CF417199

Overview
NameCF417199
Unique NameCF417199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDKL3_MACFA (Cyclin-dependent kinase-like 3 OS=Macaca fascicularis GN=CDKL3 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 3.110e-20
Identity = 58/198 (29.29%), Postives = 89/198 (44.95%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            ME YE L KVGEG+YG V K K K TGQ+VA+ K   E  E+ +   A+RE+  L+       +V L+ V                          K  ++LVFE++D  +   +  +  G     L    ++ +L+Q+ + + + HS+ ++HRD+KP+N               G  R    P   YT  + T WYR
Sbjct:    1 MEMYETLGKVGEGSYGTVMKCKHKNTGQIVAI-KIFYERPEQSVNKIAMREIKFLKQFHHE-NLVNLIEV-----------------------FRQKKKIHLVFEFIDHTVLDELQHYCHG-----LESKRLRKYLFQILRAIDYLHSNNIIHRDIKPEN-ILVSQSGITKLCDFGFARTLAAPGDIYTDYVATRWYR 167          

HSP 2 Score: 34.6538 bits (78), Expect = 3.110e-20
Identity = 13/27 (48.15%), Postives = 19/27 (70.37%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEM 681
            APE++L  T Y   VD+W++GC+  EM
Sbjct:  168 APELVLKDTSYGKPVDIWALGCMIIEM 194          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDKL3_HUMAN (Cyclin-dependent kinase-like 3 OS=Homo sapiens GN=CDKL3 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 3.110e-20
Identity = 58/198 (29.29%), Postives = 89/198 (44.95%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            ME YE L KVGEG+YG V K K K TGQ+VA+ K   E  E+ +   A+RE+  L+       +V L+ V                          K  ++LVFE++D  +   +  +  G     L    ++ +L+Q+ + + + HS+ ++HRD+KP+N               G  R    P   YT  + T WYR
Sbjct:    1 MEMYETLGKVGEGSYGTVMKCKHKNTGQIVAI-KIFYERPEQSVNKIAMREIKFLKQFHHE-NLVNLIEV-----------------------FRQKKKIHLVFEFIDHTVLDELQHYCHG-----LESKRLRKYLFQILRAIDYLHSNNIIHRDIKPEN-ILVSQSGITKLCDFGFARTLAAPGDIYTDYVATRWYR 167          

HSP 2 Score: 34.6538 bits (78), Expect = 3.110e-20
Identity = 13/27 (48.15%), Postives = 19/27 (70.37%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEM 681
            APE++L  T Y   VD+W++GC+  EM
Sbjct:  168 APELVLKDTSYGKPVDIWALGCMIIEM 194          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDKL1_RAT (Cyclin-dependent kinase-like 1 OS=Rattus norvegicus GN=Cdkl1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.364e-20
Identity = 62/198 (31.31%), Postives = 93/198 (46.97%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            MEKYEK+ K+GEG+YG V+K +++ TGQ+VA+K+     D+  I   ALRE+ +L+ L                         P+  S        K  L+LVFEY    +   +D +++G     +P  L+++  +Q  + V  CH H  +HRD+KP+N               G  R  T P   YT  + T WYR
Sbjct:    1 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKRFLETEDDPVIKKIALREIRMLKQLKH-----------------------PNLVSLLEVFRR-KRRLHLVFEYCHHTVLHELDRYQRG-----VPEPLVKNITWQTLQAVNFCHKHNCIHRDVKPEN-ILITKHSVIKLCDFGFARLLTGPGDYYTDYVATRWYR 168          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: SSN3_CANGA (Serine/threonine-protein kinase SSN3 OS=Candida glabrata GN=SSN3 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.048e-20
Identity = 39/105 (37.14%), Postives = 61/105 (58.10%), Query Frame = 3
Query:  294 KSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKS-YTHE--IVTLWYR 599
            K ++Y+V+E+ + DL + I  H   P  R +PP +I+S ++Q+  GV++ H + VLHRDLKP N               GL R F+  L++ YT +  +VT+WYR
Sbjct:  236 KKSIYMVYEFAEHDLLQIIHFHSH-PEKRMIPPRMIRSIMWQILDGVSYLHQNWVLHRDLKPAN-IMVTMDGVVKIGDLGLARKFSNMLQTMYTGDKVVVTIWYR 338          

HSP 2 Score: 49.6766 bits (117), Expect = 4.048e-20
Identity = 19/31 (61.29%), Postives = 27/31 (87.10%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            APE+LLG+ HY+ A+D+W+VGCIFAE++  Q
Sbjct:  339 APELLLGARHYTPAIDLWAVGCIFAELIGLQ 369          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: NLK_MOUSE (Serine/threonine protein kinase NLK OS=Mus musculus GN=Nlk PE=1 SV=2)

HSP 1 Score: 63.5438 bits (153), Expect = 4.054e-20
Identity = 55/191 (28.80%), Postives = 86/191 (45.03%), Query Frame = 3
Query:   33 VGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNP-SPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTV-PLKSYTHEIVTLWYR 599
            +G G +G V+   D   G+ VALKK         +P      VS  ++  +    +++LC    D+ L + +   P     F         +Y+V E + +DL K I S      P+PL    ++ FLYQ+ +G+ + HS G+LHRD+KP N               GL R   +   +  T E+VT +YR
Sbjct:  144 IGYGAFGVVWSVTDPRDGKRVALKK---------MPNVFQNLVSCKRVFRE----LKMLCFFKHDNVLSALDILQPPHIDYF-------EEIYVVTELMQSDLHKIIVS------PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGN-LLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYR 307          

HSP 2 Score: 54.6842 bits (130), Expect = 4.054e-20
Identity = 21/32 (65.62%), Postives = 29/32 (90.62%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQV 696
            APE+L+GS HYS A+D+WSVGCIFAE++ R++
Sbjct:  308 APEILMGSRHYSNAIDIWSVGCIFAELLGRRI 339          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: NLK_HUMAN (Serine/threonine protein kinase NLK OS=Homo sapiens GN=NLK PE=1 SV=2)

HSP 1 Score: 63.5438 bits (153), Expect = 4.054e-20
Identity = 55/191 (28.80%), Postives = 86/191 (45.03%), Query Frame = 3
Query:   33 VGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNP-SPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTV-PLKSYTHEIVTLWYR 599
            +G G +G V+   D   G+ VALKK         +P      VS  ++  +    +++LC    D+ L + +   P     F         +Y+V E + +DL K I S      P+PL    ++ FLYQ+ +G+ + HS G+LHRD+KP N               GL R   +   +  T E+VT +YR
Sbjct:  144 IGYGAFGVVWSVTDPRDGKRVALKK---------MPNVFQNLVSCKRVFRE----LKMLCFFKHDNVLSALDILQPPHIDYF-------EEIYVVTELMQSDLHKIIVS------PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGN-LLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYR 307          

HSP 2 Score: 54.6842 bits (130), Expect = 4.054e-20
Identity = 21/32 (65.62%), Postives = 29/32 (90.62%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQV 696
            APE+L+GS HYS A+D+WSVGCIFAE++ R++
Sbjct:  308 APEILMGSRHYSNAIDIWSVGCIFAELLGRRI 339          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: MPK6_ORYSJ (Mitogen-activated protein kinase 6 OS=Oryza sativa subsp. japonica GN=MPK6 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 4.083e-20
Identity = 57/192 (29.69%), Postives = 84/192 (43.75%), Query Frame = 3
Query:   24 LEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            +  +G G YG V  A +   G+ VA+KK     D        LRE+ LL+ +        ++ ++ +    + +N                +++Y+V E +DTDL + I S++      PL     Q FLYQL +G+ + HS  VLHRDLKP N               GL R  T      T  +VT WYR
Sbjct:   46 IRPIGRGAYGIVCAAVNSENGEEVAIKKIGNAFDNHIDAKRTLREIKLLRHMDHE----NIIAIKDIIRPPRRDN---------------FNDVYIVSELMDTDLHQIIRSNQ------PLTDDHCQYFLYQLLRGLKYVHSANVLHRDLKPSN-LFLNANCDLKIADFGLART-TTETDLMTEYVVTRWYR 210          

HSP 2 Score: 44.669 bits (104), Expect = 4.083e-20
Identity = 18/31 (58.06%), Postives = 24/31 (77.42%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            APE+LL  + Y+ A+D+WSVGCI  E+V RQ
Sbjct:  211 APELLLNCSQYTAAIDVWSVGCILGEIVTRQ 241          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: HOG1_HORWE (Mitogen-activated protein kinase HOG1 OS=Hortaea werneckii GN=HOG1 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.086e-20
Identity = 54/158 (34.18%), Postives = 75/158 (47.47%), Query Frame = 3
Query:   12 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQN 485
            +Y  L+ VG G +G V  AKD+ T Q VA+KK         +     RE+ LL+ L        ++C+  +  S     P  D              +Y+V E L TDL + + S       RPL    IQ FLYQ+ +G+ + HS GV+HRDLKP N
Sbjct:   19 RYTDLQPVGMGAFGLVCSAKDQLTSQAVAVKKIMKPFSTPVLSKRTYRELKLLKHLRHE----NIICLSDIFIS-----PLED--------------MYVVTELLGTDLHRLLTS-------RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSN 146          

HSP 2 Score: 39.6614 bits (91), Expect = 4.086e-20
Identity = 16/29 (55.17%), Postives = 21/29 (72.41%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVK 687
            APE++L    Y   VD+WS GCIFAEM++
Sbjct:  181 APEIMLTWQKYDVEVDIWSAGCIFAEMLE 209          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: HOG1_MYCGR (Mitogen-activated protein kinase Hog1 OS=Mycosphaerella graminicola GN=Hog1 PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.087e-20
Identity = 55/158 (34.81%), Postives = 73/158 (46.20%), Query Frame = 3
Query:   12 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQN 485
            +Y  L+ VG G +G V  AKD+ TGQ VA+KK         +     RE+ LL+ L     +           SL     SP              ++Y V E L TDL + + S       RPL    IQ FLYQ+ +G+ + HS GV+HRDLKP N
Sbjct:   19 RYTDLQPVGMGAFGLVCSAKDQLTGQAVAVKKIMKPFSTPVLSKRTYRELKLLKHLKHENVI-----------SLSDIFISP------------LEDIYFVTELLGTDLHRLLTS-------RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSN 146          

HSP 2 Score: 39.6614 bits (91), Expect = 4.087e-20
Identity = 16/29 (55.17%), Postives = 21/29 (72.41%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVK 687
            APE++L    Y   VD+WS GCIFAEM++
Sbjct:  181 APEIMLTWQKYDVEVDIWSAGCIFAEMLE 209          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: BUR1_ASHGO (Serine/threonine-protein kinase BUR1 OS=Ashbya gossypii GN=BUR1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 5.237e-20
Identity = 58/208 (27.88%), Postives = 98/208 (47.12%), Query Frame = 3
Query:   15 YEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPR-PLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAF---TVPLK---------SYTHEIVTLWYR 599
            Y++ +K+G+GT+G+VY+    AT + VA+KK  ++ + +  P TA RE+++L+ L+    V  +  V     +        DS+ A A+++  KS  Y++  Y+  DL   +       NPR  L    I++ + Q+ +G+ + H    +HRD+K  N               GL R +      LK          YT  +VT WYR
Sbjct:   56 YKEEKKLGQGTFGEVYRGVHLATQRQVAMKKILVKTENDLFPITAQREITILKRLNHRNVVQLIEMVYDYPPAQNGAAYGQDSSQASASADTMKS-FYMILPYMVADLSGILH------NPRVTLEMADIKNMMLQILEGINYIHCKKFMHRDIKTAN-ILLDHKGILKIADFGLARNYYGAPPNLKYPGGAGTDAKYTSVVVTRWYR 255          

HSP 2 Score: 45.4394 bits (106), Expect = 5.237e-20
Identity = 16/31 (51.61%), Postives = 26/31 (83.87%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            APE++LG  +Y+TAVD+W +GC+FAE  +++
Sbjct:  256 APELVLGDKNYTTAVDIWGIGCVFAEFFEKR 286          
The following BLAST results are available for this feature:
BLAST of CF417199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
CDKL3_MACFA3.110e-2029.29Cyclin-dependent kinase-like 3 OS=Macaca fascicula... [more]
CDKL3_HUMAN3.110e-2029.29Cyclin-dependent kinase-like 3 OS=Homo sapiens GN=... [more]
CDKL1_RAT3.364e-2031.31Cyclin-dependent kinase-like 1 OS=Rattus norvegicu... [more]
SSN3_CANGA4.048e-2037.14Serine/threonine-protein kinase SSN3 OS=Candida gl... [more]
NLK_MOUSE4.054e-2028.80Serine/threonine protein kinase NLK OS=Mus musculu... [more]
NLK_HUMAN4.054e-2028.80Serine/threonine protein kinase NLK OS=Homo sapien... [more]
MPK6_ORYSJ4.083e-2029.69Mitogen-activated protein kinase 6 OS=Oryza sativa... [more]
HOG1_HORWE4.086e-2034.18Mitogen-activated protein kinase HOG1 OS=Hortaea w... [more]
HOG1_MYCGR4.087e-2034.81Mitogen-activated protein kinase Hog1 OS=Mycosphae... [more]
BUR1_ASHGO5.237e-2027.88Serine/threonine-protein kinase BUR1 OS=Ashbya gos... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-129 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-002_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417199 ID=CF417199; Name=CF417199; organism=Citrus sinensis; type=EST; length=697bp
AGAGGATGGAGAAGTACGAGAAGCTAGAGAAGGTGGGAGAAGGAACGTAC
GGGAAAGTGTACAAGGCAAAGGACAAAGCGACCGGGCAGTTGGTTGCTCT
GAAGAAAACAAGACTCGAAATGGATGAAGAAGGCATCCCCCCGACCGCTC
TCCGCGAAGTGTCCCTCCTCCAGATGCTCTCTCAATCCCTTTACGTCGTC
CGCCTCCTCTGCGTCGAACACGTGGACTCCTCTCTCAAATCCAACAACCC
CAGCCCCGACTCCGCTTCCGCCTTCGCCACCTCCAACAACGGCAAGTCTA
ATCTCTATCTCGTGTTTGAATACCTCGACACCGATCTAAAGAAATTCATC
GACTCGCACCGCAAGGGCCCCAATCCGAGGCCGCTGCCCCCCACTCTCAT
TCAGAGCTTCTTGTACCAGCTTTGCAAAGGCGTCGCCCACTGCCACAGCC
ACGGTGTCCTTCATCGCGACCTGAAGCCGCAGAATCTTCTCCTTGATAAG
GACAAGGGGATTCTCAAGATCGCCGATCTTGGCCTCGGACGCGCCTTCAC
CGTTCCTCTCAAAAGCTATACCCACGAGATTGTTACTCTCTGGTATAGGG
GCTCCCGAGGTGCTTCTTGGTTCCACTCATTACTCCACTGCTGTCGACAT
GTGGTCCGTTGGTTGCATTTTCGCTGAGATGGTTAAAAGGCAGGTTT
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