CF417459
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: SSY1_WHEAT (Starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WSSI-2 PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.480e-25 Identity = 73/195 (37.44%), Postives = 101/195 (51.79%), Query Frame = 3 Query: 21 HDWQTAFVAPLYWDLYVPKGL-NSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPD-------RMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAI 581 +DW + V L Y P G+ +R HN +QG PA GL + + R + +N LKGA+V ++ + TVS Y+ EV T+EGGQGL+ L+ GI+NGID + WNP TD L Y+ +DL GKA+ K ++K LGL + PL+G I RL QKG+ LI+ AI Sbjct: 283 NDWHASLVPVLLAAKYRPYGVYRDSRSTLVIHNLAHQGVEPASTYPDLGLPPEWYGALEWVFPEWARRHALDKGEAVNFLKGAVVTADRIVTVSQGYSWEVTTAEGGQGLNELLSSRKSVLNGIVNGIDINDWNPTTDKCLPHHYSVDDLSGKAKCKAELQKELGLPVRE-DVPLIGFIGRLDYQKGIDLIKMAI 476
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_PARDP (Glycogen synthase OS=Paracoccus denitrificans (strain Pd 1222) GN=glgA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.480e-25 Identity = 76/200 (38.00%), Postives = 103/200 (51.50%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 P ++H HDWQ A + P+Y G+ R T HN +QG APA L++ L N P + RI+ LK IVF++ V+TVSP+YA+E+ T E G G+ L + F GILNGID DAW P T QGKA ++ ++RK GL D PL ++RL QKG+ L+ A+ L G Sbjct: 132 PQVLHLHDWQ-AGLTPIYLR---QAGVRDVRTLLTIHNIAFQGLAPAHMLSALQLPAHLFN-PSGFE---YWGRISALKAGIVFADKVSTVSPTYAEELMTPEFGMGMEGVLADRAGDFTGILNGIDLDAWKPPYAT----------PQGKAPHRAALRKEFGLPETDG--PLCVVVSRLTGQKGLDLLIEALPALLENG 311
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_NATTJ (Glycogen synthase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=glgA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.480e-25 Identity = 77/212 (36.32%), Postives = 108/212 (50.94%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPK-GLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAE----NKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAGRTILYFL 623 PDIIH +DW TA V+PL Y K N + T HN +YQG L D+ + H +I+ LKG ++FS+ +TTVSP+YA+E+++ E G G+ L+ GILNGID +NP TD + YN D +GK NK +++ L L +R PL+ I RLV QKG+ LI + + L + FL Sbjct: 127 PDIIHLNDWHTAMVSPLLKYKYAHKTNYNQMKTILTIHNLKYQGIFTPHVLEDF-FDLHDHKLQHDPEYLEYHGQISFLKGGLIFSDAITTVSPTYAKEIQSPELGMGVDGLLHKRRDDLYGILNGIDYQDYNPKTDVNIYRNYNLPD-EGKTNEKLINKLRLQEDLRL-PVSSRVPLIAFINRLVKQKGLDLITYVLPELLESEEVQFVFL 335
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_LACLA (Glycogen synthase OS=Lactococcus lactis subsp. lactis GN=glgA PE=3 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.480e-25 Identity = 70/200 (35.00%), Postives = 108/200 (54.00%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYV-PKGLNSARVCFTCHNFEYQGTAPAKELASC-GLDVQQLNRPDRMQDNSAHD-RINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTL 593 PD++H +DWQTA V L + Y K + T HN E+QG L+ G+ +++ + H+ +N LK I++++ V TVSP+YA+E++TSE G GL S L + K GILNGID D +NP D + ++ +L GK + K ++K GL + PL+G ++RL QKG L+ + + L Sbjct: 129 PDVLHVNDWQTAMVPFLLKEKYNWIKAYEKIKTVLTIHNIEFQGLMHGDALSELFGMGMERY-----FEGVVRHNGMLNMLKTGILYADRVNTVSPTYAKEIQTSEFGCGLESILQYVDGKVSGILNGIDYDIYNPENDILIPYHFSEEELSGKGQMKAELQKRTGL-PLNPNVPLIGMVSRLTNQKGFDLVLSQLEKVL 322
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_EXIS2 (Glycogen synthase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=glgA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.480e-25 Identity = 71/197 (36.04%), Postives = 105/197 (53.30%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVP--KGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDR-INPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDL-QGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAI 581 PD+IHCHDWQT V P + ++ + FT HN +YQG P + L D+ L+ + AH+ +N +K +V +N +TTVSPSY E+ G+ L L + GILNGID ++P TD L Y+ + +GKA NK ++++ LGL + PL G ++RLV QKG+ L+ H + Sbjct: 129 PDVIHCHDWQTG-VLPAFLRIHYQHLNRYQEIKTVFTIHNLQYQGVFPEEVLG----DLLGLSHEHFTAEGIAHNGLVNYMKAGLVHANQITTVSPSYRDEIMDPYYGETLEPVLQHRAVDVRGILNGIDYRQFSPETDEHLVENYDVKTVEEGKAANKAALQQELGL-PVNPDVPLFGFVSRLVDQKGIDLLAHIL 319
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_CLOPH (Glycogen synthase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=glgA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.480e-25 Identity = 67/191 (35.08%), Postives = 103/191 (53.93%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGL-NSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNA-NDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLI 569 PDIIHCHDWQT V D + + + T HN ++QG K + + PD+++ + N LKG IVFS+ +TTVS +YA ++ G+GL + S GI+NGID + +NP D F+ YNA N + K +NK ++++ LGL+ D + ++G ++RL+ Q G+ LI Sbjct: 128 PDIIHCHDWQTGLVPVFLHDSFQKNEFYHGIKTIMTIHNLKFQGVWDKKTVQDITALSEYYFSPDKLE---TYGDANYLKGGIVFSDYITTVSDTYAHDITMPFYGEGLDGLMRARSDCLCGIVNGIDYEEYNPEFDPFINKPYNAKNFRKEKIKNKRALQQELGLAK-DDKAFMIGIVSRLIDQNGLDLI 314
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_MAGSA (Glycogen synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=glgA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.933e-25 Identity = 72/204 (35.29%), Postives = 103/204 (50.49%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSA-DARKPLVGCITRLVPQKGVHLIRHAIYRTLGAGRTI 611 P ++H +DWQT +AP Y + P FT HN YQG P + G + M +D ++ LK + +S+ +TTVSP YA+E++T G G+ L + GILNG D + WNPA DT L + D GKA NK +++ LGLS A DA PL+ ++RL KG+ L+ A+ L G + Sbjct: 136 PQVLHANDWQTG-LAPAYLHAWSPA--QRPATVFTIHNIAYQGQFPRDLVPRLGFPPEMY----AMDGFEYYDTLSFLKSGLFYSDRITTVSPRYAKEIQTPAFGCGMEGLLAHRAADLTGILNGADYEVWNPAADTHLDHAFTPGDAAGKACNKAALQAELGLSQAPDA--PLMVIVSRLNDHKGMDLVLAALPNILKMGAQV 330
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_PROMT (Glycogen synthase OS=Prochlorococcus marinus (strain NATL2A) GN=glgA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.524e-25 Identity = 69/199 (34.67%), Postives = 107/199 (53.77%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAK--ELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTL 593 P ++HCHDW T + W P+ FT HN +YQG K ++ C P M + + + A+++++ V VSP+Y++E+RTSE G+ L LN+ S K GILNG+D D WNPATD L +++ +++ G+A NK +++ +GL + K L+G + RLV QKG+ L+ R L Sbjct: 122 PQVLHCHDWHTGMIP--VWMHQDPE----ISTVFTIHNLKYQGPWRWKLDQITWC---------PWYMHGD------HTMASAMLYADRVNAVSPTYSREIRTSEYGEKLEGLLNYISGKLRGILNGVDLDEWNPATDNSLPAKFSVDNISGRAINKRVLQERMGL-EVNPDKYLMGMVGRLVDQKGIDLLLQVANRLL 298
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_PROMS (Glycogen synthase OS=Prochlorococcus marinus (strain AS9601) GN=glgA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.524e-25 Identity = 69/199 (34.67%), Postives = 107/199 (53.77%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAK--ELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTL 593 P ++HCHDW T + W P+ FT HN +YQG K ++ C P M + + + A+++++ V VSP+YA E++T E G+ L LN+ S K GILNGID D WNPA D L +++ +L+ + ENK+ +++ +GL +++K L+G ++RLV QKGV L+ R L Sbjct: 122 PQVLHCHDWHTGMIP--VWMHQDPE----ISTVFTIHNLKYQGPWRWKLEKMTWC---------PWYMHGD------HTMAAAMLYADRVNAVSPTYADEIKTHEYGESLEGLLNYISGKLRGILNGIDLDEWNPAKDPVLPAKFSIKNLENRLENKKILQREMGL-EVNSKKYLLGMVSRLVDQKGVDLLLQVSRRLL 298
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_PROM2 (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9215) GN=glgA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.524e-25 Identity = 69/199 (34.67%), Postives = 107/199 (53.77%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAK--ELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTL 593 P ++HCHDW T + W P+ FT HN +YQG K ++ C P M + + + A+++++ V VSP+YA E++T E G+ L LN+ S K GILNGID D WNPA D L +++ +L+ + ENK+ +++ +GL +++K L+G ++RLV QKGV L+ R L Sbjct: 122 PQVLHCHDWHTGMIP--VWMHQDPE----ISTVFTIHNLKYQGPWRWKLEKMTWC---------PWYMHGD------HTMAAAMLYADRVNAVSPTYADEIKTHEYGESLEGLLNYISGKLRGILNGIDLDEWNPAKDPVLPAKFSIKNLENRLENKKILQREMGL-EVNSKKYLLGMVSRLVDQKGVDLLLQVSRRLL 298 The following BLAST results are available for this feature:
BLAST of CF417459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 360
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417459 ID=CF417459; Name=CF417459; organism=Citrus sinensis; type=EST; length=679bpback to top |