CF417375

Overview
NameCF417375
Unique NameCF417375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: YL498_MIMIV (Probable zinc-type alcohol dehydrogenase-like protein L498 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L498 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.510e-17
Identity = 64/207 (30.92%), Postives = 96/207 (46.38%), Query Frame = 3
Query:    3 LPLDACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGPDKLELPVPPLLFGAK-AVVGCF-----VGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDVGNTL 605
            L ++ CAP++CAG + YSPLR   +  P               AVK AKAMG  V  I+ +  K KD++  LGA+  + S +  +M     + D I+ T+   H                 VG     EL  P ++ G   A   CF     + G  E ++ML F +EHNI  D++ I  D  N   ++L +   +YR+VID+  +L
Sbjct:  221 LDIERCAPLMCAGATTYSPLRQAKVG-PGMKVGIVGIGGLGHIAVKIAKAMGAHVVAITRTEWKFKDSVNNLGANESILSTNVWQMNQHKGSFDFILSTIPMAHDIVPYIELLKYKATICTVG-----EL-FPTVINGMDLAQHPCFLQSSLIAGSDEIKEMLAFCSEHNIMPDVQIIKADKINDTRQKLLESKAKYRYVIDIRASL 420          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: YJGB_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjgB OS=Escherichia coli (strain K12) GN=yjgB PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.256e-13
Identity = 51/196 (26.02%), Postives = 87/196 (44.39%), Query Frame = 3
Query:    3 LPLDACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGP-DKLELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVI 587
            + +++  P+LC GI+V+ PL  H +                  A+K   AMG +VT  S++P+K+++ +  +GAD  + S DP  +++     D II+TV                     VG     L +P   L+ G ++V G   G   E + ++ FAA   +    E   +   N A++ +  G  RYR V+
Sbjct:  142 IDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHI-AIKLLHAMGCEVTAFSSNPAKEQEVLA-MGADKVVNSRDPQALKALAGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVL 335          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: ADHA_RHIME (Alcohol dehydrogenase OS=Rhizobium meliloti GN=adhA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.256e-13
Identity = 59/201 (29.35%), Postives = 88/201 (43.78%), Query Frame = 3
Query:    3 LPLDACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPD---EMQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVG-GPDKLELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDV 593
            L     AP+LCAG++VY  L+   + +P               AV++AKAMG+ V      P K   A E+LGAD  + +  PD   E+Q     L G + T                     +VG  P ++ LPV   +     V G  VG  ++ ++ L FA E  + A      I+N N   ER+E+G +  R V+D+
Sbjct:  140 LEFGPAAPVLCAGVTVYKGLKETEV-RPGEWVLVSGIGGLGHMAVQYAKAMGMHVAAADIFPDKLALA-EKLGADLVVDARAPDAVEEVQRRTGGLHGALVTAVSPKAMEQAYSMLRSKGTMALVGLPPGQICLPVFDTVLKRITVRGSIVGTRQDLEEALEFAGEGKVAAHFSWDKIENINAIFERMEEGKIDGRIVLDL 338          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: ADH2_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adh PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.256e-13
Identity = 54/193 (27.98%), Postives = 87/193 (45.08%), Query Frame = 3
Query:   21 APMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGI---IDTVTGFHXXXXXXXXXXXXXXXVIVGGPDK-LELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVI 587
            AP+LCAG++ Y  L+  G  +P               A+++AKAMG+ V  +  S  K K A + LGAD  +     D +++    + G+   I                      V+VG P+  L +P+   +    +V G  VG  K+ Q+ L+FAA   +   +ET  ++  N   ER+EKG +  R V+
Sbjct:  144 APILCAGVTTYKALKVSGA-RPGEWVAIYGIGGLGHIALQYAKAMGLNVVAVDISDEKSKLAKD-LGADIAINGLKEDPVKAIHDQVGGVHAAISVAVNKKAFEQAYQSVKRGGTLVVVGLPNADLPIPIFDTVLNGVSVKGSIVGTRKDMQEALDFAARGKVRPIVETAELEEINEVFERMEKGKINGRIVL 334          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: ADH1_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adhT PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.848e-13
Identity = 57/203 (28.08%), Postives = 91/203 (44.83%), Query Frame = 3
Query:    3 LPLDACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVSTLDGI---IDTVTGFHXXXXXXXXXXXXXXXVIVGGPDKLELPVP---PLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDV 593
            L  +  AP+ CAG++ Y  L+  G  KP               AV++AKAMG+ V  +     +K +  ++LGAD  +     D  Q     + G+   + T                    V+VG P + E+P+P    +L G K ++G  VG  K+ Q+ L FAAE  +   +E   ++N N   +R+ KG +  R V+ V
Sbjct:  138 LSFEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDLG-DEKLELAKQLGADLVVNPKHDDAAQWIKEKVGGVHATVVTAVSKAAFESAYKSIRRGGACVLVGLPPE-EIPIPIFDTVLNGVK-IIGSIVGTRKDLQEALQFAAEGKVKTIVEVQPLENINDVFDRMLKGQINGRVVLKV 336          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: ADH6_YEAST (NADP-dependent alcohol dehydrogenase 6 OS=Saccharomyces cerevisiae GN=ADH6 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.462e-12
Identity = 58/201 (28.86%), Postives = 94/201 (46.77%), Query Frame = 3
Query:    3 LPLDACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFS-HDPDEMQSAVSTLDGIIDTVTGFH--XXXXXXXXXXXXXXXVIVGGPDKLE-LPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNA--NTALERLEKGDVRYRFVI 587
            +P    AP+LC G++VYSPL  +G   P                   +KAMG +  VIS S  K++DA+ ++GAD ++ +  + D  +    T D I+   +                    V +  P++ E L + P    A ++    +G +KE   +L   +E +I   +ET+ +  A  + A ER+EKGDVRYRF +
Sbjct:  153 IPSHLAAPLLCGGLTVYSPLVRNGCG-PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDIKIWVETLPVGEAGVHEAFERMEKGDVRYRFTL 351          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: ADH2_YEAST (Alcohol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=ADH2 PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 7.257e-12
Identity = 54/197 (27.41%), Postives = 91/197 (46.19%), Query Frame = 3
Query:   21 APMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFL-FSHDPDEMQSAVSTLDG----IIDTVTGFHXXXXXXXXXXXXXXXVIVGGPD--KLELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVID 590
            AP+LCAGI+VY  L+S  L                  AV++AKAMG +V  I   P K+ +    LG + F+ F+ + D + + V   +G    II+                     V+VG P   K    V   +  + ++VG +VG   +T++ L+F A   + + I+ + + +     E++EKG +  R+V+D
Sbjct:  150 APILCAGITVYKALKSANLRAGHWAAISGAAGGLGSLAVQYAKAMGYRVLGIDGGPGKE-ELFTSLGGEVFIDFTKEKDIVSAVVKATNGGAHGIINVSVSEAAIEASTRYCRANGTVVLVGLPAGAKCSSDVFNHVVKSISIVGSYVGNRADTREALDFFARGLVKSPIKVVGLSSLPEIYEKMEKGQIAGRYVVD 345          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: ADH3_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 58/201 (28.86%), Postives = 88/201 (43.78%), Query Frame = 3
Query:    3 LPLDACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAKAMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDE---MQSAVSTLDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGPDKLELPVP---PLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVI 587
            L  +  AP+ CAG++ Y  L+  G  KP               AV++AKAMG+ V  +     K + A E LGAD  +     D    M+  V  +   + T                    V+VG P + E+P+P    +L G K ++G  VG  K+ Q+ L FAAE  +   IE   ++  N   +R+ KG +  R V+
Sbjct:  138 LSFEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE-LGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE-EMPIPIFDTVLNGIK-IIGSIVGTRKDLQEALQFAAEGKVKTIIEVQPLEKINEVFDRMLKGQINGRVVL 334          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: ADH_STAES (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=adh PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 54/203 (26.60%), Postives = 88/203 (43.35%), Query Frame = 3
Query:   15 ACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAK-AMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVST-----LDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGP-DKLELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVIDVGNT 602
            A + + CAG++ Y  ++  G++ P               A+++AK  MG KV     +  K   A E LGAD  + S + D ++          LD  + T                    V VG P DK++L +P L+     VVG  VG  ++ ++   FAAE+ +   I+   +   N   + +EKG +  R VID+ +T
Sbjct:  139 AASSITCAGVTTYKAVKVSGIE-PGQWLGVFGVGGLGNLALQYAKNVMGAKVVAFDINDDKLNFAKE-LGADAIINSTNVDPIEEVNRLTNNKGLDATVITAVAKTPFNQAVDVVKAGARVVAVGLPVDKMDLDIPRLVLDGIEVVGSLVGTRQDLREAFQFAAENKVIPKIQLRQLSEINDIFDEMEKGTITGRMVIDMKST 339          
BLAST of CF417375 vs. ExPASy Swiss-Prot
Match: ADH_STAAN (Alcohol dehydrogenase OS=Staphylococcus aureus (strain N315) GN=adh PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.024e-11
Identity = 53/198 (26.77%), Postives = 84/198 (42.42%), Query Frame = 3
Query:   15 ACAPMLCAGISVYSPLRSHGLDKPXXXXXXXXXXXXXXXAVKFAK-AMGVKVTVISTSPSKKKDAIERLGADTFLFSHDPDEMQSAVST-----LDGIIDTVTGFHXXXXXXXXXXXXXXXVIVGGP-DKLELPVPPLLFGAKAVVGCFVGGMKETQDMLNFAAEHNITADIETISIDNANTALERLEKGDVRYRFVI 587
            A + + CAG++ Y  ++   + KP               A+++AK  MG K+     +  K   A E LGAD  + S D D +   +       LD  + T                    V VG P DK+ L +P L+     VVG  VG  ++ ++   FAAE+ +T  ++   ++  N   E +EKG +  R VI
Sbjct:  139 AASSITCAGVTTYKAVKVSNV-KPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKE-LGADAIINSKDVDPVAEVMKLTDNKGLDATVVTSVAKTPFNQAVDVVKAGARVVAVGLPVDKMNLDIPRLVLDGIEVVGSLVGTRQDLREAFEFAAENKVTPKVQLRKLEEINDIFEEMEKGTITGRMVI 334          
The following BLAST results are available for this feature:
BLAST of CF417375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
YL498_MIMIV1.510e-1730.92Probable zinc-type alcohol dehydrogenase-like prot... [more]
YJGB_ECOLI2.256e-1326.02Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADHA_RHIME2.256e-1329.35Alcohol dehydrogenase OS=Rhizobium meliloti GN=adh... [more]
ADH2_BACST2.256e-1327.98Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH1_BACST3.848e-1328.08Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH6_YEAST1.462e-1228.86NADP-dependent alcohol dehydrogenase 6 OS=Saccharo... [more]
ADH2_YEAST7.257e-1227.41Alcohol dehydrogenase 2 OS=Saccharomyces cerevisia... [more]
ADH3_BACST9.479e-1228.86Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH_STAES3.602e-1126.60Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]
ADH_STAAN8.024e-1126.77Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-305 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417375 ID=CF417375; Name=CF417375; organism=Citrus sinensis; type=EST; length=684bp
GCCTTCCTCTTGATGCCTGTGCCCCAATGCTTTGTGCTGGTATCTCAGTT
TACAGCCCTTTGAGATCACATGGACTTGACAAACCAGGTATGCATGTCGG
TGTAGTTGGCCTGGGTGGATTAGGCCATATGGCTGTCAAGTTTGCTAAAG
CAATGGGGGTTAAGGTAACAGTCATTAGTACCTCCCCTAGTAAGAAGAAG
GATGCCATTGAACGTCTCGGTGCTGACACATTTCTGTTTAGTCATGATCC
GGATGAGATGCAGTCTGCCGTGAGCACCTTGGACGGTATCATTGACACAG
TAACCGGCTTTCACCCTCTATTGCCATTACTTGGACTATTGAAATATAAT
GGCAAGCTTGTTATTGTCGGTGGACCAGATAAGCTAGAGCTACCGGTTCC
TCCTCTACTCTTTGGGGCAAAGGCTGTTGTTGGCTGTTTCGTTGGGGGCA
TGAAGGAGACTCAAGACATGCTCAATTTTGCAGCCGAACACAACATAACG
GCAGACATCGAGACTATATCAATCGATAATGCGAACACTGCCCTGGAGCG
TCTTGAGAAAGGCGATGTCAGATATCGATTTGTCATCGACGTTGGGAACA
CACTGAAGTCTANCTCTTAGATATTTGGCTGGATCGGCTATACTATATGA
TGAAATGTTGAGTCATATATAATTAGTATCCTAT
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