CF417449

Overview
NameCF417449
Unique NameCF417449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 8.600e-32
Identity = 69/176 (39.20%), Postives = 103/176 (58.52%), Query Frame = 3
Query:   27 TAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGSTN 554
            TA      + F ++ L+  T+ F + N +G G  G VY+A L DG  +AVK+ +        +  F   +  + +IRH NIV L GYC+E G+RLL+YEY  +GTL D LH D    + L W+ R+++ L AAR L+YLH    PPI+HR+ K++NILLD ++   ++     S+N
Sbjct:  497 TAVSLGETKIFRLSELKDATHGFKEFNELGRGSFGFVYKAVLSDGIHVAVKRANAATIIHSNNRGFESELEILCKIRHNNIVNLLGYCSEMGERLLVYEYMPHGTLHDHLHGD---LSQLDWSMRLKIMLQAARGLDYLHNEVDPPIIHRDVKTSNILLDGEMCARIADFGLVSSN 669          

HSP 2 Score: 26.1794 bits (56), Expect = 8.600e-32
Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = 1
Query:  646 QSDVYSFGVVMLELLT 693
            + DVY FG+V+LE+L+
Sbjct:  679 EGDVYDFGIVLLEILS 694          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.619e-32
Identity = 68/173 (39.31%), Postives = 103/173 (59.54%), Query Frame = 3
Query:   45 TARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLH-SDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGSTNII 560
            ++R FT   + + TN+FS++NLIG G  G V++A L DG + A+K+   + ++ +  D+ L  V  + ++ H ++V L G C +    LLIYE+  NGTL + LH S D     L+W  R+++A   A  L YLH   QPPI HR+ KS+NILLD+ L   VS   FG + ++
Sbjct:  347 SSRIFTGREITKATNNFSKDNLIGTGGFGEVFKAVLEDGTITAIKRA--KLNNTKGTDQILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSD--FGLSRLV 515          

HSP 2 Score: 36.1946 bits (82), Expect = 8.619e-32
Identity = 22/57 (38.60%), Postives = 31/57 (54.39%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTA----YGYGAPEFESGIY-TCQSDVYSFGVVMLELLT 693
            GL+ L+     +    H+ T      GY  PE+      T +SDVYSFGVV+LE++T
Sbjct:  510 GLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVT 566          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 8.626e-32
Identity = 69/176 (39.20%), Postives = 99/176 (56.25%), Query Frame = 3
Query:   42 TTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCA-----EHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGSTN 554
            TT   F+   +++ TN+FS+ N+IG G  G+V++  LPDG  +A K+   +  S   D  F   V  I  IRH N++ L+GYC      E  QR+++ +  SNG+L D L  D  L+  L+W  R R+ALG AR L YLH   QP I+HR+ K++NILLD+     V+       N
Sbjct:  266 TTLVKFSFDEIKKATNNFSRHNIIGRGGYGNVFKGALPDGTQVAFKRF--KNCSAGGDANFAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGD--LEAQLAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFN 437          

HSP 2 Score: 38.891 bits (89), Expect = 8.626e-32
Identity = 25/53 (47.17%), Postives = 33/53 (62.26%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEFES-GIYTCQSDVYSFGVVMLELLT 693
            GLA     G ++ +S  +    GY APE+   G  T +SDVYSFGVV+LELL+
Sbjct:  432 GLAKFNPEG-MTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLS 483          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.115e-31
Identity = 60/144 (41.67%), Postives = 84/144 (58.33%), Query Frame = 3
Query:  105 NLIGAGMLGSVYRAQLPDGKLLAVKKL--------DKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDD 512
            N+IG G  G VY+A++P+ +++AVKKL        +++  S    D F   V  +  IRH NIV   G C     RLL+Y+Y SNG+L  +LH    + + L W  R ++ LGAA+ L YLH  C PPIVHR+ K+ NIL+  D
Sbjct:  789 NVIGKGCSGIVYKAEMPNREVIAVKKLWPVTVPNLNEKTKSSGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNKNTRLLMYDYMSNGSLGSLLHERSGVCS-LGWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPD 931          

HSP 2 Score: 46.9802 bits (110), Expect = 1.115e-31
Identity = 25/53 (47.17%), Postives = 36/53 (67.92%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YTCQSDVYSFGVVMLELLT 693
            GLA L+  G  ++ S  +  +YGY APE+   +  T +SDVYS+GVV+LE+LT
Sbjct:  940 GLAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLT 992          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.116e-31
Identity = 71/183 (38.80%), Postives = 101/183 (55.19%), Query Frame = 3
Query:    6 AVKASTKTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKR--------ASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVS 530
            A+K+ST  A  + +      +   +  +   ++N+IG G  G VY+ +L  G+++AVKKL+K         +S     D F   V  +  IRH +IV L   C+    +LL+YEY  NG+L D+LH D +    L W  R+R+AL AA  L YLH  C PPIVHR+ KS+NILLD D    V+
Sbjct:  655 ALKSSTLAASKWRSFHKLHFSE-HEIADCLDEKNVIGFGSSGKVYKVELRGGEVVAVKKLNKSVKGGDDEYSSDSLNRDVFAAEVETLGTIRHKSIVRLWCCCSSGDCKLLVYEYMPNGSLADVLHGDRKGGVVLGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNILLDSDYGAKVA 836          

HSP 2 Score: 35.039 bits (79), Expect = 1.116e-31
Identity = 19/34 (55.88%), Postives = 25/34 (73.53%), Query Frame = 1
Query:  604 GYGAPEFESGIYTCQ----SDVYSFGVVMLELLT 693
            GY APE+   +YT +    SD+YSFGVV+LEL+T
Sbjct:  863 GYIAPEY---VYTLRVNEKSDIYSFGVVLLELVT 893          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.123e-31
Identity = 59/157 (37.58%), Postives = 95/157 (60.51%), Query Frame = 3
Query:   63 IASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLH-SDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVS 530
            ++ L + T  F ++N+I  G  G++Y+ +L DG LL +K+L     SQ+ + EF   +  +  +++ N+V L GYC  + +RLL+YEY +NG L D LH +D+E    L W +R+++A+G A+ L +LH  C P I+HRN  S  ILL  +    +S
Sbjct:  293 LSDLMKATEEFKKDNIIATGRTGTMYKGRLEDGSLLMIKRLQ---DSQRSEKEFDAEMKTLGSVKNRNLVPLLGYCVANKERLLMYEYMANGYLYDQLHPADEESFKPLDWPSRLKIAIGTAKGLAWLHHSCNPRIIHRNISSKCILLTAEFEPKIS 446          

HSP 2 Score: 36.965 bits (84), Expect = 1.123e-31
Identity = 18/32 (56.25%), Postives = 25/32 (78.12%), Query Frame = 1
Query:  601 YGYGAPEFE-SGIYTCQSDVYSFGVVMLELLT 693
            +GY APE+  + + T + DVYSFGVV+LEL+T
Sbjct:  472 FGYVAPEYSRTMVATPKGDVYSFGVVLLELVT 503          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 1.453e-31
Identity = 63/159 (39.62%), Postives = 97/159 (61.01%), Query Frame = 3
Query:   54 SFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVS 530
            SFT+  +++ TN+F  EN IG G  G VY+  L DG  +AVK+L  +  S+Q + EF+  +  I  ++H N+V+L G C E  + LL+YEY  N +L   L   ++ + +L W+TR ++ +G A+ L YLHE  +  IVHR+ K+ N+LLD  L   +S
Sbjct:  654 SFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSK--SKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKIS 810          

HSP 2 Score: 35.4242 bits (80), Expect = 1.453e-31
Identity = 22/53 (41.51%), Postives = 32/53 (60.38%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEFES-GIYTCQSDVYSFGVVMLELLT 693
            GLA L    + + +S  +    GY APE+   G  T ++DVYSFGVV LE+++
Sbjct:  813 GLAKLDEEEN-THISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVS 864          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 113.62 bits (283), Expect = 1.454e-31
Identity = 62/144 (43.06%), Postives = 85/144 (59.03%), Query Frame = 3
Query:   99 QENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVS 530
            +EN+IG G  G VYR  +P+   +A+K+L  R + +  D  F   +  + RIRH +IV L GY A     LL+YEY  NG+L ++LH       +L W TR R+A+ AA+ L YLH  C P I+HR+ KS NILLD D    V+
Sbjct:  694 EENIIGKGGAGIVYRGSMPNNVDVAIKRLVGRGTGRS-DHGFTAEIQTLGRIRHRHIVRLLGYVANKDTNLLLYEYMPNGSLGELLHGSKG--GHLQWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVA 834          

HSP 2 Score: 43.8986 bits (102), Expect = 1.454e-31
Identity = 23/52 (44.23%), Postives = 33/52 (63.46%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEFESGIYTCQ-SDVYSFGVVMLELL 690
            GLA  +  G+ S+    +  +YGY APE+   +   + SDVYSFGVV+LEL+
Sbjct:  837 GLAKFLVDGAASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELI 888          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 1.455e-31
Identity = 67/173 (38.73%), Postives = 102/173 (58.96%), Query Frame = 3
Query:   12 KASTKTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVS 530
            K S+K +      +SFT A L   T++F+    IG G  G VY+  L  G ++A+K+  +   S Q + EFL  +  + R+ H N+V L G+C E G+++L+YEY  NGTL+D +    +LK  L +  R+R+ALG+A+ + YLH    PPI HR+ K++NILLD      V+
Sbjct:  598 KRSSKASLKIEGVKSFTYAELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQE--GSLQGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNI--SVKLKEPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVA 766          

HSP 2 Score: 30.4166 bits (67), Expect = 1.455e-31
Identity = 18/31 (58.06%), Postives = 21/31 (67.74%), Query Frame = 1
Query:  604 GYGAPE-FESGIYTCQSDVYSFGVVMLELLT 693
            GY  PE F +   T +SDVYS GVV+LEL T
Sbjct:  796 GYLDPEYFLTHQLTDKSDVYSLGVVLLELFT 826          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.897e-31
Identity = 64/163 (39.26%), Postives = 98/163 (60.12%), Query Frame = 3
Query:   63 IASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGST 551
            + ++++ TNSF +   IG G  G VY+ +L DG  +AVK+ + +  SQQ   EF   +  + + RH ++V L GYC E+ + +L+YEY  NGTL+  L+    L  +LSW  R+ + +G+AR L YLH     P++HR+ KSANILLD++L   V+      T
Sbjct:  472 LVAVKEATNSFDENRAIGVGGFGKVYKGELHDGTKVAVKRANPK--SQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILVYEYMENGTLKSHLYGSGLL--SLSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKT 630          

HSP 2 Score: 32.3426 bits (72), Expect = 1.897e-31
Identity = 18/32 (56.25%), Postives = 22/32 (68.75%), Query Frame = 1
Query:  598 AYGYGAPE-FESGIYTCQSDVYSFGVVMLELL 690
            ++GY  PE F     T +SDVYSFGVVM E+L
Sbjct:  646 SFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVL 677          
The following BLAST results are available for this feature:
BLAST of CF417449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 329
Match NameE-valueIdentityDescription
ACCR2_ARATH8.600e-3239.20Serine/threonine-protein kinase-like protein CCR2 ... [more]
WAKLQ_ARATH8.619e-3239.31Wall-associated receptor kinase-like 20 OS=Arabido... [more]
RKF3_ARATH8.626e-3239.20Probable LRR receptor-like serine/threonine-protei... [more]
RCH1_ARATH1.115e-3141.67LRR receptor-like serine/threonine-protein kinase ... [more]
RLK5_ARATH1.116e-3138.80Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
Y5838_ARATH1.123e-3137.58Probably inactive leucine-rich repeat receptor-lik... [more]
Y5344_ARATH1.453e-3139.62Probable LRR receptor-like serine/threonine-protei... [more]
CLV1_ARATH1.454e-3143.06Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
Y1684_ARATH1.455e-3138.73Probable LRR receptor-like serine/threonine-protei... [more]
Y5597_ARATH1.897e-3139.26Probable receptor-like protein kinase At5g59700 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-379 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-005_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417449 ID=CF417449; Name=CF417449; organism=Citrus sinensis; type=EST; length=693bp
GAACTGCTGTGAAGGCTTCCACTAAAACTGCAAAACCTTTCACAACTGCA
AGGTCTTTCACCATTGCATCCCTTCAACAATATACTAACAGCTTTTCTCA
AGAAAACCTTATAGGTGCTGGCATGCTGGGGAGTGTTTATAGGGCACAGC
TTCCTGATGGAAAGCTACTAGCAGTCAAGAAACTGGACAAGAGGGCTTCA
AGTCAGCAGAAGGATGATGAATTTCTTGAACTGGTGAACAATATTGATCG
AATTCGACATGCTAATATAGTCGAGCTCAAGGGTTACTGCGCAGAGCATG
GCCAAAGGCTTCTTATATATGAGTATTGCAGTAACGGAACTCTGCAGGAT
ATGCTACACTCAGATGATGAATTAAAAAATAATCTTTCATGGAACACCCG
CATTCGGATGGCACTTGGAGCTGCTAGAGCCTTAGAGTACTTGCACGAGA
TTTGTCAACCACCTATTGTACACAGAAATTTTAAGTCGGCCAATATTCTT
CTTGACGATGATCTTGCTGTGAGTGTTTCTGNATTGTGGTTTGGCTCCAC
TAATATCATCAGGTTCAGTTAGTCAGTTGTCAGGACATCTGCTAACAGCT
TATGGTTATGGAGCTCCAGAATTTGAGTCAGGAATTTATACTTGTCAGAG
TGATGTTTACAGCTTTGGGGTAGTTATGCTAGAACTCTTAACA
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