CF417459
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA2_GEOMG (Glycogen synthase 2 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glgA2 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.749e-32 Identity = 77/190 (40.53%), Postives = 109/190 (57.37%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAP-LYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLI 569 PD+IHCHDWQ+A + L ++L N V FT HN YQG PA LA GLD L DR++ + RIN LKGAI+ ++ +TTVS +Y E+ + G GL L GILNG+D++ WNP+ D + Y++ L GK +K +++ LGL A A P++G + R+V QKG+ L+ Sbjct: 131 PDVIHCHDWQSALIPIILKYELGHDPFFNRTAVIFTIHNLAYQGVFPADALAQTGLD-PSLFSVDRIE---FYGRINLLKGAILAADAITTVSETYCHEILSPGQGCGLEGVLERRQADLAGILNGLDSEEWNPSLDRRIFRNYSSKSLAGKGADKRELQRELGL-KAGASIPIIGMVGRIVEQKGIDLV 315
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_MYXXD (Glycogen synthase OS=Myxococcus xanthus (strain DK 1622) GN=glgA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.058e-31 Identity = 78/199 (39.20%), Postives = 103/199 (51.76%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGA 599 PDIIH +DWQT V + L A+ FT HN YQG P + L D ++ HD +N LK +VFS+ +TTVSP+YA+E++T E G GL L + + GILNG+DT WNP D FL +Y DL GKA K + GL D P+ G ++RL QKG+ L+ A+ L A Sbjct: 132 PDIIHANDWQTGLVPVALRRGFQTGPLAHAKSVFTIHNLAYQGQFPKDVMGDLALPWDLFTAHDGLE---FHDTVNFLKAGLVFSDALTTVSPTYAREIQTPEQGYGLDGLLRHRAHRLHGILNGVDTHEWNPEDDAFLPARYGLKDLSGKAVCKRELLARFGLE--DGPAPVFGFVSRLAWQKGMDLLLEALPAALHA 325
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: SSY3_SOLTU (Soluble starch synthase 3, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS3 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.147e-31 Identity = 79/198 (39.90%), Postives = 109/198 (55.05%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNA-NDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTL 593 PDIIHCHDW +A VA L+ + Y GL+ +R+ FT HN E+ G D+ + A+ ++ TTVSP+Y+QEV + + H KF GI+NGID D W+P D F+ + Y + N ++GK KE++++ LGL AD PLVG ITRL QKG+HLI+HAI+RTL Sbjct: 902 PDIIHCHDWSSAPVAWLFKEQYTHYGLSKSRIVFTIHNLEF------------GADL--------------------IGRAMTNADKATTVSPTYSQEVSGNP-------VIAPHLHKFHGIVNGIDPDIWDPLNDKFIPIPYTSENVVEGKTAAKEALQRKLGLKQADL--PLVGIITRLTHQKGIHLIKHAIWRTL 1058 HSP 2 Score: 26.5646 bits (57), Expect = 1.147e-31 Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 2 Query: 614 ILLGSSPVPHIQREFEGIAN 673 +LLGS+P P +Q F +AN Sbjct: 1065 VLLGSAPDPRVQNNFVNLAN 1084
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_GEOUR (Glycogen synthase OS=Geobacter uraniireducens (strain Rf4) GN=glgA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.357e-31 Identity = 77/194 (39.69%), Postives = 108/194 (55.67%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYW-----DLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLI 569 PD+IHCHDWQTA + L DL+ K V FT HN YQG + LA GLD + + ++N +KGAI+ ++++TTVS +Y +E++T E G GL L + G+LNG+D D W+PATD L Y+ GKA NK+ ++K LGL A A P++G ++RL QKG L+ Sbjct: 131 PDVIHCHDWQTALIPLLLRREKGEDLFFSK----TGVMFTIHNLAYQGLFAKETLAEMGLDSSYFT----IDCLEYYGKVNLMKGAILSADLITTVSETYCREIQTPESGNGLDGVLGVRNADLHGVLNGLDYDLWDPATDRGLYKNYSVTAPAGKAVNKKGLQKLLGLEPA-ADVPVIGIVSRLTAQKGFDLL 315
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_GEOSF (Glycogen synthase OS=Geobacter sp. (strain FRC-32) GN=glgA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.079e-31 Identity = 79/199 (39.70%), Postives = 111/199 (55.78%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKG----LNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYR 587 PDIIHCHDWQTA + PL L KG + FT HN YQG P + + GLD L D ++ + ++N +KGAI+ ++++ TVS +Y +E+ T E G GL L G+LNGID + WNPATD + + GKA NK++++K LGL A+ PLVG ++RL QKG+ L+ + R Sbjct: 131 PDIIHCHDWQTAMI-PLI--LKKEKGDDLFFSKTGTVFTIHNLAYQGLFPKEAMVDMGLD-PSLFTIDCLE---YYGKVNLIKGAILTADVINTVSETYCREILTPESGDGLDGVLTLRKNDLYGVLNGIDYEHWNPATDRGISKNFTPGAPAGKAANKKALQKRLGLEIAE-DIPLVGMVSRLTEQKGLDLLEALLPR 321
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_ACIBL (Glycogen synthase OS=Acidobacteria bacterium (strain Ellin345) GN=glgA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.079e-31 Identity = 79/212 (37.26%), Postives = 117/212 (55.19%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPK-GLNSARVCFTCHNFEYQGTAPAKELASCGL--DVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIR---------HAIYRTLGAG 602 PDI HCHDWQ+A + L LY + A++ FT HN YQG P + L L D+ L + + + ++N LKGA+V+++ VTTVS YA E++T+E G GL L S GILNG+D W+P TD F+ +++A+ L KA++K + + GL + + P+VG ++R QKG LI+ AI+ LG+G Sbjct: 129 PDIFHCHDWQSALIPVLLRTLYAEDPAFDHAKIVFTIHNMGYQGLFPGEILPLLMLPWDLFTLTKME------FYGKVNFLKGALVYADFVTTVSRRYALEIQTAEYGFGLEGVLRGRSGTVAGILNGVDYSEWSPETDRFIAAKFSADSLAAKAQDKADLLREFGL--PETKLPVVGIVSRFAAQKGFDLIQQVGDRLAREEAIFVVLGSG 332
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_SULSY (Glycogen synthase OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=glgA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.858e-31 Identity = 83/195 (42.56%), Postives = 107/195 (54.87%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAP--AKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAI 581 PD+IH +DWQTA + L + Y + R T HN YQG A E + G D+ M+ +D++N LKG IVFS+ +TTVSP+YA+E+ E G GL L +S K GILNGID D WNP TD ++ Y +Q K+ NK+ K +GL D KPL I RL QKGV LIR +I Sbjct: 130 PDLIHVNDWQTALIPVLNYHKY---NNHHVRTVITIHNLAYQGIFDKFAIERLNLGWDLFH------MEALEYYDKVNFLKGGIVFSSAITTVSPTYAKEITFPEYGYGLDGVLRKYSNKLYGILNGIDYDVWNPETDKYIYENYCVFTIQKKSINKKLFLKEVGLK--DEAKPLYIFIGRLAHQKGVDLIRDSI 313
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_PELCD (Glycogen synthase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=glgA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.858e-31 Identity = 74/201 (36.82%), Postives = 111/201 (55.22%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTC-HNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 P+I+H +DWQT V L + + T HN YQG PA+ +A+ GLD M+ +D+++ LK +V+++++TTVS +Y E++T + G G L+ + + G+LNGID WNP D L Y+ +DL+GKA NK ++K LGL S DA PL+ +TRL QKG+ L+ A + L G Sbjct: 131 PEILHLNDWQTGLVPALLRTEWAEDPFYAGTATMTTIHNLGYQGLFPAETVATLGLDPALYT----MEGLEYYDQVSFLKSGLVYADMITTVSETYCAEIQTPQMGHGFDGILHARAARLFGVLNGIDDKLWNPQCDPALTAPYSVDDLEGKAANKRQLQKQLGL-SCDADVPLLTMVTRLASQKGLDLVEQAWEQLLQRG 326
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_THESQ (Glycogen synthase OS=Thermotoga sp. (strain RQ2) GN=glgA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.957e-31 Identity = 80/194 (41.24%), Postives = 112/194 (57.73%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYV--PKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPD---RMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLI 569 PDI+H +DWQTA + +Y P +A V T HN YQG K L+ GL PD + + ++N LKG IVFS+++ TVSP+YA+E++T E G+ L L SK GILNGID + +NPATD ++ V Y+ N L+ K ENK +++ LGL + + G I+RLVPQKG+ L+ Sbjct: 132 PDIVHVNDWQTALIPVYLKTVYRDDPYFSRTATV-LTIHNLGYQGVFDPKYLSFAGL-------PDYVFTIDGLEFYRQLNFLKGGIVFSDVINTVSPTYAEEIQTEEYGEKLEGVLRMRSKDLYGILNGIDYELYNPATDRYIYVNYDVNRLELKWENKVKLQEELGL-PVNKETAVAGLISRLVPQKGLDLL 316
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_THEP1 (Glycogen synthase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=glgA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.957e-31 Identity = 80/194 (41.24%), Postives = 112/194 (57.73%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYV--PKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPD---RMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLI 569 PDI+H +DWQTA + +Y P +A V T HN YQG K L+ GL PD + + ++N LKG IVFS+++ TVSP+YA+E++T E G+ L L SK GILNGID + +NPATD ++ V Y+ N L+ K ENK +++ LGL + + G I+RLVPQKG+ L+ Sbjct: 132 PDIVHVNDWQTALIPVYLKTVYRDDPYFSRTATV-LTIHNLGYQGVFDPKYLSFAGL-------PDYVFTIDGLEFYRQLNFLKGGIVFSDVINTVSPTYAEEIQTEEYGEKLEGVLRMRSKDLYGILNGIDYELYNPATDRYIYVNYDVNRLELKWENKVKLQEELGL-PVNKETAVAGLISRLVPQKGLDLL 316 The following BLAST results are available for this feature:
BLAST of CF417459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 360
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417459 ID=CF417459; Name=CF417459; organism=Citrus sinensis; type=EST; length=679bpback to top |