CF417458
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417458 vs. ExPASy Swiss-Prot
Match: SUR8_DROGR (Leucine-rich repeat protein soc-2 homolog OS=Drosophila grimshawi GN=Sur-8 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.076e-11 Identity = 64/257 (24.90%), Postives = 108/257 (42.02%), Query Frame = 1 Query: 7 LRNCTSLIRVRLDGNNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITGGIPCEIGNWSQLQALDLSLNHI----------------------VGEIPKE-LGKLNSLTKLILRGNQLTGRLPTEIGAFNELEYLDLSANRFNNSVPESXXXXXXXXXXXXSNNQFVQELPKELEKLVQLSELDASHNLFGGEIPFQICSLKSLEKLNLSHNNLSGSIPNCFEGMHGLSVIDISDNQLQ 708 LR +L + L N + + A G NLT +D+S N+ + + G C L AL++ N + IP IGN L L L N + + ++P L L++LT + L NQ T F + ++L NR + +P + LP ++ V + EL+ + N ++P I +L++LE L LS NN+ IPN + L ++D+ +N+++ Sbjct: 252 LRQLVNLTMLSLRENKIK-ELGSAIGALVNLTTLDVSHNHLE-HLPEDIGNCVNLSALDLQHNELLD-IPDSIGNLKSLVRLGLRYNRLNCVPVSLKNCKSMDEFNVEGNGITQLPDGMLASLSALTSITLSRNQFTSYPTGGPAQFTNVYSINLEHNRIDK-IPYGIFSRAKGLTKLNMKENMLTALPLDVGTWVNMVELNLATNALQ-KLPDDIMNLQNLEILILS-NNMLKKIPNTIGNLRKLRILDLEENRIE 502
BLAST of CF417458 vs. ExPASy Swiss-Prot
Match: SRF2_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana GN=SRF2 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.629e-11 Identity = 43/128 (33.59%), Postives = 72/128 (56.25%), Query Frame = 1 Query: 49 NNLTGNISKAFGIYPNLTFIDLSRNNFYGEISSNFGECPKLGALNISRNNITGGIPCEIGNWSQLQALDLSLNHIVGEIPKELGKLNSLTKLILRGNQLTGRLPTEIGAFNELEYLDLSANRFNNSVP 432 NNL G I FG+ PN T I+++ NN I + L +LN+S N+++G + + + Q++ +DLS N++ G++P G L +LT L L+ N+LTG + A L L++ N+F+ +P Sbjct: 105 NNLEGEIP--FGLPPNATHINMAYNNLTQSIPFSLPLMTSLQSLNLSHNSLSGPLG-NVFSGLQIKEMDLSFNNLTGDLPSSFGTLMNLTSLYLQNNRLTGSV--IYLADLPLADLNIEDNQFSGIIP 227 The following BLAST results are available for this feature:
BLAST of CF417458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 132
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417458 ID=CF417458; Name=CF417458; organism=Citrus sinensis; type=EST; length=709bpback to top |