CF417419

Overview
NameCF417419
Unique NameCF417419
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF417419 vs. ExPASy Swiss-Prot
Match: IFRH_ARATH (Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.394e-39
Identity = 79/123 (64.23%), Postives = 98/123 (79.67%), Query Frame = 1 
Query:  298 KLFITRKMILEPILIKAVDDPRTLNKILYIKPPGNIYSFNDLVSLWERKIGKTLERVYVPEEQVLKNIQEAAPPVNVILSIQHSAFVKGDQTNFQIEPSFGVEASQLYPQVKYTTVDEYLSQF 666
            K  I ++  +    IKAVDDPRTLNKILYIKP  N  S N++V+LWE+KIGK+LE+ ++PEEQ+LK+IQE+  P+NV+LSI H+ FV GD TN  IEPSFGVEAS+LYP VKYT+VDEYLS F
Sbjct:  188 KAVINKEEDIAAYTIKAVDDPRTLNKILYIKPSNNTLSMNEIVTLWEKKIGKSLEKTHLPEEQLLKSIQESPIPINVVLSINHAVFVNGD-TNISIEPSFGVEASELYPDVKYTSVDEYLSYF 309

HSP 2 Score: 157.147 bits (396), Expect = 7.633e-38
Identity = 78/113 (69.03%), Postives = 88/113 (77.88%), Query Frame = 3 
Query:   15 DQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYVASNFFAAYFLPNLSQ--PGATAPPRDKVVILGDGNPKAVYNKEDDIGTYTYQS 347
            DQ KII+AIKEAGN+KRF PSEFG DVDR  AVEPAKSAFA K +IRR +EAEGIPYTY  +  F  Y+LP L Q  PG T+PPRDKV ILGDGN KAV NKE+DI  YT ++
Sbjct:   92 DQTKIISAIKEAGNVKRFLPSEFGVDVDRTSAVEPAKSAFAGKIQIRRTIEAEGIPYTYAVTGCFGGYYLPTLVQFEPGLTSPPRDKVTILGDGNAKAVINKEEDIAAYTIKA 204
The following BLAST results are available for this feature:
BLAST of CF417419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
IFRH_ARATH2.394e-3964.23Isoflavone reductase homolog P3 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-349 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-005_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417419 ID=CF417419; Name=CF417419; organism=Citrus sinensis; type=EST; length=681bp
ACACTTTATTAGGTGATCAGGTCAAGATTATTGCGGCCATTAAAGAAGCT
GGTAACATTAAGAGATTCTTCCCTTCAGAATTTGGGAATGATGTTGATCG
AGTCCATGCCGTTGAGCCAGCAAAATCAGCATTTGCCACAAAGGCGAAAA
TCCGCCGAGCCGTTGAGGCTGAAGGGATTCCGTATACTTATGTAGCGTCG
AATTTCTTTGCTGCTTACTTCCTTCCCAATTTGTCGCAGCCCGGGGCCAC
TGCCCCACCTAGGGATAAAGTTGTCATCTTAGGCGATGGAAATCCTAAAG
CTGTTTATAACAAGGAAGATGATATTGGAACCTATACTTATCAAAGCGGT
TGATGATCCCAGAACCTTGAACAAAATCCTTTACATTAAACCCCCTGGTA
ATATTTACTCATTCAATGATCTTGTGTCCTTGTGGGAGAGAAAGATTGGC
AAAACCCTCGAAAGGGTGTACGTTCCGGAGGAGCAAGTCCTAAAGAATAT
TCAAGAAGCTGCACCTCCAGTCAATGTGATATTATCAATTCAGCACTCTG
CTTTCGTGAAGGGAGATCAAACCAACTTCCAGATTGAACCATCGTTTGGA
GTTGAAGCCTCGCAGCTTTATCCTCAAGTCAAGTACACTACAGTTGATGA
GTATCTCAGTCAGTTTGTGTAACCCTTCTCT
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