CF417381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSMA_HALS3 (Proteasome subunit alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=psmA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 5.089e-31 Identity = 61/125 (48.80%), Postives = 82/125 (65.60%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTPVWRSPP 378 YD TIFSP+GRLYQVEYA EA+ ++IG+ + +GVVLV +K+ S LL+ S S EK++KIDDHV A AG ++DA L++ AR Q+Q Y EP+ V L +S+ D Q YT V + P Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLVVDKQTRSPLLEGS-SVEKLHKIDDHVGAASAGHVADARQLVDFARQQSQVERVRYDEPIGVRTLTKSVTDHIQQYTQVGGARP 133 HSP 2 Score: 46.595 bits (109), Expect = 5.089e-31 Identity = 25/76 (32.89%), Postives = 39/76 (51.32%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSK 586 Q GG RPFGV+ L AG + +L+ +DPSG WK L+ +Y +S ++ + LAL+ L++ Sbjct: 127 QVGGARPFGVALLIAGVEGGEP-RLFETDPSGTSNEWKAVAIGSNRGDIQEFLEDEYDAGLSVDDGIDLALRALNE 201
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA7_CARAU (Proteasome subunit alpha type-7 OS=Carassius auratus GN=psma7 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.089e-31 Identity = 53/119 (44.54%), Postives = 75/119 (63.03%), Query Frame = 1 Query: 1 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 RYD T+FSP+G L+QVEYA EA+ +A+GI KD VVL EKK +K LQ + K+ +D+HV A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YT Sbjct: 4 RYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGKDIVVLGVEKKSVAK-LQEERTVRKICALDEHVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIATLKQRYT 121 HSP 2 Score: 52.7582 bits (125), Expect = 5.089e-31 Identity = 28/76 (36.84%), Postives = 41/76 (53.95%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDD--ISREEAVQLALKVL 580 Q G RPFG+S L G+D + +LY +DPSG Y WK L+++Y D+ S +A++LA+K L Sbjct: 122 QSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIASDNDAIKLAIKAL 197
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSMA_METS3 (Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 5.091e-31 Identity = 55/118 (46.61%), Postives = 81/118 (68.64%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 YD T+FSP+GRL+QVEYA EA+ ++IGI +G+VL +K+ TS L++ +TS EK++KID+H+ A +G+++DA L+ ARV+AQ Y EP+ V+ L + LCD Q YT Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTSIGIKCSEGIVLAVDKRTTSNLVE-ATSIEKIFKIDEHIGAATSGLVADARALVERARVEAQINKITYSEPIRVDSLSKKLCDMLQMYT 125 HSP 2 Score: 41.5874 bits (96), Expect = 5.091e-31 Identity = 24/76 (31.58%), Postives = 38/76 (50.00%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSK 586 Q GG+RPFG + + G +L+ +DPSG +K I + YKDD++ EA+ LAL +++ Sbjct: 126 QNGGVRPFGSALIIGGVYDGI-CKLFETDPSGALIEYKATAIGSGRSAAMDIFEDQYKDDMNLNEAINLALTAINE 200
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSMA_HALWD (Proteasome subunit alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=psmA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.091e-31 Identity = 59/125 (47.20%), Postives = 81/125 (64.80%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTPVWRSPP 378 YD TIFSP+GRLYQVEYA EA+ +++GI + DG+VL +K+ S L++ TS EK++K DDHV A AG ++DA LI+ AR QAQ Y EP+ +E L +++ D Q YT V + P Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGIRTPDGIVLAADKRSRSPLME-PTSVEKIHKTDDHVGIASAGHVADARQLIDFARRQAQVNRLRYGEPVGIETLTKNVTDNIQQYTQVGGARP 133 HSP 2 Score: 47.3654 bits (111), Expect = 5.091e-31 Identity = 26/75 (34.67%), Postives = 40/75 (53.33%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLS 583 Q GG RPFGV+ L G + +LY +DPSG WK L+++Y +++S +E V LAL+ ++ Sbjct: 127 QVGGARPFGVALLIGGIEDGSP-RLYETDPSGTPYEWKAVSIGADRSDLQEHLEENYTEELSLDEGVGLALRTIA 200
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSMA_NATPD (Proteasome subunit alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=psmA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.124e-30 Identity = 62/125 (49.60%), Postives = 84/125 (67.20%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTPVWRSPP 378 YD TIFSP+GRLYQVEYA EA+ ++IGI ++DGVVLV +K++ S L++ TS EK++K DDH+ A AG ++DA LI+ AR QAQ Y EP+ VE L +++ D Q YT V + P Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGIRTEDGVVLVVDKRIRSPLME-RTSVEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYDEPIGVETLTKAVTDHIQQYTQVGGARP 133 HSP 2 Score: 42.3578 bits (98), Expect = 1.124e-30 Identity = 23/75 (30.67%), Postives = 36/75 (48.00%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLS 583 Q GG RPFGV+ + G + +LY +DPSG W+ L++ Y + + E + LAL+ L+ Sbjct: 127 QVGGARPFGVALIIGGIEDGEP-RLYETDPSGTPYEWQALAVGADRGDIQEYLEEHYSESLDTEAGIGLALEALA 200
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA2_DICDI (Proteasome subunit alpha type-2 OS=Dictyostelium discoideum GN=psmA2 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.466e-30 Identity = 49/118 (41.53%), Postives = 75/118 (63.56%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 Y T FSP G+L Q+E+A++A + GSAIGI +K+GVVL+ EKK+ S L TS +K+ I +++ AG+ D+ +LI AR ++++Y Y+E +PV QLV+ L Q +T Sbjct: 5 YSFSLTTFSPSGKLVQIEHALQAAASGGSAIGIKAKNGVVLITEKKLHS--LVDVTSVQKISMITENIGLVYAGMGPDSRVLIKKARKESEKYYKQYKEKIPVLQLVRELASIMQEFT 120 HSP 2 Score: 62.003 bits (149), Expect = 1.466e-30 Identity = 32/71 (45.07%), Postives = 42/71 (59.15%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLAL 571 Q GG+RPFGVS L AG+D+ G LY DPSG+Y WK + L++ Y DD+ E+A+Q AL Sbjct: 121 QSGGVRPFGVSLLVAGFDEK-GPHLYQVDPSGSYFAWKATAIGKNMVSSKTFLEKRYSDDLEIEDAIQTAL 190
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA7L_MACFA (Proteasome subunit alpha type-7-like OS=Macaca fascicularis GN=PSMA7L PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.906e-30 Identity = 51/119 (42.86%), Postives = 74/119 (62.18%), Query Frame = 1 Query: 1 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 RYD T+FSP+G L+QVEYA EA+ +A+GI + VVL EKK +KL Q + K+ +DDHV A AG+ +DA ++IN ARV+ Q + ++P+ VE + + + KQ YT Sbjct: 4 RYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKL-QDERTVRKICALDDHVCMAFAGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYT 121 HSP 2 Score: 53.9138 bits (128), Expect = 1.906e-30 Identity = 29/76 (38.16%), Postives = 41/76 (53.95%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDD--ISREEAVQLALKVL 580 Q G RPFG+S L G+D + +LY +DPSG Y WK L+++Y +D S EA++LA+K L Sbjct: 122 QSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDNEAIKLAIKAL 197
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSJ (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. japonica GN=PAD1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.482e-30 Identity = 52/119 (43.70%), Postives = 75/119 (63.03%), Query Frame = 1 Query: 1 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 RYD T+FSP+G L+QVEYA+EA+ +A+G+ D VVL EKK T K LQ S S K+ +D H+A A AG+ +DA +LIN ARV+ Q + ++ + VE + + + +Q YT Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPK-LQDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYT 120 HSP 2 Score: 50.8322 bits (120), Expect = 2.482e-30 Identity = 30/82 (36.59%), Postives = 45/82 (54.88%), Query Frame = 2 Query: 338 IQSKVTPQFGGLRPFGVSFLFAGWDKNYGFQ-LYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVL 580 +Q K T Q GG+RPFG+S L G+D LY +DPSG + WK L+++YK + S +E ++LA++ L Sbjct: 115 LQQKYT-QSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK-ETSGKETIKLAIRAL 194
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSI (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. indica GN=PAD1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.482e-30 Identity = 52/119 (43.70%), Postives = 75/119 (63.03%), Query Frame = 1 Query: 1 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 RYD T+FSP+G L+QVEYA+EA+ +A+G+ D VVL EKK T K LQ S S K+ +D H+A A AG+ +DA +LIN ARV+ Q + ++ + VE + + + +Q YT Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPK-LQDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYT 120 HSP 2 Score: 50.8322 bits (120), Expect = 2.482e-30 Identity = 30/82 (36.59%), Postives = 45/82 (54.88%), Query Frame = 2 Query: 338 IQSKVTPQFGGLRPFGVSFLFAGWDKNYGFQ-LYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVL 580 +Q K T Q GG+RPFG+S L G+D LY +DPSG + WK L+++YK + S +E ++LA++ L Sbjct: 115 LQQKYT-QSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK-ETSGKETIKLAIRAL 194
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA5_YEAST (Proteasome component PUP2 OS=Saccharomyces cerevisiae GN=PUP2 PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 4.204e-30 Identity = 56/112 (50.00%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCD 339 YD + FSPEGRL+QVEY++EAI +AIGI +K+GVVL EK+ TS LL+ S S EK+ +ID H+ CA++G+ +DA +I AR A + Y E + VE L QS+CD Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLLE-SDSIEKIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCD 118 HSP 2 Score: 45.8246 bits (107), Expect = 4.204e-30 Identity = 23/73 (31.51%), Postives = 39/73 (53.42%), Query Frame = 2 Query: 374 RPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTM 592 RPFGV+ L AG D + G+QL+ ++PSG + + + L ++ ++ +EA L LK+L + M Sbjct: 136 RPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSLTLKEAELLVLKILKQVM 208 The following BLAST results are available for this feature:
BLAST of CF417381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417381 ID=CF417381; Name=CF417381; organism=Citrus sinensis; type=EST; length=681bpback to top |