CF417375

Overview
NameCF417375
Unique NameCF417375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.006e-37
Identity = 88/199 (44.22%), Postives = 117/199 (58.79%), Query Frame = 3
Query:   12 DACAPMLCAGISVYSPLRSHGLDK-PXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGPDK-LELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDVGNT 602
            +  AP+LCAG++VYSPL   GL +                  VK AKAMG  VTVIS+S  KK++AI+ LGAD +L S D  +MQ A  +LD IIDTV  FH               +++G  +  L+   P ++ G KA+ G F+G MKET++ML+F  E  IT+ IE + +D  NTA ERLEK DVRYRFV+DV  +
Sbjct:  156 EQAAPLLCAGVTVYSPLTHFGLKEISGLRGGILGLGGVGHMGVKLAKAMGHHVTVISSSDKKKEEAIDHLGADAYLVSSDATQMQEAADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFISPMVMLGRKAITGSFIGSMKETEEMLDFCNEKGITSTIEVVKMDYINTAFERLEKNDVRYRFVVDVAGS 354          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.313e-37
Identity = 85/195 (43.59%), Postives = 116/195 (59.49%), Query Frame = 3
Query:   12 DACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGPDK-LELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDV 593
            +  AP+LCAGI+VYSPL   G  +                 VK AKAMG  VTVIS+S  K+++A+E LGAD +L S D D+MQ A  +LD IIDTV   H               +++G  +  L+   P ++ G K++ G F+G MKET++ML+F  E  +T+ IE + +D  NTA+ERLEK DVRYRFV+DV
Sbjct:  156 EQAAPLLCAGITVYSPLNHFGFKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQEASDSLDYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFISPMVMLGRKSITGSFIGSMKETEEMLDFCKEKGVTSQIEIVKMDYINTAMERLEKNDVRYRFVVDV 350          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.926e-37
Identity = 85/201 (42.29%), Postives = 115/201 (57.21%), Query Frame = 3
Query:    3 LPLDACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGPDK-LELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDVGNT 602
            + ++  AP+LCAG++VYSPL   GL                   VK AKAMG  VTVIS+S  KK++AIE LGAD ++ S DP EMQ    +LD IIDTV  FH               +++G  +  L+   P ++ G K + G F+G +KET+++L F  E  +T+ IET+ ID  N A ERL K DVRYRFV+DV  +
Sbjct:  154 MAVEQAAPLLCAGVTVYSPLSHFGLMASGLKGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVSSDPAEMQRLADSLDYIIDTVPVFHPLDPYLACLKLDGKLILMGVINTPLQFVTPLVILGRKVISGSFIGSIKETEEVLAFCKEKGLTSTIETVKIDELNIAFERLRKNDVRYRFVVDVAGS 354          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.926e-37
Identity = 83/198 (41.92%), Postives = 116/198 (58.59%), Query Frame = 3
Query:   12 DACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGPDK-LELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDVGNT 602
            +  AP+LCAGI+VYSP    G ++                 VK AKAMG  VTVIS+S  K+++A+E LGAD +L S D D+MQ A  +LD IIDTV   H               +++G  +  L+   P ++ G K++ G F+G MKET++ML+F  E  +T+ IE + +D  NTA+ERLEK DV YRFV+DV  +
Sbjct:  156 EQAAPLLCAGITVYSPFNHFGFNQSGFRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQEAADSLDYIIDTVPVGHPLELYLSLLKIDGKLILIGVINTPLQFISPMVMLGRKSITGSFIGSMKETEEMLDFCKEKGVTSQIEIVKMDYINTAMERLEKNDVSYRFVVDVAGS 353          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 4.991e-37
Identity = 84/198 (42.42%), Postives = 114/198 (57.58%), Query Frame = 3
Query:   12 DACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGPDK-LELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDVGNT 602
            +  AP+LCAG++VYSPL+  GL +                 VK AKAMG  VTVIS+S  K+++A+E LGAD +L S D + MQ A   LD IIDTV   H               +++G  +  L+   P ++ G K++ G F+G MKET++ML F  E  + + IE I +D  NTA ERLEK DVRYRFV+DV  +
Sbjct:  156 EQAAPLLCAGLTVYSPLKHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEAMEHLGADEYLVSSDVESMQKAADQLDYIIDTVPVVHPLEPYLSLLKLDGKLILMGVINAPLQFVTPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGVASMIEVIKMDYINTAFERLEKNDVRYRFVVDVAGS 353          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.235e-36
Identity = 83/198 (41.92%), Postives = 113/198 (57.07%), Query Frame = 3
Query:    3 LPLDACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGPDK-LELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDV 593
            L  +  AP++CAG++VYSPL   GL +                 VK AKAMG  VTVIS+S  K+ +A+E LGAD +L S D + M+ A  +LD I DT+   H               ++ G  +  L+   P ++ G K++ G F+G MKET++ML F  E  +T+ IE I +D  NTALERLEK DVRYRFV+DV
Sbjct:  153 LESEQAAPLMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDV 350          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: CADH2_EUCGU (Probable cinnamyl alcohol dehydrogenase 2 OS=Eucalyptus gunnii GN=CAD2 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.235e-36
Identity = 83/198 (41.92%), Postives = 113/198 (57.07%), Query Frame = 3
Query:    3 LPLDACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGPDK-LELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDV 593
            L  +  AP++CAG++VYSPL   GL +                 VK AKAMG  VTVIS+S  K+ +A+E LGAD +L S D + M+ A  +LD I DT+   H               ++ G  +  L+   P ++ G K++ G F+G MKET++ML F  E  +T+ IE I +D  NTALERLEK DVRYRFV+DV
Sbjct:  153 LESEQAAPLMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDV 350          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.225e-36
Identity = 82/198 (41.41%), Postives = 113/198 (57.07%), Query Frame = 3
Query:   12 DACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGPDK-LELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDVGNT 602
            +  AP+LCAG++VYSPL   GL +                 VK AKAMG  VTVIS+S  K+ +A++ LGAD +L S D   MQ A  +LD IIDTV  FH               +++G  +  L+   P ++ G K++ G F+G MKE  +ML F  E ++++ IE + +D  NTA ERLEK DVRYRFV+DV  +
Sbjct:  156 EQAAPLLCAGVTVYSPLNHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRAEALDHLGADDYLVSSDAARMQEAADSLDYIIDTVPVFHPLEPYLSLLKIDGKLILMGVVNTPLQFVSPMVMLGRKSITGSFIGSMKELAEMLEFCKEKDLSSTIEIVKMDYINTAFERLEKNDVRYRFVVDVAGS 353          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.207e-36
Identity = 85/192 (44.27%), Postives = 112/192 (58.33%), Query Frame = 3
Query:   21 APMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGPD-KLELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDV 593
            AP+LCAG++VYSPL   GL  P                VK AKA+G  VTVIS+S  KKK+A+E LGAD +L S D   MQ A  +LD IIDTV   H               +++G  +  L+   P ++ G K++ G FVG +KET++ML F  E  +T+ IE +++D  N A ERLEK DVRYRFV+DV
Sbjct:  160 APLLCAGVTVYSPLSHFGLKTPGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSDKKKKEALEDLGADNYLVSSDTVGMQEAADSLDYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFVTPMVMLGRKSITGSFVGSVKETEEMLEFWKEKGLTSMIEIVTMDYINKAFERLEKNDVRYRFVVDV 351          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.097e-35
Identity = 79/198 (39.90%), Postives = 113/198 (57.07%), Query Frame = 3
Query:    3 LPLDACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGG-PDKLELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDV 593
            + ++  AP+LCAG++VYSPL   GL +P                VK AKAMG  VTVIS+S  K+++A++ LGAD ++   D  +M     +LD +IDTV   H               +++G   + L+   P L+ G K + G F+G MKET++ML F  E  +++ IE + +D  NTA ERLEK DVRYRFV+DV
Sbjct:  153 MAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMKETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRYRFVVDV 350          
The following BLAST results are available for this feature:
BLAST of CF417375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
CADH1_ARACO1.006e-3744.22Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]
CADH1_TOBAC1.313e-3743.59Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]
CADH4_ARATH2.926e-3742.29Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
CADH2_TOBAC2.926e-3741.92Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH_POPDE4.991e-3742.42Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
CADH_EUCGL3.235e-3641.92Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH2_EUCGU3.235e-3641.92Probable cinnamyl alcohol dehydrogenase 2 OS=Eucal... [more]
CADH1_OCIBA4.225e-3641.41Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH_MEDSA7.207e-3644.27Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH5_ARATH2.097e-3539.90Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-305 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417375 ID=CF417375; Name=CF417375; organism=Citrus sinensis; type=EST; length=684bp
GCCTTCCTCTTGATGCCTGTGCCCCAATGCTTTGTGCTGGTATCTCAGTT
TACAGCCCTTTGAGATCACATGGACTTGACAAACCAGGTATGCATGTCGG
TGTAGTTGGCCTGGGTGGATTAGGCCATATGGCTGTCAAGTTTGCTAAAG
CAATGGGGGTTAAGGTAACAGTCATTAGTACCTCCCCTAGTAAGAAGAAG
GATGCCATTGAACGTCTCGGTGCTGACACATTTCTGTTTAGTCATGATCC
GGATGAGATGCAGTCTGCCGTGAGCACCTTGGACGGTATCATTGACACAG
TAACCGGCTTTCACCCTCTATTGCCATTACTTGGACTATTGAAATATAAT
GGCAAGCTTGTTATTGTCGGTGGACCAGATAAGCTAGAGCTACCGGTTCC
TCCTCTACTCTTTGGGGCAAAGGCTGTTGTTGGCTGTTTCGTTGGGGGCA
TGAAGGAGACTCAAGACATGCTCAATTTTGCAGCCGAACACAACATAACG
GCAGACATCGAGACTATATCAATCGATAATGCGAACACTGCCCTGGAGCG
TCTTGAGAAAGGCGATGTCAGATATCGATTTGTCATCGACGTTGGGAACA
CACTGAAGTCTANCTCTTAGATATTTGGCTGGATCGGCTATACTATATGA
TGAAATGTTGAGTCATATATAATTAGTATCCTAT
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