CF417320
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417320 vs. ExPASy Swiss-Prot
Match: SODC_ASPNC (Superoxide dismutase [Cu-Zn] OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sodC PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 6.989e-22 Identity = 45/98 (45.92%), Postives = 59/98 (60.20%), Query Frame = 3 Query: 306 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPH-GFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQI 593 ++G S V G VT Q + PTT++ +TG GFH+H++GD TNGC S G HFNP THGAP+D+ RH GDLGN +A G A + D + Sbjct: 8 IRGDSKVSGTVTFEQANENTPTTISWNITGHDANAERGFHVHQFGDNTNGCTSAGPHFNPFGKTHGAPEDDERHVGDLGNFKTDAEGNAVGSKQDKLV 105 HSP 2 Score: 31.5722 bits (70), Expect = 6.989e-22 Identity = 14/27 (51.85%), Postives = 18/27 (66.67%), Query Frame = 1 Query: 604 GPNTVVGRAFVXHELEDDLGKGGHELS 684 G +V+GR V H DDLG+GG+E S Sbjct: 109 GAESVLGRTLVVHAGTDDLGRGGNEES 135
BLAST of CF417320 vs. ExPASy Swiss-Prot
Match: SODC1_DEBHA (Superoxide dismutase [Cu-Zn] 1 OS=Debaryomyces hansenii GN=SOD1 PE=1 SV=4) HSP 1 Score: 92.4337 bits (228), Expect = 9.094e-22 Identity = 44/95 (46.32%), Postives = 58/95 (61.05%), Query Frame = 3 Query: 306 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGP-HGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVD 584 L+G S V GVV Q + PTT+ ++G GFH+H +GD TNGC S G HFNP HGAP+D+ RH GDLGN+ + +GVA+ + D Sbjct: 8 LRGDSKVSGVVNFEQSSESDPTTITWEISGNDANALRGFHVHTFGDNTNGCTSAGPHFNPFTKEHGAPEDDNRHVGDLGNVTTDTSGVAKGSKQD 102 HSP 2 Score: 31.9574 bits (71), Expect = 9.094e-22 Identity = 13/24 (54.17%), Postives = 17/24 (70.83%), Query Frame = 1 Query: 604 GPNTVVGRAFVXHELEDDLGKGGH 675 G N+++GR V H DDLGKGG+ Sbjct: 109 GQNSILGRTVVIHAGTDDLGKGGN 132
BLAST of CF417320 vs. ExPASy Swiss-Prot
Match: SODC_PAESI (Superoxide dismutase [Cu-Zn] OS=Paecilomyces sinensis GN=SOD1 PE=3 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 1.183e-21 Identity = 42/98 (42.86%), Postives = 58/98 (59.18%), Query Frame = 3 Query: 306 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGL-TPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQI 593 L+G S + G+V QE D PTT++ ++ GFH+ +GD TNGC S G HFNP+ THG DE RH GD+GNI + +G ++ +I D I Sbjct: 8 LRGDSKITGIVNFEQESDSSPTTISWEISNHDADAKRGFHITPFGDNTNGCTSAGPHFNPHGKTHGNVTDENRHVGDMGNIETDCDGNSKGSIKDKLI 105 HSP 2 Score: 36.965 bits (84), Expect = 1.183e-21 Identity = 16/28 (57.14%), Postives = 21/28 (75.00%), Query Frame = 1 Query: 604 GPNTVVGRAFVXHELEDDLGKGGHELSL 687 GP++V+GR V H DDLGKGG++ SL Sbjct: 109 GPHSVIGRTVVIHAGTDDLGKGGNDESL 136
BLAST of CF417320 vs. ExPASy Swiss-Prot
Match: SODC_SCHPO (Superoxide dismutase [Cu-Zn] OS=Schizosaccharomyces pombe GN=sod1 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.712e-21 Identity = 45/98 (45.92%), Postives = 56/98 (57.14%), Query Frame = 3 Query: 306 LKGTSNVEGVVTLTQED-GGPTTVNVRVTGLTPGP-HGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQI 593 L+G S V GVVT Q D +V V + G GFH+H++GD TNGC S G HFNP THG VRH GDLGN+ ++A G + T D+ I Sbjct: 8 LRGDSKVSGVVTFEQVDQNSQVSVIVDLVGNDANAKRGFHIHQFGDNTNGCTSAGPHFNPEGKTHGDRTAAVRHVGDLGNLESDAQGNIKTTFSDSVI 105 HSP 2 Score: 35.4242 bits (80), Expect = 9.712e-21 Identity = 16/28 (57.14%), Postives = 19/28 (67.86%), Query Frame = 1 Query: 604 GPNTVVGRAFVXHELEDDLGKGGHELSL 687 G N+++GR V H EDDLGKG E SL Sbjct: 109 GANSIIGRTIVIHAGEDDLGKGTSEESL 136
BLAST of CF417320 vs. ExPASy Swiss-Prot
Match: SODC_DROOB (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila obscura GN=Sod PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20 Identity = 48/92 (52.17%), Postives = 58/92 (63.04%), Query Frame = 3 Query: 321 NVEGVVTLTQEDG-GPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQI 593 + +G V QE P V V GLT G HGFH+HE+GD TNGCMS+G HFNP + HGAP DE RH GDLGNI A + +I D++I Sbjct: 4 DAKGTVFFEQETSEAPVKVTGEVLGLTKGLHGFHVHEFGDNTNGCMSSGPHFNPRSKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSKI 95
BLAST of CF417320 vs. ExPASy Swiss-Prot
Match: SODC_DROMD (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila madeirensis GN=Sod PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20 Identity = 47/92 (51.09%), Postives = 58/92 (63.04%), Query Frame = 3 Query: 321 NVEGVVTLTQEDG-GPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQI 593 + +G+V QE P V V GL G HGFH+HE+GD TNGCMS+G H+NP N HGAP DE RH GDLGNI A + +I D++I Sbjct: 4 DAKGIVFFEQETSEAPVKVTGEVLGLAKGLHGFHVHEFGDNTNGCMSSGPHYNPRNKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSKI 95
BLAST of CF417320 vs. ExPASy Swiss-Prot
Match: SODE_CAEEL (Extracellular superoxide dismutase [Cu-Zn] OS=Caenorhabditis elegans GN=sod-4 PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 2.108e-20 Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 351 EDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDN 587 + G +N V+GL G HGFH+HE GDT NGC+S G H+NP+ ++HGAP D RH GDLGNI + A+G ++ D+ Sbjct: 48 QSGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIESPASGDTLISVSDS 126 HSP 2 Score: 29.6462 bits (65), Expect = 2.108e-20 Identity = 12/27 (44.44%), Postives = 18/27 (66.67%), Query Frame = 1 Query: 604 GPNTVVGRAFVXHELEDDLGKGGHELS 684 G +++GR+ V HE DDLG+G + S Sbjct: 132 GQYSIIGRSVVIHEKTDDLGRGTSDQS 158
BLAST of CF417320 vs. ExPASy Swiss-Prot
Match: SODC_ASPOR (Superoxide dismutase [Cu-Zn] OS=Aspergillus oryzae GN=sodC PE=3 SV=3) HSP 1 Score: 92.4337 bits (228), Expect = 3.618e-20 Identity = 47/98 (47.96%), Postives = 57/98 (58.16%), Query Frame = 3 Query: 306 LKGTSNVEGVVTLTQEDGG-PTTVNVRVTGLTPGPH-GFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQI 593 L+G S + G VT Q D PTTV+ +TG FH+H++GD TNGC S G HFNP HGAP+DE RH GDLGN +A G A + D I Sbjct: 8 LRGDSKISGTVTFEQADANAPTTVSWNITGHDANAERAFHVHQFGDNTNGCTSAGPHFNPFGKEHGAPEDENRHVGDLGNFKTDAEGNAVGSKQDKLI 105 HSP 2 Score: 26.5646 bits (57), Expect = 3.618e-20 Identity = 11/24 (45.83%), Postives = 14/24 (58.33%), Query Frame = 1 Query: 604 GPNTVVGRAFVXHELEDDLGKGGH 675 G +V+GR V H DDLG+ H Sbjct: 109 GAESVLGRTLVIHAGTDDLGRSEH 132
BLAST of CF417320 vs. ExPASy Swiss-Prot
Match: SODC_DROTO (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila tolteca GN=Sod PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.368e-20 Identity = 47/92 (51.09%), Postives = 57/92 (61.96%), Query Frame = 3 Query: 321 NVEGVVTLTQEDG-GPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQI 593 + +G V QE P V V GLT G HGFH+HE+G+ TNGCMS+G HFNP N HGAP D RH GDLGNI A + +I D++I Sbjct: 4 DAKGTVFFEQETSEAPVKVTGEVLGLTKGLHGFHVHEFGNNTNGCMSSGPHFNPGNKEHGAPTDGNRHLGDLGNIQAAGDSPTAVSITDSKI 95
BLAST of CF417320 vs. ExPASy Swiss-Prot
Match: SODC_DROPE (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila persimilis GN=Sod PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.368e-20 Identity = 47/92 (51.09%), Postives = 56/92 (60.87%), Query Frame = 3 Query: 321 NVEGVVTLTQEDG-GPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQI 593 + +G V QE P V GL G HGFH+HE+GD TNGCMS+G HFNP N HGAP DE RH GDLGNI A + +I D++I Sbjct: 4 DAKGTVFFEQETSEAPVKVTGEGLGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPRNKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSKI 95 The following BLAST results are available for this feature:
BLAST of CF417320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417320 ID=CF417320; Name=CF417320; organism=Citrus sinensis; type=EST; length=689bpback to top |