 ID=CF417095; Name=CF417095; organism=Citrus sinensis; type=EST; length=635bpback to top |