CF417459
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_DESVV (Glycogen synthase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=glgA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26 Identity = 73/198 (36.87%), Postives = 101/198 (51.01%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFV-APLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTL 593 P ++H HDWQTA V A LY+ R T HN +QG ++ + GL Q + + N LK I +++ VTTVSPSYA+E+ G GL L + GILNG D D W+P D FL +Y DL GKA+ K ++ + LGL AR+P++G I RL QKG+ L+ + R + Sbjct: 133 PAVLHAHDWQTALVPAFLYFLRQGDPFWQDTRSVLTIHNLAFQGRFASRLFETSGLPPQAWS----VDGAEFWGDFNLLKAGIAYADKVTTVSPSYAREILGPAYGSGLDGILRKRAHALHGILNGADYDIWSPGNDRFLPCRYTPTDLAGKAQCKRALIEELGLDPHLARRPILGFIGRLRGQKGIDLLLDILPRLM 326
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_DESAA (Glycogen synthase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=glgA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26 Identity = 61/193 (31.61%), Postives = 104/193 (53.89%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAI 581 PD+I +DWQT + L ++P+ + F HN Y G P ++ + GL L+ + + +++ LK I ++N + TVSP+Y++E++T+E G GL + S+ GILNG+D W+P TD + Y+ D+ GK + K+++ +G+ S P+ G +TRL QKG+ L+ A+ Sbjct: 132 PDVILANDWQTGLIPALMDQGHMPQTAS----VFVIHNIGYLGYVPPEDASMLGLSNTYLS----YEGMEFYGQLSLLKAGIAYANKLVTVSPTYSREIQTTEQGAGLDGLMRKRSQDLAGILNGVDFQVWSPETDKHIPCNYSTADMAGKGKCKKALLDEMGMDSQLMNAPVAGMVTRLFSQKGIELVIGAV 316
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_BACCQ (Glycogen synthase OS=Bacillus cereus (strain Q1) GN=glgA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26 Identity = 64/191 (33.51%), Postives = 108/191 (56.54%), Query Frame = 3 Query: 6 DIIHCHDWQTAFVAPLYWDLYVPKGL-NSARVCFTCHNFEYQGTAPAKELASCGLDVQQL-NRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIR 572 D++H HDW TA V L + Y L + +T HN ++QG P + + D+ +L + + + +N +KG I+ S+ +T VSP+Y +E++ G+ L L ++ K GI+NGIDT +NP TD+++ QY+A+ L K ENK +++++ GL + P++ +TRL QKG+ L+R Sbjct: 127 DVLHSHDWHTAMVNFLLREKYQDNPLYEHIKTVYTIHNLQFQGVFPPEVM----YDLLELGDEYFHSEQLEFYGNVNFMKGGIIASDQITAVSPTYKEEIQYEFFGEKLDGLLRKYNDKLSGIVNGIDTSVYNPETDSYITAQYDADSLYEKNENKRALQRYFGLPEKE-DTPIISMVTRLTKQKGLDLVR 312
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_BACAN (Glycogen synthase OS=Bacillus anthracis GN=glgA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26 Identity = 64/191 (33.51%), Postives = 108/191 (56.54%), Query Frame = 3 Query: 6 DIIHCHDWQTAFVAPLYWDLYVPKGL-NSARVCFTCHNFEYQGTAPAKELASCGLDVQQL-NRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIR 572 D++H HDW TA V L + Y L + +T HN ++QG P + + D+ +L + + + +N +KG I+ S+ +T VSP+Y +E++ G+ L L ++ K GI+NGIDT +NP TD+++ QY+A+ L K ENK +++++ GL + P++ +TRL QKG+ L+R Sbjct: 127 DVLHSHDWHTAMVNFLLREKYQDNPLYEHIKTVYTIHNLQFQGVFPPEVM----YDLLELGDEYFHSEQLEFYGNVNFMKGGIIASDQITAVSPTYKEEIQYEFFGEKLDGLLRKYNDKLSGIVNGIDTSVYNPETDSYITAQYDADSLYEKNENKRALQRYFGLPEKE-DTPIISMVTRLTKQKGLDLVR 312
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_ANATD (Glycogen synthase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=glgA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26 Identity = 74/201 (36.82%), Postives = 109/201 (54.23%), Query Frame = 3 Query: 6 DIIHCHDWQTAFVAPLYWDLYVPKGL-NSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSA---HDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQG-KAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTL 593 DIIH +DW T+ + L Y N + T HN +YQG P + + L+ PD +D I+ LKG I++S+ V TVS +YA EVRT G+GLH L+ +K +GI+NGID + +NPATD + V Y++N + K ENK +++ L L +D L+G ++RL +KG+ LI I + L Sbjct: 127 DIIHVNDWHTSVIPVLLKAHYGHSDKHNKIKTILTIHNLKYQGIFPKEVMYDL------LSLPDEYFSEDKLKFYDAISFLKGGIIYSDKVVTVSRTYANEVRTLSYGEGLHGLLSGIGEKLIGIINGIDYEVYNPATDKLIFVNYDSNTFENRKKENKFRLQQMLNLPVSD-EIVLIGMVSRLTKEKGIELIERIINKLL 320
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_YERPB (Glycogen synthase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=glgA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.894e-26 Identity = 68/202 (33.66%), Postives = 104/202 (51.49%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLN--FHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 P+++H HDW Y+ AR FT HN YQG A L+ L + ++ + +I+ LK + F++ VTTVSP+YA+E+ G G+ L + GILNG+D+D W+P +DT L +Y+A +LQ KA NK ++ +GL A+ KP+ ++RL QKG+ L+ A+ L G Sbjct: 130 PEVVHAHDWHAGLTCA-----YLAARGRPARSVFTVHNLAYQGLFSADHLSELHLPAEFF----QIYGLEFYGQISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALVRQGRLTGILNGVDSDIWDPQSDTLLPTRYDAENLQAKAINKTHLQTAMGLQLAE-NKPIFAVVSRLTVQKGLDLVLEALPELLALG 321
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_RHOFD (Glycogen synthase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=glgA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.894e-26 Identity = 65/189 (34.39%), Postives = 98/189 (51.85%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLI 569 PD+IHCHDW + + P Y + + FT HN YQG A E+ GL + + +++ +K A+ +++ +TTVSP+YA+E+ + G GL L + GILNG+D WNPATD L Y+ + LQGK K +++ GL A + G ++RL QKG+HL+ Sbjct: 141 PDVIHCHDWHSG-LTPTYVRAFAAAKQATPATVFTIHNLAYQGLFAAAEVTRLGLPKSWFD----IDGFEFFGKVSFMKAALRYADRITTVSPTYAREISSEAQGCGLDGLLRERANSLSGILNGVDDLIWNPATDALLPAPYDEHKLQGKTLAKRALQTKFGLEPR-ANALVFGAVSRLTEQKGLHLL 323
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_RHOCS (Glycogen synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=glgA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.894e-26 Identity = 71/201 (35.32%), Postives = 100/201 (49.75%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPK-GLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 P+IIH HDWQT V P Y + G FT HN +QG P LA L + + H +I LK + +++ +TTVSP+YAQE++ G GL L ++ GILNG+D WNPA+D + +Y+A L+ + K +R GL S PL ++RL QKG+ L+ A+ R L G Sbjct: 147 PEIIHAHDWQTGLV-PAYLRFAAERTGAKRPVSVFTIHNLAFQGLVPPALLADLDLPPHSFS----IHGLEFHGKIGLLKAGLYYADKLTTVSPTYAQEIQGPAMGFGLDGLLRARARDLSGILNGVDLGLWNPASDPLIPARYDATLLEARQAAKAELRHAFGLGSV-PDGPLFAVVSRLTHQKGIDLVLEALPRLLALG 341
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_BACCZ (Glycogen synthase OS=Bacillus cereus (strain ZK / E33L) GN=glgA PE=3 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 3.894e-26 Identity = 64/191 (33.51%), Postives = 107/191 (56.02%), Query Frame = 3 Query: 6 DIIHCHDWQTAFVAPLYWDLYVPKGL-NSARVCFTCHNFEYQGTAPAKELASCGLDVQQL-NRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIR 572 D++H HDW TA V L + Y L + +T HN ++QG P + + D+ +L + + + +N +KG I+ S+ +T VSP+Y +E++ G+ L L ++ K GI+NGIDT +NP TD+++ QY+A L K ENK +++++ GL + P++ +TRL QKG+ L+R Sbjct: 127 DVLHSHDWHTAMVNFLLREKYQDNPLYEHIKTVYTIHNLQFQGVFPPEVM----YDLLELGDEYFHSEQLEFYGNVNFMKGGIIASDQITAVSPTYKEEIQYEFFGEKLDGLLRKYNDKLSGIVNGIDTSVYNPETDSYITAQYDAGSLYEKNENKRALQRYFGLPEKE-DTPIISMVTRLTKQKGLDLVR 312
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_SYNR3 (Glycogen synthase OS=Synechococcus sp. (strain RCC307) GN=glgA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.086e-26 Identity = 73/199 (36.68%), Postives = 106/199 (53.27%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAK--ELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTL 593 P ++HCHDW T + W P+ FT HN +YQG K + C P MQ + + + A+++++ V VSP+YAQE+RT E G+ L LN+ S K GILNGID +AWNPATD+ + Y+ DL GKA K ++++ +GL + ++G ++RLV QKGV L+ R L Sbjct: 122 PQVLHCHDWHTGMIP--VWMHQDPE----ISTVFTIHNLKYQGPWRWKLERMTWC---------PWYMQGD------HTMAAALLYADRVNAVSPTYAQEIRTPEYGEQLEGLLNYISGKLRGILNGIDVEAWNPATDSRIPATYSTADLSGKAVCKRALQERMGL-QVNPDTFVIGLVSRLVDQKGVDLLLQVAERFL 298 The following BLAST results are available for this feature:
BLAST of CF417459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 360
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417459 ID=CF417459; Name=CF417459; organism=Citrus sinensis; type=EST; length=679bpback to top |