CF417371
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417371 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 2.661e-48 Identity = 90/125 (72.00%), Postives = 102/125 (81.60%), Query Frame = 2 Query: 128 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAF 502 KDY +PPPAP + EL WSFYRA IAEF+AT LFLY++V TV+G K+ + C VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV Y+V QCLGAICG G+VK F Sbjct: 29 KDYKEPPPAPFFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGF 153
BLAST of CF417371 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 2.661e-48 Identity = 88/127 (69.29%), Postives = 104/127 (81.89%), Query Frame = 2 Query: 128 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMK 508 KDY +PPPAPL + ELK WSFYRA IAEFVAT LFLY+++ TV+G K + C VG+ GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGA+CG G+VK F + Sbjct: 32 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQQ 158
BLAST of CF417371 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 3.475e-48 Identity = 90/125 (72.00%), Postives = 103/125 (82.40%), Query Frame = 2 Query: 128 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAF 502 KDY +PPPAPL + EL WSF+RA IAEF+AT LFLY++V TV+G K+ + C VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV Y+V QCLGAICG G+VK F Sbjct: 29 KDYKEPPPAPLFEPGELASWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGF 153
BLAST of CF417371 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 4.539e-48 Identity = 91/128 (71.09%), Postives = 104/128 (81.25%), Query Frame = 2 Query: 134 YVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQS---DACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMK 508 Y DPPPAPL+D +EL WS YRALIAEF+ATL+FLYVS+ATVIG+K Q DAC GVG LG+AW+FG IFVLVYCT G+SGGHINPAVT GLF RK+SL+R V Y+VAQCLGAI G G+VK MK Sbjct: 23 YWDPPPAPLLDTSELGKWSLYRALIAEFMATLIFLYVSIATVIGYKNQRATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMK 150
BLAST of CF417371 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2) HSP 1 Score: 188.348 bits (477), Expect = 1.725e-47 Identity = 90/125 (72.00%), Postives = 103/125 (82.40%), Query Frame = 2 Query: 128 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAF 502 KDY +PPPAPL + +EL WSFYRA IAEF+AT LFLY++V TV+G ++S C VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV Q LGAICG G+VK F Sbjct: 32 KDYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGF 156
BLAST of CF417371 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2) HSP 1 Score: 188.348 bits (477), Expect = 1.725e-47 Identity = 89/127 (70.08%), Postives = 102/127 (80.31%), Query Frame = 2 Query: 128 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMK 508 KDY +PP AP+ ++ EL WSFYRA IAEFVAT LFLY+S+ TV+G K + C VG+ GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM QCLGAICG G+VK F + Sbjct: 31 KDYREPPAAPVFEVEELTSWSFYRAGIAEFVATFLFLYISILTVMGVNKSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQR 157
BLAST of CF417371 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 1.725e-47 Identity = 88/125 (70.40%), Postives = 102/125 (81.60%), Query Frame = 2 Query: 128 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAF 502 KDY +PPPAP + EL WSF+RA IAEF+AT LFLY++V TV+G K+ + C VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAICG G+VK F Sbjct: 29 KDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGF 153
BLAST of CF417371 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 1.725e-47 Identity = 88/125 (70.40%), Postives = 102/125 (81.60%), Query Frame = 2 Query: 128 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAF 502 KDY +PPPAP + EL WSF+RA IAEF+AT LFLY++V TV+G K+ + C VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAICG G+VK F Sbjct: 29 KDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGF 153
BLAST of CF417371 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 2.108e-45 Identity = 88/127 (69.29%), Postives = 101/127 (79.53%), Query Frame = 2 Query: 128 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMK 508 KDY +PPPAPL + ELK WSFYR IAEFVAT LFLY+S+ TV+G K + C VG+ GIAW+FGGMI LVYCTAGIS GHINPAVTFGLFLARK+SL RAV Y++ QCLGAICG G+VK F + Sbjct: 31 KDYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFLYISILTVMGVSKSTSKCATVGIQGIAWSFGGMILALVYCTAGIS-GHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQ 156
BLAST of CF417371 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 2.754e-45 Identity = 87/124 (70.16%), Postives = 101/124 (81.45%), Query Frame = 2 Query: 128 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKA 499 KDY DPPPAPL+D EL WS YRA IAEF ATLL + +SV+TVIG K+QS GG G+LGIAWAFGG+IFVLVYCTAGISGGH+NPAVTF + LAR+VSL RA Y +AQC+GA+CG GL +A Sbjct: 12 KDYQDPPPAPLVDTGELGKWSLYRAAIAEFTATLLLVCISVSTVIGEKRQSGE-GGAGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARA 134 The following BLAST results are available for this feature:
BLAST of CF417371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417371 ID=CF417371; Name=CF417371; organism=Citrus sinensis; type=EST; length=516bpback to top |