CF417310
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417310 vs. ExPASy Swiss-Prot
Match: RLA2_CLAHE (60S acidic ribosomal protein P2 OS=Cladosporium herbarum GN=CLAH5 PE=1 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 2.463e-16 Identity = 38/69 (55.07%), Postives = 57/69 (82.61%), Query Frame = 2 Query: 8 MRYVAAYLLAVLGGNAAPSSADVEKILSSVGIEADAEKLKKVISELKGKNVEELIASGREKLSSMPVGG 214 M+Y+AA+LL L GN++PS+ D++ +LSSVGI+AD E+L ++ EL+GK++ ELI+SG EKL+S+P GG Sbjct: 1 MKYLAAFLLLGLAGNSSPSAEDIKTVLSSVGIDADEERLSSLLKELEGKDINELISSGSEKLASVPSGG 69
BLAST of CF417310 vs. ExPASy Swiss-Prot
Match: RLA2_PARAR (60S acidic ribosomal protein P2 OS=Parthenium argentatum PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.216e-16 Identity = 37/69 (53.62%), Postives = 59/69 (85.51%), Query Frame = 2 Query: 8 MRYVAAYLLAVLGGNAAPSSADVEKILSSVGIEADAEKLKKVISELKGKNVEELIASGREKLSSMPVGG 214 M+ +AA+LLA+LGGN +P+ D++ IL+SVG +AD +K++ ++S++KGK++ ELIASGRE+L+S+P GG Sbjct: 1 MKVIAAFLLALLGGNTSPTDEDLKSILASVGADADDDKIELLLSQVKGKDITELIASGRERLASVPSGG 69
BLAST of CF417310 vs. ExPASy Swiss-Prot
Match: RLA22_ARATH (60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana GN=RPP2B PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.222e-15 Identity = 39/69 (56.52%), Postives = 56/69 (81.16%), Query Frame = 2 Query: 8 MRYVAAYLLAVLGGNAAPSSADVEKILSSVGIEADAEKLKKVISELKGKNVEELIASGREKLSSMPVGG 214 M+ VAAYLLAVL G A+P+SAD++ IL SVG E + +++ ++ E+KGK++ ELIA+GREKL+S+P GG Sbjct: 1 MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGG 69
BLAST of CF417310 vs. ExPASy Swiss-Prot
Match: RLA4_CANAL (60S acidic ribosomal protein P2-B OS=Candida albicans GN=RPP2B PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 4.644e-15 Identity = 35/69 (50.72%), Postives = 55/69 (79.71%), Query Frame = 2 Query: 8 MRYVAAYLLAVLGGNAAPSSADVEKILSSVGIEADAEKLKKVISELKGKNVEELIASGREKLSSMPVGG 214 M+Y+AAYLL V GGN +PS++D+ +L SVG+EA+ +L+ ++ +L+GK+++ELIA G KL+S+P GG Sbjct: 1 MKYLAAYLLLVQGGNTSPSASDITALLESVGVEAEESRLQALLKDLEGKDLQELIAEGNTKLASVPSGG 69
BLAST of CF417310 vs. ExPASy Swiss-Prot
Match: RLA2_CAEEL (60S acidic ribosomal protein P2 OS=Caenorhabditis elegans GN=rpa-2 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 4.644e-15 Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 2 Query: 8 MRYVAAYLLAVLGGNAAPSSADVEKILSSVGIEADAEKLKKVISELKGKNVEELIASGREKLSSMPVGG 214 M+Y+ AYLLA LGGNA+PS+ DV K+L + G++ D E V+ LKGK + E+IA G+ KLSS+P GG Sbjct: 1 MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKVKLSSVPSGG 69
BLAST of CF417310 vs. ExPASy Swiss-Prot
Match: RLA24_ARATH (60S acidic ribosomal protein P2-4 OS=Arabidopsis thaliana GN=RPP2D PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.035e-14 Identity = 36/69 (52.17%), Postives = 54/69 (78.26%), Query Frame = 2 Query: 8 MRYVAAYLLAVLGGNAAPSSADVEKILSSVGIEADAEKLKKVISELKGKNVEELIASGREKLSSMPVGG 214 M+ AA+LLAVLGGNA PS+ +++ I+ +VG + D E ++ ++ E+ GK++ ELIASGREKL+S+P GG Sbjct: 1 MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGREKLASVPSGG 69
BLAST of CF417310 vs. ExPASy Swiss-Prot
Match: RLA2_RHOGU (60S acidic ribosomal protein P2 OS=Rhodotorula glutinis PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.351e-14 Identity = 37/69 (53.62%), Postives = 54/69 (78.26%), Query Frame = 2 Query: 8 MRYVAAYLLAVLGGNAAPSSADVEKILSSVGIEADAEKLKKVISELKGKNVEELIASGREKLSSMPVGG 214 M++VAAYLL V GN +PS+ DV+K+L++ I+AD E+L +I EL+GK+V E+IA G +KL+S+P GG Sbjct: 1 MKHVAAYLLLVSAGNTSPSAEDVKKVLAAADIQADEERLSVLIKELEGKDVNEVIAEGSKKLASVPSGG 69
BLAST of CF417310 vs. ExPASy Swiss-Prot
Match: RLA21_ARATH (60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana GN=RPP2A PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 2.305e-14 Identity = 36/69 (52.17%), Postives = 55/69 (79.71%), Query Frame = 2 Query: 8 MRYVAAYLLAVLGGNAAPSSADVEKILSSVGIEADAEKLKKVISELKGKNVEELIASGREKLSSMPVGG 214 M+ VAA+LLAVL G A+P++ D++ IL SVG E + +++ ++ E+KGK++ ELIA+GREKL+S+P GG Sbjct: 1 MKVVAAFLLAVLSGKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGG 69
BLAST of CF417310 vs. ExPASy Swiss-Prot
Match: RLA4_YEAST (60S acidic ribosomal protein P2-beta OS=Saccharomyces cerevisiae GN=RPP2B PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 3.010e-14 Identity = 35/70 (50.00%), Postives = 56/70 (80.00%), Query Frame = 2 Query: 8 MRYVAAYLLAVLGGNAAPSSADVEKILSSVGIEADAEKLKKVISELKGK-NVEELIASGREKLSSMPVGG 214 M+Y+AAYLL V GGNAAPS+AD++ ++ SVG E D ++ +++S L+GK ++EE+IA G++K +++P GG Sbjct: 1 MKYLAAYLLLVQGGNAAPSAADIKAVVESVGAEVDEARINELLSSLEGKGSLEEIIAEGQKKFATVPTGG 70
BLAST of CF417310 vs. ExPASy Swiss-Prot
Match: RLA2_EIMTE (60S acidic ribosomal protein P2 OS=Eimeria tenella PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 3.010e-14 Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = 2 Query: 8 MRYVAAYLLAVLGGNAAPSSADVEKILSSVGIEADAEKLKKVISELKGKNVEELIASGREKLSSMPVGG 214 M+YVAAYL+ VLGGN AP++ADV ++L VG E + E LK +I ++GK E+I++G EKL +P GG Sbjct: 1 MKYVAAYLMTVLGGNEAPTAADVSRVLEPVGAEVNPEVLKTLIDAMQGKAAHEVISAGLEKLQKVPCGG 69 The following BLAST results are available for this feature:
BLAST of CF417310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417310 ID=CF417310; Name=CF417310; organism=Citrus sinensis; type=EST; length=450bpback to top |