CF417141

Overview
NameCF417141
Unique NameCF417141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: AL2C4_ARATH (Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2)

HSP 1 Score: 63.5438 bits (153), Expect = 2.531e-21
Identity = 40/91 (43.96%), Postives = 53/91 (58.24%), Query Frame = 3
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLILSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIM-AAAAPMVKPVSL 626
            K  PA+AAGC  ++KP+E  S++ L  A   KE G      L +   +   AGA + SH  VDK++FTGS   G +IM AAAA  +K VSL
Sbjct:  178 KVAPAMAAGCTMVVKPAEQTSLSALFYAHLSKEAGIP-DGVLNIVTGFGSTAGAAIASHMDVDKVSFTGSTDVGRKIMQAAAASNLKKVSL 267          

HSP 2 Score: 58.9214 bits (141), Expect = 2.531e-21
Identity = 38/103 (36.89%), Postives = 53/103 (51.46%), Query Frame = 1
Query:   37 WSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVW-DIDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYPSI 342
            W   +G  RAK +   A  I E   ELA L+ +D GK  +   + DI   AG F Y A  A+ +  +    + +  ++   Y LKEPI G+ G I PWN+PSI
Sbjct:   75 WPRMTGFERAKLINKFADLIEENIEELAKLDAVDGGKLFQLGKYADIPATAGHFRYNAGAADKIHGE---TLKMTRQSLFGYTLKEPI-GVVGNIIPWNFPSI 173          
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: BETB_BURCH (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain HI2424) GN=betB PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 2.532e-21
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 3
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLILSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMA-AAAPMVKPVSL 626
            K  PALAAG A + KPSE+  +T L+LAE   E G     F ++  D     GA L  HP + K++FTG   TG ++M+ A A  +K V++
Sbjct:  162 KTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGD--GSVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTM 250          

HSP 2 Score: 58.9214 bits (141), Expect = 2.532e-21
Identity = 42/113 (37.17%), Postives = 60/113 (53.10%), Query Frame = 1
Query:    4 RQALSRNKG-KDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            R   S  +G ++W++ +   R++ LR     + ER  ELA +ET D GKP+ E +  DI   A   EYYA LA  ++  Q   V L  E+F  Y  +EP+ G+   I  WNYP
Sbjct:   48 RAVASAQEGQREWAAMTAMQRSRILRRAVELLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQ---VPLRAESF-VYTRREPL-GVCAGIGAWNYP 155          
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: BETB_BURCA (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=betB PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 2.532e-21
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 3
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLILSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMA-AAAPMVKPVSL 626
            K  PALAAG A + KPSE+  +T L+LAE   E G     F ++  D     GA L  HP + K++FTG   TG ++M+ A A  +K V++
Sbjct:  162 KTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGD--GSVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTM 250          

HSP 2 Score: 58.9214 bits (141), Expect = 2.532e-21
Identity = 42/113 (37.17%), Postives = 60/113 (53.10%), Query Frame = 1
Query:    4 RQALSRNKG-KDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            R   S  +G ++W++ +   R++ LR     + ER  ELA +ET D GKP+ E +  DI   A   EYYA LA  ++  Q   V L  E+F  Y  +EP+ G+   I  WNYP
Sbjct:   48 RAVASAQEGQREWAAMTAMQRSRILRRAVELLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQ---VPLRAESF-VYTRREPL-GVCAGIGAWNYP 155          
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: BETB_BURPP (Betaine aldehyde dehydrogenase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=betB PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 3.294e-21
Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = 3
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLILSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMA-AAAPMVKPVSL 626
            K  PALAAG A I KPSE+  ++ L+LAE   E G     F ++  D     GA L +HP ++KI+FTG   TG ++M+ A A  +K V++
Sbjct:  162 KSAPALAAGNAMIFKPSEITPLSALKLAEIFTEAGVPAGVFNVVQGD--GRVGAMLAAHPDIEKISFTGGVETGKKVMSMAGASSLKEVTM 250          

HSP 2 Score: 56.9954 bits (136), Expect = 3.294e-21
Identity = 38/103 (36.89%), Postives = 56/103 (54.37%), Query Frame = 1
Query:   31 KDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            ++W++ +   R++ LR     + ER  ELA LET D GKP+ E +  DI   A   EYYA LA  ++ +Q   + L   +F  Y  +EP+ G+   I  WNYP
Sbjct:   58 REWAALTAMQRSRILRRAVDLLRERNDELAALETRDTGKPIAETLAVDIVTGADVIEYYAGLATAIEGQQ---IPLRPTSF-VYTRREPL-GVCAGIGAWNYP 155          
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: BETB_BURVG (Betaine aldehyde dehydrogenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=betB PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 3.294e-21
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 3
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLILSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMA-AAAPMVKPVSL 626
            K  PALAAG A + KPSE+  +T L+LAE   E G     F ++  D     GA L  HP + K++FTG   TG ++M+ A A  +K V++
Sbjct:  162 KTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGD--GSVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTM 250          

HSP 2 Score: 58.5362 bits (140), Expect = 3.294e-21
Identity = 42/113 (37.17%), Postives = 60/113 (53.10%), Query Frame = 1
Query:    4 RQALSRNKG-KDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            R   S  +G ++W++ +   R++ LR     + ER  ELA +ET D GKP+ E +  DI   A   EYYA LA  ++  Q   V L  E+F  Y  +EP+ G+   I  WNYP
Sbjct:   48 RAVASAQQGQREWAALTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQ---VPLRAESF-VYTRREPL-GVCAGIGAWNYP 155          
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: BETB_BURCJ (Betaine aldehyde dehydrogenase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=betB PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 3.294e-21
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 3
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLILSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMA-AAAPMVKPVSL 626
            K  PALAAG A + KPSE+  +T L+LAE   E G     F ++  D     GA L  HP + K++FTG   TG ++M+ A A  +K V++
Sbjct:  162 KTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGD--GSVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTM 250          

HSP 2 Score: 58.5362 bits (140), Expect = 3.294e-21
Identity = 42/113 (37.17%), Postives = 60/113 (53.10%), Query Frame = 1
Query:    4 RQALSRNKG-KDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            R   S  +G ++W++ +   R++ LR     + ER  ELA +ET D GKP+ E +  DI   A   EYYA LA  ++  Q   V L  E+F  Y  +EP+ G+   I  WNYP
Sbjct:   48 RAVASAQEGQREWAAMTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQ---VPLRAESF-VYTRREPL-GVCAGIGAWNYP 155          
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: BETB_BURCC (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3) GN=betB PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 3.294e-21
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 3
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLILSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMA-AAAPMVKPVSL 626
            K  PALAAG A + KPSE+  +T L+LAE   E G     F ++  D     GA L  HP + K++FTG   TG ++M+ A A  +K V++
Sbjct:  162 KTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGD--GSVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTM 250          

HSP 2 Score: 58.5362 bits (140), Expect = 3.294e-21
Identity = 42/113 (37.17%), Postives = 60/113 (53.10%), Query Frame = 1
Query:    4 RQALSRNKG-KDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            R   S  +G ++W++ +   R++ LR     + ER  ELA +ET D GKP+ E +  DI   A   EYYA LA  ++  Q   V L  E+F  Y  +EP+ G+   I  WNYP
Sbjct:   48 RAVASAQEGQREWATMTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQ---VPLRAESF-VYTRREPL-GVCAGIGAWNYP 155          
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: ALDH2_PIG (Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 7.241e-21
Identity = 38/96 (39.58%), Postives = 51/96 (53.12%), Query Frame = 3
Query:  312 IDYSMELSLY*WPHGKWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLILSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMAAA 599
            I ++  L +  W  G   PALA G   ++K SE   +T L +A  +KE G   P  + + P + P AGA + SH  VDK+AFTGS   G  I  AA
Sbjct:  187 IPWNFPLLMQAWKLG---PALATGNVVVMKVSEQTPLTALYVANLIKEAGFP-PGVVNIVPGYGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAA 278          

HSP 2 Score: 57.7658 bits (138), Expect = 7.241e-21
Identity = 37/105 (35.24%), Postives = 55/105 (52.38%), Query Frame = 1
Query:   28 GKDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKP-LEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPLE-NFKSYVLKEPIWGLFGLITPWNYP 336
            G  W     + R + L  +A  I   ++ LA LET+D GKP +   + D+D V  C  YYA  A+    K     +LP++ ++ SY   EP+ G+ G I PWN+P
Sbjct:   94 GSPWRRLDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK-----TLPIDGDYFSYTRHEPV-GVCGQIIPWNFP 192          
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: AL9A1_HUMAN (4-trimethylaminobutyraldehyde dehydrogenase OS=Homo sapiens GN=ALDH9A1 PE=1 SV=3)

HSP 1 Score: 61.6178 bits (148), Expect = 7.248e-21
Identity = 41/102 (40.20%), Postives = 53/102 (51.96%), Query Frame = 1
Query:   31 KDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAVWDIDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            K WS  SG  R + L   A  I ER+ E+A +E I+ GK + EA  DID    C EYYA LA  +  +    + LP  +F  Y  +EP+    G I  WNYP
Sbjct:   63 KIWSQKSGMERCRILLEAARIIREREDEIATMECINNGKSIFEARLDIDISWQCLEYYAGLAASMAGEH---IQLPGGSF-GYTRREPLGVCVG-IGAWNYP 159          

HSP 2 Score: 59.3066 bits (142), Expect = 7.248e-21
Identity = 38/90 (42.22%), Postives = 47/90 (52.22%), Query Frame = 3
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLILSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMAAAAPMVKPVSL 626
            K  PALA G A + KPS    V+ L LAE   E G  +P  L          G  L  HP V K++FTGS  TG +IM  +A  +KPV+L
Sbjct:  166 KSAPALACGNAMVFKPSPFTPVSALLLAEIYSEAG--VPPGLFNVVQGGAATGQFLCQHPDVAKVSFTGSVPTGMKIMEMSAKGIKPVTL 253          
BLAST of CF417141 vs. ExPASy Swiss-Prot
Match: BETB_BURM1 (Betaine aldehyde dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=betB PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 9.430e-21
Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 3
Query:  357 KWPPALAAGCAAILKPSELASVTCLELAECVKEGGSSLPAFLILSPDWVPEAGAPLVSHPHVDKIAFTGSNATGSRIMA-AAAPMVKPVSL 626
            K  PALAAG A + KPSE+  ++ L+LAE   E G     F ++  D     GA L  HP + K++FTG   TG ++M+ A A  +K V++
Sbjct:  162 KTAPALAAGNAMVFKPSEVTPLSALKLAEIYTEAGVPAGVFNVVQGD--GSVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTM 250          

HSP 2 Score: 58.5362 bits (140), Expect = 9.430e-21
Identity = 39/103 (37.86%), Postives = 56/103 (54.37%), Query Frame = 1
Query:   31 KDWSSASGAFRAKYLRAIAAKITERKSELANLETIDCGKPLEEAV-WDIDDVAGCFEYYADLAEGLDAKQKAPVSLPLENFKSYVLKEPIWGLFGLITPWNYP 336
            ++W++ +   R++ LR     + ER  ELA LET D GKP+ E +  DI   A   EYYA LA  ++  Q   V L  ++F  Y  +EP+ G+   I  WNYP
Sbjct:   58 REWAAMTAMQRSRILRRAVELLRERNDELAALETRDTGKPIAETLAVDIVTGADVIEYYAGLATAIEGLQ---VPLRADSF-VYTRREPL-GVCAGIGAWNYP 155          
The following BLAST results are available for this feature:
BLAST of CF417141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
AL2C4_ARATH2.531e-2143.96Aldehyde dehydrogenase family 2 member C4 OS=Arabi... [more]
BETB_BURCH2.532e-2140.66Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
BETB_BURCA2.532e-2140.66Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
BETB_BURPP3.294e-2141.76Betaine aldehyde dehydrogenase OS=Burkholderia phy... [more]
BETB_BURVG3.294e-2140.66Betaine aldehyde dehydrogenase OS=Burkholderia vie... [more]
BETB_BURCJ3.294e-2140.66Betaine aldehyde dehydrogenase OS=Burkholderia cep... [more]
BETB_BURCC3.294e-2140.66Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
ALDH2_PIG7.241e-2139.58Aldehyde dehydrogenase, mitochondrial OS=Sus scrof... [more]
AL9A1_HUMAN7.248e-2140.204-trimethylaminobutyraldehyde dehydrogenase OS=Hom... [more]
BETB_BURM19.430e-2139.56Betaine aldehyde dehydrogenase OS=Burkholderia mul... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-071 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-001_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417141 ID=CF417141; Name=CF417141; organism=Citrus sinensis; type=EST; length=634bp
GCCCGTCAAGCACTTTCTAGAAACAAAGGGAAGGATTGGTCCTCTGCATC
CGGGGCATTTCGTGCTAAGTATTTGCGTGCTATTGCTGCTAAGATAACAG
AGAGGAAGTCTGAACTGGCAAACCTTGAAACGATTGATTGTGGGAAGCCA
CTGGAAGAAGCTGTTTGGGACATCGATGATGTTGCTGGGTGTTTTGAGTA
CTATGCAGACCTTGCTGAAGGCTTAGATGCCAAACAAAAGGCTCCTGTTT
CTCTTCCTCTGGAGAATTTCAAGAGTTATGTACTTAAGGAACCCATTTGG
GGGTTGTTTGGATTGATTACTCCATGGAATTATCCCTCTATTGATGGCCA
CATGGAAAGTGGCCTCCTGCGTTGGCAGCAGGATGCGCTGCAATATTAAA
GCCATCTGAATTGGCGTCTGTGACCTGTTTGGAGCTTGCTGAATGTGTNA
AAGAAGGTGGGTCTTCCCTCCCGGCGTTCTTAATATTGTCACCGGATTGG
GTCCCTGAAGCTGGGGCTCCTTTGGTATCCCATCCCCACGTTGACAAGAT
TGCATTTACTGGAAGCAATGCAACAGGGAGCAGGATAATGGCAGCTGCAG
CTCCGATGGTCAAGCCTGTTTCTTTGGGAGCTGG
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