CF417153
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA_HEBCY (Glutamine synthetase OS=Hebeloma cylindrosporum GN=GLN1 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.991e-23 Identity = 41/113 (36.28%), Postives = 56/113 (49.56%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFR G+NILV+ + Y G P TN RH AAK+ A+E W+ T P GW + K + RD++++HY+ACLY+GINISG Sbjct: 81 KDPFRGGDNILVLAETYNSDGTPNRTNFRHHAAKVMEQ----AKEDVPWFGLEQEYTLFDADGSPYGWPKG--GFPGPQGPYYCGAGTGKVFARDLIEAHYRACLYSGINISG 187 HSP 2 Score: 56.6102 bits (135), Expect = 9.991e-23 Identity = 27/51 (52.94%), Postives = 34/51 (66.67%), Query Frame = 1 Query: 175 DKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED 327 DKI AEY+W+ G G +RSK T+ V+D L W++DGSST QAPG D Sbjct: 20 DKIQAEYVWVDGDG-GLRSKTTTVSKKVTDIGSLRIWDFDGSSTNQAPGHD 69
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA_PINSY (Glutamine synthetase cytosolic isozyme OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.143e-22 Identity = 57/113 (50.44%), Postives = 68/113 (60.18%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 RDPFRRG +ILV+CDAY+P G IP+NKR AAAKIF+ V EE W L ++ + PLGW + K WGRDIVD+HYKACLY+GINISG Sbjct: 80 RDPFRRGKHILVICDAYSPNGTAIPSNKRAAAAKIFNEKAVSDEETWYGLEQEYTLL-QKDVKWPLGWPIG--GYPGPQGPYYCGVGADKAWGRDIVDAHYKACLYSGINISG 189 HSP 2 Score: 95.1301 bits (235), Expect = 3.783e-19 Identity = 57/125 (45.60%), Postives = 71/125 (56.80%), Query Frame = 1 Query: 172 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVML----TLLRENQFQQTKDMQLPRFSAILMLWLKNHGYGIEQEYTLL 534 T+K+IAEYIWIGGSGMDMRSKAR+L GPVS +LPKWNYDGSSTGQA G D + F+ I ++C T + N+ + + + W YG+EQEYTLL Sbjct: 17 TEKVIAEYIWIGGSGMDMRSKARSLSGPVSSVKELPKWNYDGSSTGQAQGHDSEVILYPQAIFRDPFRRGKHILVICDAYSPNGTAIPSNKRAAAAKIFNEKAVSDEETW-----YGLEQEYTLL 136
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA_FUSSH (Glutamine synthetase OS=Fusarium solani subsp. phaseoli GN=GLN1 PE=2 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 1.926e-20 Identity = 43/113 (38.05%), Postives = 52/113 (46.02%), Query Frame = 3 Query: 366 DPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAE-EPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 DPFR NI+V+ + + G P N RH K+ D AE EPW L G N P GW + + K RDIV++HYKACLYAGI ISG Sbjct: 86 DPFRGSPNIIVLAECWNAGGTPNKFNFRHDCVKVM---DTYAEDEPWFGLEQEYTLLGPD--NRPYGWPTG--GFPAPQGEYYCGVGTGKVVQRDIVEAHYKACLYAGIQISG 191 HSP 2 Score: 57.7658 bits (138), Expect = 1.926e-20 Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 1 Query: 178 KIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED 327 +I+AEY+W+ +G + RSK+RTLP LP WN+DGSST QAPG++ Sbjct: 25 QIMAEYVWVDAAG-ETRSKSRTLPEKDYKAEDLPVWNFDGSSTNQAPGDN 73
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA_CAEEL (Probable glutamine synthetase OS=Caenorhabditis elegans GN=gln-2 PE=3 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 3.467e-19 Identity = 36/112 (32.14%), Postives = 52/112 (46.43%), Query Frame = 3 Query: 366 DPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 DPF G N LVMCD +P T+ R A A+I ++ PW + R PLGW + + +GR++V++HY+ACL+AG+NI G Sbjct: 91 DPFLGGGNKLVMCDTLDHQMQPTATSHRQACAEIMH--EIRDTRPWFGMEQEYLIVDRD--EHPLGWPKH--GFPDPQGKYYCSVGADRAFGREVVETHYRACLHAGLNIFG 196 HSP 2 Score: 57.3806 bits (137), Expect = 3.467e-19 Identity = 30/53 (56.60%), Postives = 35/53 (66.04%), Query Frame = 1 Query: 178 KIIAEYIWIGGSGMDMRSKART---LPGPVSDPSKLPKWNYDGSSTGQAPGED 327 KI A Y+WI G+G ++RSK RT LP + D P WNYDGSSTGQA G D Sbjct: 29 KIQATYVWIDGTGENLRSKTRTFDKLPKRIED---YPIWNYDGSSTGQAKGRD 78
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA_MIMIV (Putative glutamine synthetase OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R565 PE=3 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 3.470e-19 Identity = 43/114 (37.72%), Postives = 55/114 (48.25%), Query Frame = 3 Query: 363 RDPFRRG-NNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 R PFRR N ++V+CD Y G P+ TN RH A IF E+PW + R+ N P+G + +AS +GR I D H +ACLYAGI ISG Sbjct: 81 RCPFRRNVNGVIVICDTYDVNGVPLETNHRHNANIIFEKYQ--NEKPWYGL-EQEYFIFRKDTNQPIG-----MEYASKQGQYYCSVGSQNAYGRRISDEHMEACLYAGIKISG 186 HSP 2 Score: 51.6026 bits (122), Expect = 3.470e-19 Identity = 27/49 (55.10%), Postives = 32/49 (65.31%), Query Frame = 1 Query: 184 IAEYIWIGGSGMDMRSKARTLPGPVSDPSKL---PKWNYDGSSTGQAPG 321 I EY+WIGG+G ++RSK R L + KL P WNYDGSST QA G Sbjct: 20 IIEYVWIGGNG-ELRSKTRVLYSSIMTGYKLSDIPVWNYDGSSTNQANG 67
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA_GIBFU (Glutamine synthetase OS=Gibberella fujikuroi GN=GLN1 PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 4.513e-19 Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 1 Query: 181 IIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED 327 I+AEY+W+ G RSK+RTLP P LP WN+DGSST QAPG++ Sbjct: 24 IMAEYVWVDADG-GTRSKSRTLPEKEYKPEDLPVWNFDGSSTNQAPGDN 71 HSP 2 Score: 55.8398 bits (133), Expect = 4.513e-19 Identity = 40/113 (35.40%), Postives = 53/113 (46.90%), Query Frame = 3 Query: 366 DPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIF-SHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 DPFR NI+V+ + + G P N RH K+ +++D +EP L G N P GW + + K RDIV++HYKACLYAGI ISG Sbjct: 84 DPFRGSPNIIVLAECWNADGTPNKYNFRHDCVKVMDTYAD---DEPLFGLEQEYTLLGSD--NRPYGWPAG--GFPAPQGEYYCGVGTGKVVQRDIVEAHYKACLYAGIQISG 189
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA1_CHLRE (Glutamine synthetase cytosolic isozyme OS=Chlamydomonas reinhardtii GN=GLN1 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.785e-14 Identity = 56/127 (44.09%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 178 KIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGED**SDPLSSSYFQGIHSGEATIFLLCVMLTLLRENQFQQTKDMQLP-----RFS-AILMLWLKNH--GYGIEQEYTLL 534 KI AEY+WIGGS D+RSK+RTL + P LP WNYDGSSTGQAPG D + S F+ G I ++C + N T P RF+ A +M K +GIEQEYTLL Sbjct: 37 KICAEYVWIGGSMHDVRSKSRTLSTIPTKPEDLPHWNYDGSSTGQAPGHDSEVYLIPRSIFKDPFRGGDNILVMCDCYEPPKVNP-DGTLAAPKPIPTNTRFACAEVMEKAKKEEPWFGIEQEYTLL 162 HSP 2 Score: 70.0922 bits (170), Expect = 1.303e-11 Identity = 45/123 (36.59%), Postives = 58/123 (47.15%), Query Frame = 3 Query: 363 RDPFRRGNNILVMCDAYTP----------AGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 +DPFR G+NILVMCD Y P A +PIPTN R A A++ + EEPW L + PLGW + + GRD+ + HY+ CL AG+NISG Sbjct: 98 KDPFRGGDNILVMCDCYEPPKVNPDGTLAAPKPIPTNTRFACAEVMEKAK--KEEPWFGIEQEYTLL-NAITKWPLGWPKG--GYPAPQGPYYCSAGAGVAIGRDVAEVHYRLCLAAGVNISG 215
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA_EMENI (Glutamine synthetase OS=Emericella nidulans GN=glnA PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-12 Identity = 43/114 (37.72%), Postives = 56/114 (49.12%), Query Frame = 3 Query: 366 DPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLS--WASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 DPFRRG+NILV+C+ + G P N RH A++ EE W L L GP GW + W + K + RDIV++HY+ACLYAG+ ISG Sbjct: 72 DPFRRGDNILVLCETWDSDGSPNKFNYRHDCARLMETH--AKEEFW------FGLEQEYTLLGPDGWPYGWPKGGFPGAQGPYYCGVGTGKVYCRDIVEAHYRACLYAGVKISG 177
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA_YARLI (Glutamine synthetase OS=Yarrowia lipolytica GN=GLN1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.639e-12 Identity = 39/112 (34.82%), Postives = 58/112 (51.79%), Query Frame = 3 Query: 366 DPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 DPFRRG+NI+V+ + + G P N RH AK+ S E+ +W+ T + P+GW + + K + RD+V++HY+ACLY+GINISG Sbjct: 75 DPFRRGDNIIVLAECWNNDGTPNKFNHRHECAKLMS----AHEKEVIWFGIEQEYTMFDESDNPVGWPKG--GFPAPQGPYYCGVGTGKVFARDVVEAHYRACLYSGINISG 180
BLAST of CF417153 vs. ExPASy Swiss-Prot
Match: GLNA_SCHPO (Glutamine synthetase OS=Schizosaccharomyces pombe GN=gln1 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12 Identity = 44/113 (38.94%), Postives = 55/113 (48.67%), Query Frame = 3 Query: 366 DPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFS-HSDVVAEEPWVWY*AGIHLTGRRMLNGPLGWAHRWLSWASXXXXXXXXXXXXKXWGRDIVDSHYKACLYAGINISG 701 DPFRRG+NILV+ YT G P N R A AK+ H+D W+ T + P GW + + + RDIV++HYKACLYAGINISG Sbjct: 88 DPFRRGDNILVLAACYTADGSPNGFNHRDACAKLLEKHADKET-----WFGIEQEYTMLDYYDRPFGWPKG--GFPGPQGPFYCGVGTGRVFARDIVEAHYKACLYAGINISG 193 The following BLAST results are available for this feature:
BLAST of CF417153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417153 ID=CF417153; Name=CF417153; organism=Citrus sinensis; type=EST; length=701bpback to top |