CF417381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA6_YEAST (Proteasome component C7-alpha OS=Saccharomyces cerevisiae GN=SCL1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.041e-14 Identity = 48/140 (34.29%), Postives = 72/140 (51.43%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAG-SAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTPVWRSPPLWCFISFCRVGQKL 420 YD TIFSPEGRLYQVEYA +A +++ + KD V++ +KKV KLL T+ ++ I + V G + DA A+ +A + Y Y MP + L + + + Q YT PL ++F V ++L Sbjct: 12 YDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLD-PTTVSYIFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQRAYMRPLGVILTFVSVDEEL 150
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA1_YEAST (Proteasome component PRE5 OS=Saccharomyces cerevisiae GN=PRE5 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.665e-14 Identity = 45/125 (36.00%), Postives = 65/125 (52.00%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTPVWRSPP 378 YD T FSP GRL+QVEYA+EAI +G+ S VLV K+ +L S+ +K+ K D+H+ ++AG+ DA +L N R Q + + + VE+ LCD Q T + P Sbjct: 6 YDGDTVTFSPTGRLFQVEYALEAIKQGSVTVGLRSNTHAVLVALKRNADEL---SSYQKKIIKCDEHMGLSLAGLAPDARVLSNYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQKNTQSYGGRP 127
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBB (Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.323e-13 Identity = 48/150 (32.00%), Postives = 73/150 (48.67%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAG-SAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTPVWRSPPLWCFISFCRVGQK----LWLPTLH 438 +D T+FSPEG LYQVEYA +A+ AG + I KD V++ + V KL++ T T +Y ++D+ + G D L+ AR +A Y Y Y PM V L + D Q T + ++F + Q W+P ++ Sbjct: 6 FDKYITVFSPEGSLYQVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKLMRPETIT-SLYNVNDNTGVCITGRAPDGKALVQKARNEASEYKYRYGMPMLVSVLAKPWQDMAQVRTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIY 154
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA6_DICDI (Proteasome subunit alpha type-6 OS=Dictyostelium discoideum GN=psmA6 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.258e-12 Identity = 40/121 (33.06%), Postives = 67/121 (55.37%), Query Frame = 1 Query: 22 IFSPEGRLYQVEYAMEAIGNAG-SAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTPVWRSPPL 381 IFSP+G+LYQ+EYA +AI G +++GI KD VV+ +KK+ KL+ + T +YK+ D++ C GI+ D+ + A + + + + +P L + + D Q T + PL Sbjct: 14 IFSPQGKLYQIEYAFKAIKTGGLTSVGIRGKDCVVVATQKKIPDKLIDPKSVT-SLYKLTDYIGCVQTGIVPDSKSQASRAIQECATFHHKFGYQIPPNVLAKRMADIAQLSTQHASARPL 133
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSMB_METTH (Proteasome subunit beta OS=Methanobacterium thermoautotrophicum GN=psmB PE=3 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 6.045e-12 Identity = 25/76 (32.89%), Postives = 44/76 (57.89%), Query Frame = 1 Query: 88 SAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVE 315 + +GI KDGVV E++ + L +T+K++KID+H+A +AG ++DA L+ + +A Y E + +E Sbjct: 11 TTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSEKISIE 86 HSP 2 Score: 36.965 bits (84), Expect = 6.045e-12 Identity = 22/72 (30.56%), Postives = 34/72 (47.22%), Query Frame = 2 Query: 377 PFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTM 592 PF V L G D+N G ++Y DPSG K +L+ Y D++ +EAV +A++ + M Sbjct: 103 PFIVQTLLGGVDEN-GAKIYSLDPSGGMIPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIKSAM 173
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA4_ENCCU (Probable proteasome subunit alpha type-4 OS=Encephalitozoon cuniculi GN=PRE9 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12 Identity = 39/115 (33.91%), Postives = 63/115 (54.78%), Query Frame = 1 Query: 13 RTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 ++ F+ EGRL QVE+A++ + AG+ IG + DGVVL+G K T+ EK+Y++ D + C + G+ DA L AR++AQ + P+ L + + KQ +T Sbjct: 7 KSNTFTDEGRLPQVEFAIKNVSRAGTIIGYVCSDGVVLMGVNKE-----PTNGPMEKIYQLSDSIYCVLCGLFGDAMELKRYARIKAQEVLERFGVECPLTTLCKFVGQRKQAFT 116 The following BLAST results are available for this feature:
BLAST of CF417381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417381 ID=CF417381; Name=CF417381; organism=Citrus sinensis; type=EST; length=681bpback to top |