CF417153
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLN13_ARATH (Glutamine synthetase cytosolic isozyme 1-3 OS=Arabidopsis thaliana GN=GLN1-3 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.458e-28 Identity = 66/116 (56.90%), Postives = 76/116 (65.52%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGI---HLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFR+GNNILVMCDAYTPAG+PIPTNKRH AAKIFSH DV EEPW GI + ++ +N P+GW + K GRDIVD+HYKACLYAGI ISG Sbjct: 79 KDPFRKGNNILVMCDAYTPAGDPIPTNKRHNAAKIFSHPDVAKEEPWY----GIEQEYTLMQKDVNWPIGWPVG--GYPGPQGPYYCGVGADKAIGRDIVDAHYKACLYAGIGISG 188 HSP 2 Score: 108.227 bits (269), Expect = 4.318e-23 Identity = 62/121 (51.24%), Postives = 74/121 (61.16%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLTLLRENQFQQTKDMQLPRFSAILMLWLKNHGYGIEQEYTLL 534 T KIIAEYIWIGGSGMD+RSKARTLPGPV+DPSKLPKWNYDGSSTGQA GED + F+ I ++C T + K + + + + YGIEQEYTL+ Sbjct: 16 TGKIIAEYIWIGGSGMDIRSKARTLPGPVTDPSKLPKWNYDGSSTGQAAGEDSEVILYPQAIFKDPFRKGNNILVMCDAYTPAGD-PIPTNKRHNAAKIFSHPDVAKEEPWYGIEQEYTLM 135
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLN12_ARATH (Glutamine synthetase cytosolic isozyme 1-2 OS=Arabidopsis thaliana GN=GLN1-2 PE=1 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 4.458e-28 Identity = 66/113 (58.41%), Postives = 77/113 (68.14%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFRRGNNILVMCDAYTPAGEPIPTNKRHAAA+IF++ DV+AE PW L ++ +N PLGW + K +GRDIVD+HYKA LYAGINISG Sbjct: 79 KDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAEIFANPDVIAEVPWYGIEQEYTLL-QKDVNWPLGWPIG--GFPGPQGPYYCSIGADKSFGRDIVDAHYKASLYAGINISG 188 HSP 2 Score: 112.079 bits (279), Expect = 2.990e-24 Identity = 64/121 (52.89%), Postives = 75/121 (61.98%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLTLLRENQFQQTKDMQLPRFSAILMLWLKNHGYGIEQEYTLL 534 ++KIIAEYIW+GGSGMDMRSKARTLPGPV+DPSKLPKWNYDGSSTGQAPG+D + F+ I ++C T E K A + + YGIEQEYTLL Sbjct: 16 SEKIIAEYIWVGGSGMDMRSKARTLPGPVTDPSKLPKWNYDGSSTGQAPGQDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGE-PIPTNKRHAAAEIFANPDVIAEVPWYGIEQEYTLL 135
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLN14_ARATH (Glutamine synthetase cytosolic isozyme 1-4 OS=Arabidopsis thaliana GN=GLN1-4 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.822e-28 Identity = 66/113 (58.41%), Postives = 74/113 (65.49%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF VVAEE W L ++ + P+GW + K +GRDIVDSHYKACLYAGIN+SG Sbjct: 79 KDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFEDPSVVAEETWYGIEQEYTLL-QKDIKWPVGWPVG--GFPGPQGPYYCGVGADKAFGRDIVDSHYKACLYAGINVSG 188 HSP 2 Score: 112.079 bits (279), Expect = 2.990e-24 Identity = 63/121 (52.07%), Postives = 75/121 (61.98%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLTLLRENQFQQTKDMQLPRFSAILMLWLKNHGYGIEQEYTLL 534 TD+IIAEYIWIGGSG+DMRSKARTLPGPV+DPS+LPKWNYDGSSTGQAPG+D + F+ I ++C T E K + + + YGIEQEYTLL Sbjct: 16 TDQIIAEYIWIGGSGLDMRSKARTLPGPVTDPSQLPKWNYDGSSTGQAPGDDSEVIIYPQAIFKDPFRRGNNILVMCDAYTPAGE-PIPTNKRHAAAKIFEDPSVVAEETWYGIEQEYTLL 135
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA4_PEA (Glutamine synthetase root isozyme B OS=Pisum sativum GN=GS3B PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.604e-28 Identity = 64/113 (56.64%), Postives = 75/113 (66.37%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFRRGNNILV+CD YTPAGEP+PTNKR+ AAKIFSH DV AE PW L ++ +N PLGW + K +GRDIVD+HYKACL+AGINISG Sbjct: 79 KDPFRRGNNILVICDVYTPAGEPLPTNKRYNAAKIFSHPDVAAEVPWYGIEQEYTLL-QKDINWPLGWPIG--GYPGKQGPYYCGIGADKAYGRDIVDAHYKACLFAGINISG 188 HSP 2 Score: 111.309 bits (277), Expect = 5.101e-24 Identity = 64/126 (50.79%), Postives = 79/126 (62.70%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLT-----LLRENQFQQTKDMQLPRFSAILMLWLKNHGYGIEQEYTLL 534 T+KIIAEYIW+GGSG+D+RSKARTLPGPVSDP+KLPKWNYDGSST QAPG+D + F+ I ++C + T L ++ K P +A + W YGIEQEYTLL Sbjct: 16 TEKIIAEYIWVGGSGIDIRSKARTLPGPVSDPAKLPKWNYDGSSTDQAPGKDSEVILYPQAIFKDPFRRGNNILVICDVYTPAGEPLPTNKRYNAAKIFSHPDVAAEVP-W-----YGIEQEYTLL 135
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA3_PEA (Glutamine synthetase root isozyme A OS=Pisum sativum GN=GS3A PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.604e-28 Identity = 64/113 (56.64%), Postives = 75/113 (66.37%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFRRGNNILV+CD YTPAGEP+PTNKR+ AAKIFSH DV AE PW L ++ +N PLGW + K +GRDIVD+HYKACL+AGINISG Sbjct: 79 KDPFRRGNNILVICDVYTPAGEPLPTNKRYNAAKIFSHPDVAAEVPWYGIEQEYTLL-QKDINWPLGWPIG--GYPGKQGPYYCGIGADKAYGRDIVDAHYKACLFAGINISG 188 HSP 2 Score: 111.694 bits (278), Expect = 3.905e-24 Identity = 64/126 (50.79%), Postives = 79/126 (62.70%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLT-----LLRENQFQQTKDMQLPRFSAILMLWLKNHGYGIEQEYTLL 534 T+KIIAEYIW+GGSG+D+RSKARTLPGPVSDP+KLPKWNYDGSST QAPG+D + F+ I ++C + T L ++ K P +A + W YGIEQEYTLL Sbjct: 16 TEKIIAEYIWVGGSGIDIRSKARTLPGPVSDPAKLPKWNYDGSSTNQAPGKDSEVILYPQAIFKDPFRRGNNILVICDVYTPAGEPLPTNKRYNAAKIFSHPDVAAEVP-W-----YGIEQEYTLL 135
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA3_MAIZE (Glutamine synthetase root isozyme 3 OS=Zea mays GN=GLN4 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.931e-28 Identity = 66/113 (58.41%), Postives = 74/113 (65.49%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFRRGNNILVMCD YTPAGEPIPTNKR+ AAKIFS +V AEEPW L ++ N PLGW + K +GRDIVD+HYKACLYAGINISG Sbjct: 79 KDPFRRGNNILVMCDCYTPAGEPIPTNKRYNAAKIFSSPEVAAEEPWYGIEQEYTLL-QKDTNWPLGWPIG--GFPGPQGPYYCGIGAEKSFGRDIVDAHYKACLYAGINISG 188 HSP 2 Score: 115.161 bits (287), Expect = 3.532e-25 Identity = 66/126 (52.38%), Postives = 77/126 (61.11%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLTLLRE-----NQFQQTKDMQLPRFSAILMLWLKNHGYGIEQEYTLL 534 T+KIIAEYIWIGGSGMD+RSKARTL GPV+DPSKLPKWNYDGSSTGQAPGED + F+ I ++C T E ++ K P +A + YGIEQEYTLL Sbjct: 16 TEKIIAEYIWIGGSGMDLRSKARTLSGPVTDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDCYTPAGEPIPTNKRYNAAKIFSSPEVAA------EEPWYGIEQEYTLL 135
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA1_MAIZE (Glutamine synthetase root isozyme 1 OS=Zea mays GN=GLN6 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.407e-27 Identity = 61/113 (53.98%), Postives = 75/113 (66.37%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFR+GN+ILVMCD YTP GEPIPTNKR++AAK+FSH DV AE PW L ++ ++ PLGW + K +GRD+VD+HYKACLYAGINISG Sbjct: 79 KDPFRKGNHILVMCDCYTPQGEPIPTNKRYSAAKVFSHPDVAAEVPWYGIEQEYTLL-QKDVSWPLGWPVG--GYPGPQGPYYCAAGADKAFGRDVVDAHYKACLYAGINISG 188 HSP 2 Score: 104.76 bits (260), Expect = 4.774e-22 Identity = 60/126 (47.62%), Postives = 77/126 (61.11%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLT-----LLRENQFQQTKDMQLPRFSAILMLWLKNHGYGIEQEYTLL 534 TD+IIAEYIWIGG+G+D+RSKART+ GP++DP +LPKWNYDGSSTGQAPGED + F+ I ++C T + ++ K P +A + W YGIEQEYTLL Sbjct: 16 TDRIIAEYIWIGGTGIDLRSKARTVKGPITDPIQLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRKGNHILVMCDCYTPQGEPIPTNKRYSAAKVFSHPDVAAEVP-W-----YGIEQEYTLL 135
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA5_MAIZE (Glutamine synthetase root isozyme 5 OS=Zea mays GN=GS1-5 PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 2.446e-26 Identity = 61/113 (53.98%), Postives = 73/113 (64.60%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFR+GNNILVMCD YTP GEPIP+NKR+ AA +FSH DV AE PW L ++ L+ PLGW + K +GRD+VD+HYKACLYAGINISG Sbjct: 79 KDPFRKGNNILVMCDCYTPQGEPIPSNKRYKAATVFSHPDVAAEVPWYGIEQEYTLL-QKDLSWPLGWPVG--GYPGPQGPYYCAAGADKAFGRDVVDAHYKACLYAGINISG 188 HSP 2 Score: 108.227 bits (269), Expect = 4.318e-23 Identity = 63/125 (50.40%), Postives = 76/125 (60.80%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLTLLRENQFQQTKDMQLPRFS----AILMLWLKNHGYGIEQEYTLL 534 TDKIIAEYIW+GGSG+D+RSKART+ GP++DPS+LPKWNYDGSSTGQAPGED + F+ I ++C T E + FS A + W YGIEQEYTLL Sbjct: 16 TDKIIAEYIWVGGSGIDLRSKARTVKGPITDPSQLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRKGNNILVMCDCYTPQGEPIPSNKRYKAATVFSHPDVAAEVPW-----YGIEQEYTLL 135
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLN13_ORYSJ (Glutamine synthetase cytosolic isozyme 1-3 OS=Oryza sativa subsp. japonica GN=GLN1-3 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.446e-26 Identity = 62/113 (54.87%), Postives = 72/113 (63.72%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 RDPFR+G NILVMCD Y P GEPIPTN R+ AA+IFSH DV AEEPW L ++ +N PLGW + K +GRDIVD+HYKACL+AGINISG Sbjct: 81 RDPFRKGKNILVMCDCYAPNGEPIPTNNRYNAARIFSHPDVKAEEPWYGIEQEYTLL-QKHINWPLGWPLG--GYPGPQGPYYCAAGADKSYGRDIVDAHYKACLFAGINISG 190 HSP 2 Score: 105.145 bits (261), Expect = 3.655e-22 Identity = 59/126 (46.83%), Postives = 74/126 (58.73%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLT-----LLRENQFQQTKDMQLPRFSAILMLWLKNHGYGIEQEYTLL 534 TDK+IAEYIW+GG+GMD+RSKARTL GPV DPSKLPKWN+DGSSTGQA G+D + F+ I ++C + N++ + P A + YGIEQEYTLL Sbjct: 18 TDKVIAEYIWVGGTGMDVRSKARTLSGPVDDPSKLPKWNFDGSSTGQATGDDSEVILHPQAIFRDPFRKGKNILVMCDCYAPNGEPIPTNNRYNAARIFSHPDVKA------EEPWYGIEQEYTLL 137
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA1_DAUCA (Glutamine synthetase cytosolic isozyme OS=Daucus carota GN=GLN1 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.173e-26 Identity = 64/113 (56.64%), Postives = 73/113 (64.60%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFRRGN+ILVMCD YTPAGEPIPTNKR AAKIFSH DV AE PW L ++ +N P+G + K +GRDIVD+HYKACLYAGINISG Sbjct: 78 KDPFRRGNHILVMCDTYTPAGEPIPTNKRCNAAKIFSHPDVAAEVPWFGIEQEYTLL-KKEVNCPIGCPTG--GYPGPQGPYYCGIGADKAFGRDIVDAHYKACLYAGINISG 187 HSP 2 Score: 87.0409 bits (214), Expect = 1.030e-16 Identity = 57/126 (45.24%), Postives = 69/126 (54.76%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLTLLRE-----NQFQQTKDMQLPRFSAILMLWLKNHGYGIEQEYTLL 534 TDK IAEYIWI G +RSKARTL GPV DP+KLPKWN+DGSSTGQ PG+D + F+ I ++C T E + K P +A + W +GIEQEYTLL Sbjct: 16 TDKFIAEYIWIDAVG-GLRSKARTLSGPVDDPTKLPKWNFDGSSTGQGPGDDSEVIIYPQAIFKDPFRRGNHILVMCDTYTPAGEPIPTNKRCNAAKIFSHPDVAAEVP-W-----FGIEQEYTLL 134 The following BLAST results are available for this feature:
BLAST of CF417153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417153 ID=CF417153; Name=CF417153; organism=Citrus sinensis; type=EST; length=701bpback to top |