CF417356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417356 vs. ExPASy Swiss-Prot
Match: SYT_RHIE6 (Threonyl-tRNA synthetase OS=Rhizobium etli (strain CIAT 652) GN=thrS PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.577e-27 Identity = 60/159 (37.74%), Postives = 96/159 (60.38%), Query Frame = 2 Query: 2 KIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSIE 478 K + ++ DA+ R++QC T Q+DF LP+RF Y + KT+ PVMIHRAI GS+ER IL+E++ G P W+SP Q +V ++ ++ Y L+V + + AG V+ D + KI K+RE + + I+V G +EA+ V++R D +M ++ Sbjct: 484 KFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIDSNSEKTQ-PVMIHRAICGSMERFLGILIENFAGHMPLWVSPLQVVVATITSEADAYGLEVAEALRDAGLNVETDFRNEKINYKIREHSVTKVPVIIVCGRKEAEERTVNIRRLGSQDQVSMGLD 641
BLAST of CF417356 vs. ExPASy Swiss-Prot
Match: SYT_PHEZH (Threonyl-tRNA synthetase OS=Phenylobacterium zucineum (strain HLK1) GN=thrS PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.577e-27 Identity = 61/146 (41.78%), Postives = 91/146 (62.33%), Query Frame = 2 Query: 2 KIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEAKSGQVSVR 439 K+D + D++ R + C T+QLD+ LP+R Y AED +K +RPVM+HRAI GS+ER +L+E+Y G +P WL+P Q +V ++ + YA + G V++D + KI KVRE LA+ I VVG EA+ G+V++R Sbjct: 466 KLDWVLKDSIGRTWTCGTIQLDYVLPERLGAEYVAEDGSK-QRPVMLHRAICGSLERFIGVLIENYAGAFPLWLAPVQVVVATITSDADDYARAAAAELKAKGLRVELDLRNEKINYKVREHSLAKVPVIAVVGRREAEEGKVALR 610
BLAST of CF417356 vs. ExPASy Swiss-Prot
Match: SYT_LACGA (Threonyl-tRNA synthetase OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=thrS PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.577e-27 Identity = 64/173 (36.99%), Postives = 105/173 (60.69%), Query Frame = 2 Query: 2 KIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQ-PYALQVRDHIYRAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSIEDLLKHFKEKLEAF 517 K+DI AL +T+QLDF LP+RF L Y +D + RPVMIHR I+G++ER A L E YKG +P WL+P QA + PV+E++ YA +VR+ + + G+ +VD + K+ K+RE+Q + + LV+G++E + V+VR + + S++D + ++++ Sbjct: 468 KLDIQTKTALGNDETMSTIQLDFMLPERFGLTYVGQD-GEEHRPVMIHRGIVGTMERFIAYLTEIYKGAFPTWLAPVQAEIIPVNEEAHGAYADKVREELAKRGFRAEVDHRNEKLGYKIRESQTQKVPYTLVLGDDEMNANGVNVRRYGTEEQISKSLDDFIAEIDADVKSY 639
BLAST of CF417356 vs. ExPASy Swiss-Prot
Match: SYT_DELAS (Threonyl-tRNA synthetase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=thrS PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.577e-27 Identity = 64/167 (38.32%), Postives = 100/167 (59.88%), Query Frame = 2 Query: 2 KIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRA----GYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSIEDLLK 490 KI+ ++ DA+ R++QC T+Q+DF +P+R + Y ED + RPVM+HRAI+GS+ER IL+E + G P WL+P QA V +++ Y +V + +A G V D + KI K+RE L + +ILV G++E +G V+VR R D MS++ ++ Sbjct: 468 KIEYTLKDAIGRQWQCGTIQVDFSMPERLDAEYVGEDGDR-HRPVMLHRAIVGSLERFIGILIEQHAGAMPTWLAPVQAAVLNITDAQADYVREVAQKLQKAFPNQGLRVATDLRNEKITYKIREHSLQKLPYILVAGDKEKAAGAVAVRARGNKDLGVMSVDAFIE 633
BLAST of CF417356 vs. ExPASy Swiss-Prot
Match: SYT_TREPS (Threonyl-tRNA synthetase OS=Treponema pallidum subsp. pallidum (strain SS14) GN=thrS PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.365e-27 Identity = 61/156 (39.10%), Postives = 95/156 (60.90%), Query Frame = 2 Query: 2 KIDISVSDALKRKFQCATLQLDFQLP--DRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHS 463 K++ ++ D L+R++QC T+Q+D+QLP +R N Y ED + PV++HR ++GS+ER IL+EHY G +P WL+P QA+V PV+ YA V + V D + ++ K+R AQ + ++L+VGE E ++ QV+VR R HS Sbjct: 417 KLEFALIDTLEREWQCGTIQVDYQLPSCERLNAEYVGEDNQR-HMPVILHRTVIGSLERFIGILIEHYGGAFPPWLAPVQAVVIPVAPAFLEYAQHVARELCARSLRVQADVSAERMNAKIRTAQTQKVPYLLIVGERELRAQQVAVRPRTGPQHS 571
BLAST of CF417356 vs. ExPASy Swiss-Prot
Match: SYT_TREPA (Threonyl-tRNA synthetase OS=Treponema pallidum GN=thrS PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.365e-27 Identity = 61/156 (39.10%), Postives = 95/156 (60.90%), Query Frame = 2 Query: 2 KIDISVSDALKRKFQCATLQLDFQLP--DRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHS 463 K++ ++ D L+R++QC T+Q+D+QLP +R N Y ED + PV++HR ++GS+ER IL+EHY G +P WL+P QA+V PV+ YA V + V D + ++ K+R AQ + ++L+VGE E ++ QV+VR R HS Sbjct: 417 KLEFALIDTLEREWQCGTIQVDYQLPSCERLNAEYVGEDNQR-HMPVILHRTVIGSLERFIGILIEHYGGAFPPWLAPVQAVVIPVAPAFLEYAQHVARELCARSLRVQADVSAERMNAKIRTAQTQKVPYLLIVGERELRAQQVAVRPRTGPQHS 571
BLAST of CF417356 vs. ExPASy Swiss-Prot
Match: SYT_STRZT (Threonyl-tRNA synthetase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=thrS PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.365e-27 Identity = 64/164 (39.02%), Postives = 103/164 (62.80%), Query Frame = 2 Query: 2 KIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVS-EKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSIEDLLK 490 K+DI + AL ++ +T+QLDF LP+RF+L Y D + RPVMIHR ++ ++ER AIL+E+YKG +P WL+P Q + PVS EK YA +V + G DVD + K+Q K+R +Q ++ + L+VG++E + V+VR Q + +S+++ ++ Sbjct: 471 KLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGAD-GEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQ 633
BLAST of CF417356 vs. ExPASy Swiss-Prot
Match: SYT_STRZP (Threonyl-tRNA synthetase OS=Streptococcus pneumoniae (strain P1031) GN=thrS PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.365e-27 Identity = 64/164 (39.02%), Postives = 103/164 (62.80%), Query Frame = 2 Query: 2 KIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVS-EKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSIEDLLK 490 K+DI + AL ++ +T+QLDF LP+RF+L Y D + RPVMIHR ++ ++ER AIL+E+YKG +P WL+P Q + PVS EK YA +V + G DVD + K+Q K+R +Q ++ + L+VG++E + V+VR Q + +S+++ ++ Sbjct: 471 KLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGAD-GEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQ 633
BLAST of CF417356 vs. ExPASy Swiss-Prot
Match: SYT_STRZJ (Threonyl-tRNA synthetase OS=Streptococcus pneumoniae (strain JJA) GN=thrS PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.365e-27 Identity = 64/164 (39.02%), Postives = 103/164 (62.80%), Query Frame = 2 Query: 2 KIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVS-EKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSIEDLLK 490 K+DI + AL ++ +T+QLDF LP+RF+L Y D + RPVMIHR ++ ++ER AIL+E+YKG +P WL+P Q + PVS EK YA +V + G DVD + K+Q K+R +Q ++ + L+VG++E + V+VR Q + +S+++ ++ Sbjct: 471 KLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGAD-GEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQ 633
BLAST of CF417356 vs. ExPASy Swiss-Prot
Match: SYT_STRR6 (Threonyl-tRNA synthetase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=thrS PE=3 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 3.365e-27 Identity = 64/164 (39.02%), Postives = 103/164 (62.80%), Query Frame = 2 Query: 2 KIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVS-EKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSIEDLLK 490 K+DI + AL ++ +T+QLDF LP+RF+L Y D + RPVMIHR ++ ++ER AIL+E+YKG +P WL+P Q + PVS EK YA +V + G DVD + K+Q K+R +Q ++ + L+VG++E + V+VR Q + +S+++ ++ Sbjct: 471 KLDIQIKTALGKEETLSTIQLDFLLPERFDLKYIGAD-GEDHRPVMIHRGVISTMERFTAILIENYKGAFPTWLAPHQVTLIPVSNEKHVDYAWEVAKKLRDRGVRADVDERNEKMQFKIRASQTSKIPYQLIVGDKEMEDETVNVRRYGQKETQTVSVDNFVQ 633 The following BLAST results are available for this feature:
BLAST of CF417356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417356 ID=CF417356; Name=CF417356; organism=Citrus sinensis; type=EST; length=662bpback to top |