CF417381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA5_BOVIN (Proteasome subunit alpha type-5 OS=Bos taurus GN=PSMA5 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.207e-28 Identity = 53/110 (48.18%), Postives = 77/110 (70.00%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSL 333 YD FSPEGRL+QVEYA+EAI +AIGI + +GV L EK++TS L++ S S EK+ +ID H+ CA++G+++DA LI+ ARV+ Q + + Y E M VE + Q++ Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAV 116 HSP 2 Score: 40.0466 bits (92), Expect = 2.207e-28 Identity = 24/73 (32.88%), Postives = 38/73 (52.05%), Query Frame = 2 Query: 374 RPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTM 592 RPFGV+ LF G D+ G QL+ DPSG + S L++ Y ++ +EA++ +L +L + M Sbjct: 135 RPFGVALLFGGVDEK-GPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVM 206
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA2_DROME (Proteasome subunit alpha type-2 OS=Drosophila melanogaster GN=Pros25 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.208e-28 Identity = 45/119 (37.82%), Postives = 67/119 (56.30%), Query Frame = 1 Query: 1 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 RY T FSP G+L Q+EYA+ A+ ++GI++ +GVV+ E K S L + S ++ I +H+ +G+ D +L+ AR AQ Y Y+EP+PV QLVQ + Q YT Sbjct: 5 RYSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYE-QHSVHRVEMIYNHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYT 122 HSP 2 Score: 61.2326 bits (147), Expect = 2.208e-28 Identity = 30/76 (39.47%), Postives = 42/76 (55.26%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSK 586 Q GG+RPFGVS L GWD + + LY SDPSG Y WK + L++ Y +D+ ++AV A+ L + Sbjct: 123 QSGGVRPFGVSLLICGWDNDRPY-LYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDAVHTAILTLKE 197
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA4L_DROME (Proteasome subunit alpha type-4-like OS=Drosophila melanogaster GN=Prosalpha3T PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.483e-28 Identity = 66/146 (45.21%), Postives = 95/146 (65.07%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTPVWRSPPLWCFISF------CRVGQKLW 423 +DSRTTIFSPEGRLYQVEYAMEA +G+ +G+L+K+GV+L E+ V KL+ TS ++ +++++AC G +D N+L+N R+ AQ+Y + + E +P EQLV +LCD KQ YT P +SF CR G +L+ Sbjct: 5 FDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKNGVLLATERSV-DKLMDTSIPVPRISWLNENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFG--VSFLYMGWDCRFGFQLY 147 HSP 2 Score: 79.7221 bits (195), Expect = 1.549e-14 Identity = 43/95 (45.26%), Postives = 56/95 (58.95%), Query Frame = 2 Query: 326 NLFVIQSKVTPQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKD----DISREEAVQLALKVLSKTMGQ 598 NL I+ T Q+GG RPFGVSFL+ GWD +GFQLY SDPSGNY GWK +L+++ S EEA +A+KV+ T+G+ Sbjct: 112 NLCDIKQAYT-QYGGKRPFGVSFLYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDVAIKVMGMTLGR 205
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA7_HUMAN (Proteasome subunit alpha type-7 OS=Homo sapiens GN=PSMA7 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.870e-28 Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 YD T+FSP+G L+QVEYA EA+ +A+G+ +D VVL EKK +KL Q + K+ +DD+V A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YT Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKL-QDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYT 119 HSP 2 Score: 47.7506 bits (112), Expect = 2.870e-28 Identity = 25/76 (32.89%), Postives = 38/76 (50.00%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREE--AVQLALKVL 580 Q G RPFG+S L G+D + +LY +DPSG Y WK L+++Y D+ + ++L +K L Sbjct: 120 QSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 195
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAB (Proteasome subunit alpha OS=Pyrococcus abyssi GN=psmA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.235e-28 Identity = 63/146 (43.15%), Postives = 94/146 (64.38%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTPVWRSPPLWCFISFCRVGQKLWLPTLHE 441 YD T+FSP+GRL+QV YA EA+ +A+G+ KDGVVL EK++TS+L++ S EK+++IDDH+A A +GI++DA +L+N AR++AQ + Y EP P+ +V+ +CD KQ +T P + V K P L+E Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCKDGVVLAVEKRITSRLIEPE-SYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNDK---PELYE 151
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSJ (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica GN=PAB1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.343e-28 Identity = 42/119 (35.29%), Postives = 72/119 (60.50%), Query Frame = 1 Query: 1 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 +Y T FSP G+L Q+E+A+ A+G+ +++GI + +GVV+ EKK+ S +L TS +K+ + ++ +G+ D +L+ +R QAQ+Y Y+E +PV QLV+ Q +T Sbjct: 5 QYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPS-ILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFT 122 HSP 2 Score: 61.6178 bits (148), Expect = 6.343e-28 Identity = 31/76 (40.79%), Postives = 44/76 (57.89%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSK 586 Q GG+RPFGVS L AG+D N G QLY DPSG+Y WK + L++ Y +D+ ++A+ A+ L + Sbjct: 123 QSGGVRPFGVSLLIAGYDDN-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKE 197
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSI (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica GN=PAB1 PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 6.343e-28 Identity = 42/119 (35.29%), Postives = 72/119 (60.50%), Query Frame = 1 Query: 1 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 +Y T FSP G+L Q+E+A+ A+G+ +++GI + +GVV+ EKK+ S +L TS +K+ + ++ +G+ D +L+ +R QAQ+Y Y+E +PV QLV+ Q +T Sbjct: 5 QYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPS-ILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFT 122 HSP 2 Score: 61.6178 bits (148), Expect = 6.343e-28 Identity = 31/76 (40.79%), Postives = 44/76 (57.89%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSK 586 Q GG+RPFGVS L AG+D N G QLY DPSG+Y WK + L++ Y +D+ ++A+ A+ L + Sbjct: 123 QSGGVRPFGVSLLIAGYDDN-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKE 197
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA5_DROME (Proteasome subunit alpha type-5 OS=Drosophila melanogaster GN=Prosalpha5 PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.074e-27 Identity = 53/110 (48.18%), Postives = 74/110 (67.27%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSL 333 YD FSPEGRL+QVEYA+EAI +AIGI + +GVVL EK++TS L+ ST EK+ ++D H+ CA +G+M+DA LI ARV+ Q + + Y E M +E Q++ Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPST-VEKIVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAV 116 HSP 2 Score: 37.3502 bits (85), Expect = 1.074e-27 Identity = 22/73 (30.14%), Postives = 36/73 (49.32%), Query Frame = 2 Query: 374 RPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTM 592 RPFGV+ LFAG + QL+ DPSG + L+ ++ D++ +EA+ ++L L + M Sbjct: 137 RPFGVAILFAGIEAGQP-QLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDISLNTLKQVM 208
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSMA2_HALVO (Proteasome subunit alpha 2 OS=Halobacterium volcanii GN=psmA2 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.398e-27 Identity = 50/118 (42.37%), Postives = 75/118 (63.56%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 YD T++FSP+GR+YQVEYA EA+ +G+ + DGVVL + S+L++ + S EK++K+DD + A AG ++DA L++ AR AQR Y EP+ VE L +++ D Q T Sbjct: 9 YDRGTSLFSPDGRIYQVEYAREAVKRGAPVLGVRTADGVVLAALRSTPSELME-AESIEKLHKLDDALGAATAGHVADARKLVDFARTTAQREHLRYGEPIGVETLTKTITDNIQEST 125 HSP 2 Score: 47.3654 bits (111), Expect = 1.398e-27 Identity = 25/74 (33.78%), Postives = 38/74 (51.35%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVL 580 Q GG RP+G S L G + G +L+ +DPSG WK + L+ Y +D+S E+ + LA++ L Sbjct: 126 QSGGTRPYGASLLIGGVENGSG-RLFATDPSGTPQEWKAVAIGGHREDVQAALEDGYAEDLSLEDGLALAVEAL 198
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA7_PONAB (Proteasome subunit alpha type-7 OS=Pongo abelii GN=PSMA7 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 1.819e-27 Identity = 50/118 (42.37%), Postives = 73/118 (61.86%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 YD T+FSP+G L+QVEYA EAI +A+G+ +D VVL EKK +K LQ + K+ +DD+V A AG+ +DA I+IN ARV+ Q + ++ + VE + + + KQ YT Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAIKKGSTAVGVRGRDIVVLGVEKKSVAK-LQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDSVTVEYITRYIASLKQRYT 119 HSP 2 Score: 47.7506 bits (112), Expect = 1.819e-27 Identity = 25/76 (32.89%), Postives = 38/76 (50.00%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREE--AVQLALKVL 580 Q G RPFG+S L G+D + +LY +DPSG Y WK L+++Y D+ + ++L +K L Sbjct: 120 QSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 195 The following BLAST results are available for this feature:
BLAST of CF417381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417381 ID=CF417381; Name=CF417381; organism=Citrus sinensis; type=EST; length=681bpback to top |