CF417199

Overview
NameCF417199
Unique NameCF417199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: SSN3_SCHPO (Serine/threonine-protein kinase prk1 OS=Schizosaccharomyces pombe GN=prk1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.742e-21
Identity = 61/207 (29.47%), Postives = 97/207 (46.86%), Query Frame = 3
Query:   15 YEKLEKVGEGTYGKVYKAKDKATG--QLVALKKTRLEM-------DEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAF---TVPLKSYTHEIVTLWYR 599
            Y+ +  +  GTYGKVYKA    +   +L A+KK + E         + G+  +A+RE+ L + + Q   +V L+ V   D ++                        +VFEY + DL + I  H +    R +PP++++S L+Q+  GVA+ H + ++HRDLKP N               GLGR      +P  S    +VT+WYR
Sbjct:    5 YKIIGFISSGTYGKVYKAVSSNSNDKRLFAIKKFKAESKQVSSNAQQTGVSQSAIREMMLCREI-QHENIVSLVQVLLKDGTIS-----------------------MVFEYAEHDLLQIIHFHSRS-RTRQIPPSILKSILWQIINGVAYLHENWIMHRDLKPAN-IMITATGKVKIGDLGLGRLIRDPILPFYSSDRVVVTIWYR 185          

HSP 2 Score: 42.3578 bits (98), Expect = 1.742e-21
Identity = 15/28 (53.57%), Postives = 24/28 (85.71%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMV 684
            APE+LLG+  Y+ A+D+W++GCI+ EM+
Sbjct:  186 APELLLGAHDYTPAIDVWAIGCIYGEML 213          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: SSN3_DEBHA (Serine/threonine-protein kinase SSN3 OS=Debaryomyces hansenii GN=SSN3 PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 2.931e-21
Identity = 64/229 (27.95%), Postives = 97/229 (42.36%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQL--------------------VALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGK--------SNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKS-YTHE--IVTLWYR 599
            + KY+ +  +  GTYGKVYKAK K  G                        L+KT  E  E+     A+++       +++ + +    V H     +S           +  N  K         ++Y+VFEY + DL + I  H   P+ +P+P   I+S  +Q+  GV   H + + HRDLKP N               GL R F  PL+S YT +  +VT+WYR
Sbjct:   56 LTKYQIIGYIAAGTYGKVYKAKSKTNGNSNSNSALMNDNVISIGNGQKEAGLQKTNNESMEDKNQLFAIKKFKSDNHSNKNNHDINGNEVIHYTGISQSAIREMSLCRELSNKNITKVVDILLENKSIYMVFEYCEHDLLQIIQYHSH-PDVKPIPDFTIKSITWQILNGVTFLHKNWIFHRDLKPAN-IMVSSSGVVKIGDLGLARKFNNPLQSLYTGDKVVVTIWYR 282          

HSP 2 Score: 45.0542 bits (105), Expect = 2.931e-21
Identity = 16/28 (57.14%), Postives = 25/28 (89.29%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMV 684
            APE+LLG+ HY+ ++D+W+VGCI AE++
Sbjct:  283 APELLLGARHYTPSIDLWAVGCILAELL 310          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: MPK1_ORYSJ (Mitogen-activated protein kinase 1 OS=Oryza sativa subsp. japonica GN=MPK1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.940e-21
Identity = 58/189 (30.69%), Postives = 84/189 (44.44%), Query Frame = 3
Query:   33 VGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            +G+G YG V  A +  TG+ VA+KK     D +      LRE+ LL+ +     V           +++   P P          N  +++Y+ +E +DTDL + I S++       L     Q FLYQ+ +G+ + HS  VLHRDLKP N               GL R  T      T  +VT WYR
Sbjct:   73 IGKGAYGIVCSALNSETGEQVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIV-----------AIRDIIPPPQ--------RNSFNDVYIAYELMDTDLHQIIRSNQA------LSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSN-LLLNANCDLKICDFGLART-TSETDFMTEYVVTRWYR 234          

HSP 2 Score: 46.2098 bits (108), Expect = 2.940e-21
Identity = 18/31 (58.06%), Postives = 26/31 (83.87%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            APE+LL S+ Y+ A+D+WSVGCIF E++ R+
Sbjct:  235 APELLLNSSEYTAAIDVWSVGCIFMELMDRK 265          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDKL1_HUMAN (Cyclin-dependent kinase-like 1 OS=Homo sapiens GN=CDKL1 PE=2 SV=5)

HSP 1 Score: 102.064 bits (253), Expect = 3.043e-21
Identity = 66/198 (33.33%), Postives = 95/198 (47.98%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            MEKYEK+ K+GEG+YG V+K +++ TGQ+VA+KK     D+  I   ALRE+ +L+ L     +V LL V                          K  L+LVFEY D  +   +D +++G     +P  L++S  +Q  + V  CH H  +HRD+KP+N               G  R    P   YT  + T WYR
Sbjct:    1 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP-NLVNLLEV-----------------------FRRKRRLHLVFEYCDHTVLHELDRYQRG-----VPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPEN-ILITKHSVIKLCDFGFARLLAGPSDYYTDYVATRWYR 168          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CTK1_ENCCU (Probable CTD kinase subunit alpha homolog OS=Encephalitozoon cuniculi GN=CTK1 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 4.996e-21
Identity = 62/196 (31.63%), Postives = 93/196 (47.45%), Query Frame = 3
Query:   12 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            +YEK+  +GEGT+G+V  A+        ALKK   E  +EG+  T +REV +L+ +     +VRL+ V           P  D              +Y+VF Y   DL +FI S++       +  + I+   YQ+ +GV + HS G++HRDLK  N               G+ R +T    +YT  +VTLWYR
Sbjct:   21 EYEKIRIIGEGTFGQVILARKGRARY--ALKKVSKE--KEGLSVTTIREVQVLRAMGHPS-IVRLIEVVV--------EPGGD--------------IYMVFPYFPYDLNRFIRSNK-------MTCSEIKHIFYQIAQGVCYIHSKGIMHRDLKSAN-ILLDQKLNASIADFGMAR-YTTKTGAYTPGMVTLWYR 180          

HSP 2 Score: 44.2838 bits (103), Expect = 4.996e-21
Identity = 18/27 (66.67%), Postives = 23/27 (85.19%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEM 681
            APE+LLGS+ Y+ AVD+WS+GCI  EM
Sbjct:  181 APEILLGSSSYTYAVDIWSLGCILTEM 207          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDKL1_MOUSE (Cyclin-dependent kinase-like 1 OS=Mus musculus GN=Cdkl1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.779e-21
Identity = 65/198 (32.83%), Postives = 96/198 (48.48%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            MEKYEK+ K+GEG+YG V+K +++ TGQ+VA+K+     D+  I   ALRE+ +L+ L     +V LL V                          K  L+LVFEY D  +   +D +++G     +P  L+++  +Q  + V  CH H  +HRD+KP+N               G  R  T P   YT  + T WYR
Sbjct:    1 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKRFLETEDDPVIKKIALREIRMLKQLKHP-NLVNLLEVFR-----------------------RKRRLHLVFEYCDHTVLHELDRYQRG-----VPEPLVKNITWQTLQAVNFCHKHNCIHRDVKPEN-ILITKQSAIKLCDFGFARLLTGPGDYYTDYVATRWYR 168          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: SSN3_USTMA (Serine/threonine-protein kinase SSN3 OS=Ustilago maydis GN=SSN3 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.411e-20
Identity = 55/180 (30.56%), Postives = 86/180 (47.78%), Query Frame = 3
Query:   87 QLVALKKTRLEMDEE------GIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTH---EIVTLWYR 599
            Q+ A+KK + +  E       GI  +A+RE+SL + LS     V ++ +  V    K+                    +Y+VFEY + DL + I  H       P+P  +++S L+QL  GVA+ H++ +LHRDLKP N               GL R ++ PL+S  +    +VT+WYR
Sbjct:  220 QIYAIKKFKPDSKETDATIYTGISQSAMREISLNRELSH----VNIVTLHQVMLEDKA--------------------IYMVFEYAEHDLLQIIHYHSTALRA-PIPLAVLKSLLWQLINGVAYLHANWILHRDLKPAN-ILVTSQGVVKIGDLGLARLYSSPLQSLYNGDKVVVTIWYR 373          

HSP 2 Score: 49.6766 bits (117), Expect = 1.411e-20
Identity = 19/28 (67.86%), Postives = 26/28 (92.86%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMV 684
            APE+LLG+ HY+TA+DMWSVGCI+ E++
Sbjct:  374 APELLLGARHYTTAIDMWSVGCIWGELL 401          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: BUR1_DEBHA (Serine/threonine-protein kinase BUR1 OS=Debaryomyces hansenii GN=BUR1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.837e-20
Identity = 60/210 (28.57%), Postives = 100/210 (47.62%), Query Frame = 3
Query:    3 RMEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAF--TVPL---------KSYTHEIVTLWYR 599
            ++  YE ++K+G+GT+G V KA++  T +LVALK+      +EG P TA+RE+++L+ L+       L  ++ +    K +NP            + +   Y V  Y+ +DL   +++    PN   L  + I+ F+ QL  G+ + H    LHRD+K  N               GL R +  + P          ++YT  +VT WYR
Sbjct:   35 KLRNYEIIQKLGQGTFGVVQKARNIKTKELVALKQLINHSAKEGFPITAMREITILKKLNHKNI---LKIIDMIYEEPKISNPQ--------DILHQRGCFYTVSPYMCSDLVGLLEN----PNIN-LEVSHIKCFMEQLLHGIQYIHEQMFLHRDIKAAN-ILIDRNGTLKIADFGLARVYHGSPPKFMSGPGGGERAYTGLVVTRWYR 227          

HSP 2 Score: 45.8246 bits (107), Expect = 1.837e-20
Identity = 17/30 (56.67%), Postives = 23/30 (76.67%), Query Frame = 1
Query:  604 PEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            PE+LLG   Y+TAVDMW +GC+F E+  R+
Sbjct:  229 PELLLGERRYTTAVDMWGIGCVFGELFTRK 258          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: NLK2_XENTR (Serine/threonine protein kinase NLK2 OS=Xenopus tropicalis GN=nlk.2 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.848e-20
Identity = 56/191 (29.32%), Postives = 86/191 (45.03%), Query Frame = 3
Query:   33 VGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNP-SPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSY-THEIVTLWYR 599
            +G G +G V+   D   G+ VALKK         +P      VS  ++  +    +++LC    D+ L + +   P     F         +Y++ E + TDL K I S      P+PL    I+ FLYQ+ +G+ + HS G+LHRD+KP N               GL R   +    + T E+VT +YR
Sbjct:   73 IGYGAFGVVWSVTDPRDGKRVALKK---------MPNVFQNLVSCKRVFRE----LKMLCFFKHDNVLSALDILQPPQIDCF-------EEIYVITELMQTDLHKVIVS------PQPLSSDHIKVFLYQILRGLKYLHSAGILHRDIKPGN-LLVNSNCVLKICDFGLARVEELDESQHMTQEVVTQYYR 236          

HSP 2 Score: 53.1434 bits (126), Expect = 1.848e-20
Identity = 20/32 (62.50%), Postives = 29/32 (90.62%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQV 696
            APE+L+GS HY +A+D+WSVGCIFAE++ R++
Sbjct:  237 APEILMGSRHYRSAIDIWSVGCIFAELLGRRI 268          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: NLK2_XENLA (Serine/threonine protein kinase NLK2 OS=Xenopus laevis GN=nlk.2 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.848e-20
Identity = 56/191 (29.32%), Postives = 86/191 (45.03%), Query Frame = 3
Query:   33 VGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNP-SPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSY-THEIVTLWYR 599
            +G G +G V+   D   G+ VALKK         +P      VS  ++  +    +++LC    D+ L + +   P     F         +Y++ E + TDL K I S      P+PL    I+ FLYQ+ +G+ + HS G+LHRD+KP N               GL R   +    + T E+VT +YR
Sbjct:   66 IGYGAFGVVWSVTDPRDGKRVALKK---------MPNVFQNLVSCKRVFRE----LKMLCFFKHDNVLSALDILQPPQIDCF-------EEIYVITELMQTDLHKVIVS------PQPLSSDHIKVFLYQILRGLKYLHSAGILHRDIKPGN-LLVNSNCVLKICDFGLARVEELDESQHMTQEVVTQYYR 229          

HSP 2 Score: 53.1434 bits (126), Expect = 1.848e-20
Identity = 20/32 (62.50%), Postives = 29/32 (90.62%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQV 696
            APE+L+GS HY +A+D+WSVGCIFAE++ R++
Sbjct:  230 APEILMGSRHYRSAIDIWSVGCIFAELLGRRI 261          
The following BLAST results are available for this feature:
BLAST of CF417199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
SSN3_SCHPO1.742e-2129.47Serine/threonine-protein kinase prk1 OS=Schizosacc... [more]
SSN3_DEBHA2.931e-2127.95Serine/threonine-protein kinase SSN3 OS=Debaryomyc... [more]
MPK1_ORYSJ2.940e-2130.69Mitogen-activated protein kinase 1 OS=Oryza sativa... [more]
CDKL1_HUMAN3.043e-2133.33Cyclin-dependent kinase-like 1 OS=Homo sapiens GN=... [more]
CTK1_ENCCU4.996e-2131.63Probable CTD kinase subunit alpha homolog OS=Encep... [more]
CDKL1_MOUSE6.779e-2132.83Cyclin-dependent kinase-like 1 OS=Mus musculus GN=... [more]
SSN3_USTMA1.411e-2030.56Serine/threonine-protein kinase SSN3 OS=Ustilago m... [more]
BUR1_DEBHA1.837e-2028.57Serine/threonine-protein kinase BUR1 OS=Debaryomyc... [more]
NLK2_XENTR1.848e-2029.32Serine/threonine protein kinase NLK2 OS=Xenopus tr... [more]
NLK2_XENLA1.848e-2029.32Serine/threonine protein kinase NLK2 OS=Xenopus la... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-129 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-002_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417199 ID=CF417199; Name=CF417199; organism=Citrus sinensis; type=EST; length=697bp
AGAGGATGGAGAAGTACGAGAAGCTAGAGAAGGTGGGAGAAGGAACGTAC
GGGAAAGTGTACAAGGCAAAGGACAAAGCGACCGGGCAGTTGGTTGCTCT
GAAGAAAACAAGACTCGAAATGGATGAAGAAGGCATCCCCCCGACCGCTC
TCCGCGAAGTGTCCCTCCTCCAGATGCTCTCTCAATCCCTTTACGTCGTC
CGCCTCCTCTGCGTCGAACACGTGGACTCCTCTCTCAAATCCAACAACCC
CAGCCCCGACTCCGCTTCCGCCTTCGCCACCTCCAACAACGGCAAGTCTA
ATCTCTATCTCGTGTTTGAATACCTCGACACCGATCTAAAGAAATTCATC
GACTCGCACCGCAAGGGCCCCAATCCGAGGCCGCTGCCCCCCACTCTCAT
TCAGAGCTTCTTGTACCAGCTTTGCAAAGGCGTCGCCCACTGCCACAGCC
ACGGTGTCCTTCATCGCGACCTGAAGCCGCAGAATCTTCTCCTTGATAAG
GACAAGGGGATTCTCAAGATCGCCGATCTTGGCCTCGGACGCGCCTTCAC
CGTTCCTCTCAAAAGCTATACCCACGAGATTGTTACTCTCTGGTATAGGG
GCTCCCGAGGTGCTTCTTGGTTCCACTCATTACTCCACTGCTGTCGACAT
GTGGTCCGTTGGTTGCATTTTCGCTGAGATGGTTAAAAGGCAGGTTT
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