CF417373

Overview
NameCF417373
Unique NameCF417373
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length561
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF417373 vs. ExPASy Swiss-Prot
Match: GRXS8_ARATH (Monothiol glutaredoxin-S8 OS=Arabidopsis thaliana GN=GRXS8 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.488e-11
Identity = 36/88 (40.91%), Postives = 51/88 (57.95%), Query Frame = 1 
Query:   37 LPKAQETVSSNSVVVFSKTLCPFCVSVKELFQQLGVTFKAIELDKESDGSDIQSALAEWTGQKTVPNVFIGGKHIGGCDSTTALHRER 300
            + K Q+ +S  SVV+FS   C    ++K LF  LGV     ELD+ + G +I+ ALA+     TVP VFIGG+ +GG +   +LH  R
Sbjct:    1 MEKIQKMISEKSVVIFSNNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEYALAQLGCSPTVPVVFIGGQLVGGANQVMSLHLNR 88
The following BLAST results are available for this feature:
BLAST of CF417373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
GRXS8_ARATH5.488e-1140.91Monothiol glutaredoxin-S8 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-303 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417373 ID=CF417373; Name=CF417373; organism=Citrus sinensis; type=EST; length=561bp
TTTCGAATCAAAGACAAAGAAGACACAGAAATGGCTTTGCCCAAGGCCCA
GGAAACCGTTTCCTCCAATTCCGTCGTCGTTTTCAGCAAAACGCTTTGTC
CGTTCTGCGTGAGTGTCAAAGAGCTGTTTCAGCAACTCGGAGTCACTTTC
AAGGCCATTGAACTGGACAAAGAAAGTGATGGAAGTGACATTCAATCAGC
TCTAGCTGAGTGGACTGGACAGAAAACTGTTCCAAATGTCTTCATCGGAG
GGAAACACATTGGTGGCTGCGATTCAACTACTGCACTGCACAGGGAAAGG
GAAGCTGGTTCCTCTGCTCACTGAAGCTGGAGCTGTTGCCAAGACAGCTG
CCTAAGGGATGGCTATTCTCTGCCTGTTTATGCTAGTAATAAATAAACAA
TGTGTTGGTAGTGCTTAATCTGTCTGAATTAAATATGAAATTATGCTTAT
TTGAGTAATTTCCAATGCACTTTTTTGTTCAGTTTCTGTTTTATGTTGAA
ATCTGTATGAATTTTATCAGATTTTCCATCTACTATATCCATGTAGAGTC
ATTTCTGCTGT
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