CF417356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417356 vs. ExPASy Swiss-Prot
Match: SYT_CLOBJ (Threonyl-tRNA synthetase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=thrS PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.080e-33 Identity = 68/170 (40.00%), Postives = 109/170 (64.12%), Query Frame = 2 Query: 2 KIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSIEDLLKHFKEKLE 511 KID + D + R +QC T+QLDFQ+P+RF+L Y D K RPVM+HR I GSVER IL+E Y G +P WL+P Q + +++ Y +V + + V++DT + KI K+REAQL + ++L++G++E ++G+V+VR R GD +S+E+ ++ K +++ Sbjct: 463 KIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEK-HRPVMVHRTIYGSVERFIGILIEQYAGAFPTWLAPVQVKLMNITDSQYDYLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNEIK 631
BLAST of CF417356 vs. ExPASy Swiss-Prot
Match: SYT_CLOBH (Threonyl-tRNA synthetase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=thrS PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.080e-33 Identity = 68/170 (40.00%), Postives = 109/170 (64.12%), Query Frame = 2 Query: 2 KIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSIEDLLKHFKEKLE 511 KID + D + R +QC T+QLDFQ+P+RF+L Y D K RPVM+HR I GSVER IL+E Y G +P WL+P Q + +++ Y +V + + V++DT + KI K+REAQL + ++L++G++E ++G+V+VR R GD +S+E+ ++ K +++ Sbjct: 463 KIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEK-HRPVMVHRTIYGSVERFIGILIEQYAGAFPTWLAPVQVKLMNITDSQYDYLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNEIK 631
BLAST of CF417356 vs. ExPASy Swiss-Prot
Match: SYT_CLOB1 (Threonyl-tRNA synthetase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=thrS PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.080e-33 Identity = 68/170 (40.00%), Postives = 109/170 (64.12%), Query Frame = 2 Query: 2 KIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSIEDLLKHFKEKLE 511 KID + D + R +QC T+QLDFQ+P+RF+L Y D K RPVM+HR I GSVER IL+E Y G +P WL+P Q + +++ Y +V + + V++DT + KI K+REAQL + ++L++G++E ++G+V+VR R GD +S+E+ ++ K +++ Sbjct: 463 KIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEK-HRPVMVHRTIYGSVERFIGILIEQYAGAFPTWLAPVQVKLMNITDSQYDYLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNEIK 631
BLAST of CF417356 vs. ExPASy Swiss-Prot
Match: SYT_CHLTE (Threonyl-tRNA synthetase OS=Chlorobium tepidum GN=thrS PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.080e-33 Identity = 69/168 (41.07%), Postives = 108/168 (64.29%), Query Frame = 2 Query: 2 KIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSIEDLLKHFKEK 505 KID V DA+ RK+Q T+Q+D+ +P+RF+L Y D K RPV+IHRA GS+ER +L+EH G +P WL+P QA+V P++E+ YA +V ++ AG ++D KI KK+REA+L++ +LV+G E + G+VS+R +GD + +++L+ E+ Sbjct: 486 KIDFIVRDAIGRKWQLGTVQVDYVMPERFDLSYIGSDGQK-HRPVVIHRAPFGSMERFIGVLIEHTAGNFPLWLAPVQAVVLPIAEEVHDYAREVYAKLHEAGIRTELDLRSEKIGKKIREAELSKIPAMLVIGRNEQEKGEVSLRRHRKGDEGSFGVDELIARLCEE 652
BLAST of CF417356 vs. ExPASy Swiss-Prot
Match: SYT_CHLL2 (Threonyl-tRNA synthetase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=thrS PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.080e-33 Identity = 68/169 (40.24%), Postives = 110/169 (65.09%), Query Frame = 2 Query: 2 KIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSIEDLLKHFKEKL 508 KID V DAL RK+Q T+Q+D+ +P+RF+L Y D K RPV+IHRA GS+ER +L+EH G +P WL+P QA+V P++E+ YA + + AG V++DT + KI +K+REA++ + +++VG++E SG++S+R GD + ++ L+ K+++ Sbjct: 486 KIDFIVRDALGRKWQLGTVQVDYVMPERFDLSYIGSDGQK-HRPVVIHRAPFGSMERFIGVLIEHTAGNFPLWLAPVQAVVLPIAEEVHDYAKTIHTALLAAGIRVEIDTRNEKIGRKIREAEIGKIPCMIIVGQKERDSGEISLRRHRSGDMGSFTVPGLIDILKKEI 653
BLAST of CF417356 vs. ExPASy Swiss-Prot
Match: SYT_CLOBM (Threonyl-tRNA synthetase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=thrS PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.411e-33 Identity = 68/170 (40.00%), Postives = 109/170 (64.12%), Query Frame = 2 Query: 2 KIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSIEDLLKHFKEKLE 511 KID + D + R +QC T+QLDFQ+P+RF+L Y D K RPVM+HR I GSVER IL+E Y G +P WL+P Q + +++ Y +V + + V++DT + KI K+REAQL + ++L++G++E ++G+V+VR R GD +S+E+ ++ K +++ Sbjct: 463 KIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEK-HRPVMVHRTIYGSVERFIGILIEQYAGAFPTWLAPVQVKLMNITDAQYDYLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQKIPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNEIK 631
BLAST of CF417356 vs. ExPASy Swiss-Prot
Match: SYT_CLOB6 (Threonyl-tRNA synthetase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=thrS PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.411e-33 Identity = 68/170 (40.00%), Postives = 109/170 (64.12%), Query Frame = 2 Query: 2 KIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSIEDLLKHFKEKLE 511 KID + D + R +QC T+QLDFQ+P+RF+L Y D K RPVM+HR I GSVER IL+E Y G +P WL+P Q + +++ Y +V + + V++DT + KI K+REAQL + ++L++G++E ++G+V+VR R GD +S+E+ ++ K +++ Sbjct: 463 KIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYIGADGEK-HRPVMVHRTIYGSVERFIGILIEQYAGAFPTWLAPVQVKLMNITDAQYDYLKKVEEALKENNIRVEIDTRNEKIGYKIREAQLQKVPYMLILGDKEVEAGKVAVRSRKDGDLGAISLEEFIEKIKNEIK 631
BLAST of CF417356 vs. ExPASy Swiss-Prot
Match: SYT_THEFY (Threonyl-tRNA synthetase OS=Thermobifida fusca (strain YX) GN=thrS PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.842e-33 Identity = 71/172 (41.28%), Postives = 108/172 (62.79%), Query Frame = 2 Query: 2 KIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNM----SIEDLLKHFKEK 505 KI + DA+ R +Q +T+Q+DFQ P RF L Y A D ++ +RPVMIHRA+ GS+ER FA+LLEHY G +P WL+P Q + P++ + PY V + G V+VD +D ++QKK+R AQ + F+L+ G+ + G VS R RD ++ + +IE++L +E+ Sbjct: 486 KISVQAKDAIGRTWQMSTIQVDFQQPKRFELEYQAADGSR-QRPVMIHRALFGSIERFFAVLLEHYAGAFPAWLAPVQVVGIPIASEHVPYLEDVARRLREHGVRVEVDASDDRMQKKIRNAQKQKIPFMLLAGDNDVSKGAVSFRYRDGSQNNGVPIDKAIEEILTVIRER 656
BLAST of CF417356 vs. ExPASy Swiss-Prot
Match: SYT_PARD8 (Threonyl-tRNA synthetase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=thrS PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.842e-33 Identity = 69/158 (43.67%), Postives = 103/158 (65.19%), Query Frame = 2 Query: 2 KIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSI 475 K+D V DA+ R++Q T+Q+D+ LP+RF L Y+ D K RPVMIHRA GS+ER A+L+EH GK+P WL+P Q + P+SEK YA Q+ + VD + KI +K+R+ +L + ++L+VGE+EA++ +VSVR + +GD +M I Sbjct: 472 KLDFMVKDAIGRRWQLGTIQVDYNLPERFQLEYTGADNQK-HRPVMIHRAPFGSMERFVAVLIEHTAGKFPLWLTPEQVCIMPISEKFNDYAWQIARELGNQEIRAIVDDRNEKIGRKIRDNELKRIPYMLIVGEKEAENSEVSVRKQGEGDKGSMKI 628
BLAST of CF417356 vs. ExPASy Swiss-Prot
Match: SYT_FRASN (Threonyl-tRNA synthetase OS=Frankia sp. (strain EAN1pec) GN=thrS PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.842e-33 Identity = 68/170 (40.00%), Postives = 108/170 (63.53%), Query Frame = 2 Query: 2 KIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALQVRDHIYRAGYYVDVDTTDRKIQKKVREAQLAQYNFILVVGEEEAKSGQVSVRVRDQGDHSNMSIEDLLKHFKEKLE 511 KI + DA+ R +Q +T+Q+DFQLP RF++ Y A D + +RP MIHRA+ G++ER FAILLEHY G P WL+P Q + P++++ PY V + + G V+VD++D ++QKK+R AQ + F+L+ G+E+ G VS R RD + + +++ + + +E Sbjct: 485 KISVQARDAIGRTWQLSTIQVDFQLPQRFDMTYQAADGTR-QRPFMIHRALFGTIERFFAILLEHYAGALPPWLAPVQVVGIPITDEHVPYLTDVAAKLRQRGIRVEVDSSDDRMQKKIRTAQKQKVPFMLLAGDEDVAKGAVSFRFRDGTQRNGVPVDEAVAEILDAVE 653 The following BLAST results are available for this feature:
BLAST of CF417356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417356 ID=CF417356; Name=CF417356; organism=Citrus sinensis; type=EST; length=662bpback to top |