CF417320
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417320 vs. ExPASy Swiss-Prot
Match: SODC_CEREL (Superoxide dismutase [Cu-Zn] OS=Cervus elaphus GN=SOD1 PE=2 SV=3) HSP 1 Score: 108.227 bits (269), Expect = 1.725e-27 Identity = 50/96 (52.08%), Postives = 62/96 (64.58%), Query Frame = 3 Query: 306 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQI 593 LKG V+G + + G V +TGLT G HGFH+H++GD T GC S G HFNP + HG PKDE RH GDLGN+ A+ NGVA+ IVD+ I Sbjct: 9 LKGDGPVQGTIRF-EAKGHTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAKVDIVDSLI 103 HSP 2 Score: 35.4242 bits (80), Expect = 1.725e-27 Identity = 14/27 (51.85%), Postives = 20/27 (74.07%), Query Frame = 1 Query: 604 GPNTVVGRAFVXHELEDDLGKGGHELS 684 G ++++GR V HE DDLG+GG+E S Sbjct: 107 GEHSIIGRTMVVHEKPDDLGRGGNEES 133
BLAST of CF417320 vs. ExPASy Swiss-Prot
Match: SODC_XIPGL (Superoxide dismutase [Cu-Zn] OS=Xiphias gladius GN=sod1 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 1.725e-27 Identity = 50/95 (52.63%), Postives = 60/95 (63.16%), Query Frame = 3 Query: 306 LKGTSNVEGVVTLTQEDGGPTTVN--VRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVD 584 L+G G V QE G V + + GLTPG HGFH+H +GD TNGC+S G HFNP + H PKDE RH GDLGN+ A+ANGVA+ I D Sbjct: 9 LRGAGETTGTVYFEQE-GNANAVGKGIILKGLTPGEHGFHVHGFGDNTNGCISAGPHFNPASKKHAGPKDEDRHVGDLGNVTADANGVAKIDITD 102 HSP 2 Score: 39.2762 bits (90), Expect = 1.725e-27 Identity = 17/35 (48.57%), Postives = 23/35 (65.71%), Query Frame = 1 Query: 583 TTRYHWXGPNTVVGRAFVXHELEDDLGKGGHELSL 687 T + GP +++GR V HE DDLG+GG+E SL Sbjct: 101 TDKISLTGPYSIIGRTMVIHEKADDLGRGGNEESL 135
BLAST of CF417320 vs. ExPASy Swiss-Prot
Match: SODC_BOMMO (Superoxide dismutase [Cu-Zn] OS=Bombyx mori PE=1 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 2.921e-27 Identity = 50/93 (53.76%), Postives = 59/93 (63.44%), Query Frame = 3 Query: 321 NVEGVVTLTQEDG-GPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVA-NANGVAEATIVDNQI 593 +V G V Q+D P V+ V GLT G HGFH+HE+GD TNGC S GAHFNP HG P VRH GDLGNI A +GV + +I D+QI Sbjct: 12 DVSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQI 104 HSP 2 Score: 41.2022 bits (95), Expect = 2.921e-27 Identity = 17/27 (62.96%), Postives = 20/27 (74.07%), Query Frame = 1 Query: 604 GPNTVVGRAFVXHELEDDLGKGGHELS 684 GPN+++GR V H DDLG GGHELS Sbjct: 108 GPNSIIGRTLVVHADPDDLGLGGHELS 134
BLAST of CF417320 vs. ExPASy Swiss-Prot
Match: SODC_CANFA (Superoxide dismutase [Cu-Zn] OS=Canis familiaris GN=SOD1 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.923e-27 Identity = 49/96 (51.04%), Postives = 62/96 (64.58%), Query Frame = 3 Query: 306 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQI 593 LKG VEG + Q+ GP V+ +TGLT G HGFH+H++ D T GC S G HFNP + HG PKD+ RH GDLGN+ A +GVA +I D+ I Sbjct: 9 LKGQGPVEGTIHFVQKGSGPVVVSGTITGLTEGEHGFHVHQFEDXTQGCTSAGPHFNPLSKKHGGPKDQERHVGDLGNVTAGKDGVAIVSIEDSLI 104 HSP 2 Score: 33.113 bits (74), Expect = 2.923e-27 Identity = 14/27 (51.85%), Postives = 18/27 (66.67%), Query Frame = 1 Query: 604 GPNTVVGRAFVXHELEDDLGKGGHELS 684 G +++GR V HE DDLGKG +E S Sbjct: 108 GDYSIIGRTMVVHEKRDDLGKGDNEES 134
BLAST of CF417320 vs. ExPASy Swiss-Prot
Match: SODC_CEBAP (Superoxide dismutase [Cu-Zn] OS=Cebus apella GN=SOD1 PE=2 SV=3) HSP 1 Score: 105.916 bits (263), Expect = 3.802e-27 Identity = 49/97 (50.52%), Postives = 62/97 (63.92%), Query Frame = 3 Query: 306 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQI 593 LKG V+G + Q E GP V +TGL G HGFH+H++GD T GC S G HFNP + HG P+DE RH GDLGN+ A +GVA+ +I D+ I Sbjct: 9 LKGDGPVQGTINFEQKESNGPVKVWGSITGLAEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRKHGGPEDEERHVGDLGNVTAGKDGVAKVSIEDSVI 105 HSP 2 Score: 36.5798 bits (83), Expect = 3.802e-27 Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = 1 Query: 604 GPNTVVGRAFVXHELEDDLGKGGHELS 684 G ++++GR V HE DDLGKGG+E S Sbjct: 109 GDHSIIGRTLVVHEKADDLGKGGNEES 135
BLAST of CF417320 vs. ExPASy Swiss-Prot
Match: SODC_CALJA (Superoxide dismutase [Cu-Zn] OS=Callithrix jacchus GN=SOD1 PE=2 SV=3) HSP 1 Score: 105.916 bits (263), Expect = 3.802e-27 Identity = 49/97 (50.52%), Postives = 62/97 (63.92%), Query Frame = 3 Query: 306 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQI 593 LKG V+G + Q E GP V +TGL G HGFH+H++GD T GC S G HFNP + HG P+DE RH GDLGN+ A +GVA+ +I D+ I Sbjct: 9 LKGDGPVQGTINFEQKESNGPVKVWGSITGLAEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRKHGGPEDEERHVGDLGNVTAGKDGVAKVSIEDSVI 105 HSP 2 Score: 36.5798 bits (83), Expect = 3.802e-27 Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = 1 Query: 604 GPNTVVGRAFVXHELEDDLGKGGHELS 684 G ++++GR V HE DDLGKGG+E S Sbjct: 109 GDHSIIGRTLVVHEKADDLGKGGNEES 135
BLAST of CF417320 vs. ExPASy Swiss-Prot
Match: SODC_PAETN (Superoxide dismutase [Cu-Zn] OS=Paecilomyces tenuipes GN=SOD1 PE=3 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 3.802e-27 Identity = 49/98 (50.00%), Postives = 63/98 (64.29%), Query Frame = 3 Query: 306 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGPH-GFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQI 593 L+G + V G VT QE + PTT+ +TG P GFH+H +GD TNGC S G HFNP+ THGAP D RH GDLGN+ +A G A+ +I D+Q+ Sbjct: 8 LRGDAKVGGTVTFEQESESAPTTITYDLTGNDPNAERGFHIHTFGDNTNGCTSAGPHFNPHGKTHGAPTDAARHVGDLGNVKTDAQGNAKGSIQDSQV 105 HSP 2 Score: 38.1206 bits (87), Expect = 3.802e-27 Identity = 17/28 (60.71%), Postives = 21/28 (75.00%), Query Frame = 1 Query: 604 GPNTVVGRAFVXHELEDDLGKGGHELSL 687 GP++V+GR V H DDLGKGG+E SL Sbjct: 109 GPHSVIGRTVVVHAGTDDLGKGGNEESL 136
BLAST of CF417320 vs. ExPASy Swiss-Prot
Match: SODC_CAEBR (Superoxide dismutase [Cu-Zn] OS=Caenorhabditis briggsae GN=sod-1 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 6.408e-27 Identity = 48/91 (52.75%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 324 VEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQI 593 V G + +TQ + P + + GLTPG HGFH+H+YGD+TNGC+S G HFNP THG P E RH GDLGN+ A A+GVA+ I D I Sbjct: 36 VSGTIWITQNSESDPAVIEGEIKGLTPGLHGFHVHQYGDSTNGCLSAGPHFNPFGKTHGGPNSETRHVGDLGNVEAGADGVAKVHITDKLI 126 HSP 2 Score: 32.3426 bits (72), Expect = 6.408e-27 Identity = 13/22 (59.09%), Postives = 17/22 (77.27%), Query Frame = 1 Query: 604 GPNTVVGRAFVXHELEDDLGKG 669 G NTV+GR+ V H +DDLG+G Sbjct: 130 GANTVIGRSMVVHAGQDDLGQG 151
BLAST of CF417320 vs. ExPASy Swiss-Prot
Match: SODC_BOSMU (Superoxide dismutase [Cu-Zn] OS=Bos mutus grunniens GN=SOD1 PE=2 SV=3) HSP 1 Score: 107.071 bits (266), Expect = 8.396e-27 Identity = 50/96 (52.08%), Postives = 61/96 (63.54%), Query Frame = 3 Query: 306 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQI 593 LKG V+G + + G V +TGLT G HGFH+H++GD T GC S G HFNP + HG PKDE RH GDLGN+ A+ NGVA IVD+ I Sbjct: 9 LKGDGPVQGTIHF-EAKGDTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAVVDIVDSLI 103 HSP 2 Score: 34.2686 bits (77), Expect = 8.396e-27 Identity = 14/27 (51.85%), Postives = 19/27 (70.37%), Query Frame = 1 Query: 604 GPNTVVGRAFVXHELEDDLGKGGHELS 684 G +++GR V HE DDLG+GG+E S Sbjct: 107 GEYSIIGRTMVVHEKPDDLGRGGNEES 133
BLAST of CF417320 vs. ExPASy Swiss-Prot
Match: SODC_DROBS (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila busckii GN=Sod PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.095e-26 Identity = 49/92 (53.26%), Postives = 57/92 (61.96%), Query Frame = 3 Query: 321 NVEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCMSTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQI 593 + +G V QE + P V VTGL G HGFH+HE+GD TNGCMS+G HFNP HGAP DE RH GDLGNI A +G I D +I Sbjct: 4 DAKGTVFFEQESEKCPVKVTGEVTGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPQGKEHGAPTDENRHLGDLGNITATGDGPTAVDICDCKI 95 HSP 2 Score: 40.4318 bits (93), Expect = 1.095e-26 Identity = 17/27 (62.96%), Postives = 20/27 (74.07%), Query Frame = 1 Query: 604 GPNTVVGRAFVXHELEDDLGKGGHELS 684 G N+++GR V H DDLGKGGHELS Sbjct: 99 GANSIIGRTVVVHADPDDLGKGGHELS 125 The following BLAST results are available for this feature:
BLAST of CF417320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417320 ID=CF417320; Name=CF417320; organism=Citrus sinensis; type=EST; length=689bpback to top |