CF417459
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_LACCB (Glycogen synthase OS=Lactobacillus casei (strain BL23) GN=glgA PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.293e-29 Identity = 78/195 (40.00%), Postives = 113/195 (57.95%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYV-PKGLNSARVCFTCHNFEYQGTAPAKELASC-GLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAI 581 PD+IH +DW TAF+ L + Y K + T HN ++QG P LA+ G+ + N QD S IN LKG I ++++V+TVSPSYA+E++T G+ L TL S K VGILNGID++ +NPATD L Y+A +L GKA++K++++ + L PL ++RL QKG L+ A+ Sbjct: 128 PDVIHANDWHTAFIPVLLKEKYGWIKPYQQIKTQLTIHNLQFQGWFPPSTLATVFGIGREGFNDDGFGQDGS----INWLKGGINYADLVSTVSPSYAKEIQTPAFGEHLDGTLRKQSGKLVGILNGIDSEVYNPATDQNLAYNYDAKNLAGKAKDKKALQDEMHLPK--RTDPLFAMVSRLTRQKGADLLVDAL 316
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_LACC3 (Glycogen synthase OS=Lactobacillus casei (strain ATCC 334) GN=glgA PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.293e-29 Identity = 78/195 (40.00%), Postives = 113/195 (57.95%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYV-PKGLNSARVCFTCHNFEYQGTAPAKELASC-GLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAI 581 PD+IH +DW TAF+ L + Y K + T HN ++QG P LA+ G+ + N QD S IN LKG I ++++V+TVSPSYA+E++T G+ L TL S K VGILNGID++ +NPATD L Y+A +L GKA++K++++ + L PL ++RL QKG L+ A+ Sbjct: 128 PDVIHANDWHTAFIPVLLKEKYGWIKPYQQIKTQLTIHNLQFQGWFPPSTLATVFGIGREGFNDDGFGQDGS----INWLKGGINYADLVSTVSPSYAKEIQTPAFGEHLDGTLRKQSGKLVGILNGIDSEVYNPATDQNLAYNYDAKNLAGKAKDKKALQDEMHLPK--RTDPLFAMVSRLTRQKGADLLVDAL 316
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_STRE4 (Glycogen synthase OS=Streptococcus equi subsp. equi (strain 4047) GN=glgA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.689e-29 Identity = 76/192 (39.58%), Postives = 110/192 (57.29%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYV-PKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSA--HDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLI 569 PDI+H HD+ TA + L + Y + + R FT HN +QG L DV +R +D + HD +N +K A+++++ VTTVSPSYA E++T GQGL + + K GI+NGIDTD +NPA D L ++A DL GKA K+++++ LGL A PL+G ++RL QKG L+ Sbjct: 126 PDILHVHDYHTAMIPFLLKEKYHWIQAYQAIRTVFTIHNIAFQGQFDPGMLGDL-FDVGI----ERYEDGTLRWHDCLNWMKAAVLYADRVTTVSPSYAHEIQTPAFGQGLDQVMRMEAGKLSGIVNGIDTDLFNPARDPHLPASFSAEDLSGKAATKQALQERLGL-PVRADVPLIGMVSRLTDQKGFQLV 311
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_THEM4 (Glycogen synthase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=glgA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.881e-29 Identity = 73/193 (37.82%), Postives = 107/193 (55.44%), Query Frame = 3 Query: 6 DIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCF-TCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAI 581 D++H +DWQT+ + LY + V T HN YQG +K + GL N + + +IN LKG I++S+I+ TVSP+YA E++T E G+ L L S G+LNGID D +NP TD + V Y+ +++ K ENK ++K LGL D R P++G ITRLV QKG+ ++ + Sbjct: 129 DVLHVNDWQTSLIPVYLKTLYKEDEFYAKTVTLLTIHNLGYQGIFDSKYMEFSGLPNYLYN----IDGIEFYGKINFLKGGILYSDIINTVSPTYANEIQTKEYGEKLDGVLRLRSADLYGVLNGIDYDEYNPETDKRIFVNYSLDNIDKKYENKVRLQKELGLPE-DRRIPMIGMITRLVDQKGLDILSEVL 316
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_THISH (Glycogen synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=glgA PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.915e-29 Identity = 77/204 (37.75%), Postives = 110/204 (53.92%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAGRTIL 614 PD++HC+DWQ A +APL ++ + FT HN YQG P + L Q + Q H +++ +KG I F++ +TTVSPSYA+E+ T + G GL LN + GILNG+D W+P D L +Y+A+DL GKA K +++ H L + PL+G + R+V QKGV L+ A L AG L Sbjct: 136 PDVVHCNDWQ-AGLAPLMLSMHESR----PATVFTIHNLAYQGLFPRHAFDALNLPPQLWH----YQGLEFHGKLSFIKGGIGFADHITTVSPSYAREILTPQQGFGLDGLLNHRAGVLTGILNGVDYREWDPGKDRHLVARYSADDLSGKARCKAALQHHFKL-PCHSGIPLLGHVGRMVAQKGVDLLLKAAEPLLAAGEAQL 329
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_STRS7 (Glycogen synthase OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=glgA PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.915e-29 Identity = 75/193 (38.86%), Postives = 109/193 (56.48%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYV-PKGLNSARVCFTCHNFEYQGTAPAKELASC-GLDVQQLNRPDRMQDNSA--HDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLI 569 PDI+H HD+ TA + L + Y + + R FT HN +QG L G+ + R +D + HD +N +K A+++++ VTTVSPSYA E++T GQGL + + K GI+NGIDTD +NPA D L ++A DL GKA K+ +++ LGL A PL+G ++RL QKG L+ Sbjct: 126 PDILHVHDYHTAMIPFLLKEKYHWIQAYQAIRTVFTIHNIAFQGQFDPGMLGDLFGVGI------GRYEDGTLRWHDCLNWMKAAVLYADRVTTVSPSYAHEIQTPAFGQGLDQVMRMEAGKLSGIVNGIDTDLFNPARDPHLPASFSAEDLSGKAATKQVLQERLGL-PVRADVPLIGMVSRLTDQKGFQLV 311
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_CELJU (Glycogen synthase OS=Cellvibrio japonicus (strain Ueda107) GN=glgA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.419e-29 Identity = 73/192 (38.02%), Postives = 105/192 (54.69%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSA---HDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLI 569 PDI+HC+DWQT + P L+ + FT HN Y+G + +LN P + + +++ +KG + F++ +TTVSPSYAQE++ E G GL + + + GILNGIDTD WNP D L YN L K +NK ++++ LGL + +A PL+G I RLV QKG+ LI Sbjct: 136 PDIVHCNDWQTGLI-PALLSLHPER----PATLFTIHNLAYRGLFSYQAFG-------ELNLPPAFWHHERLEFYGQMSFMKGGLAFADFITTVSPSYAQEIQLPEHGYGLDGLIRYRQESLSGILNGIDTDEWNPGKDKHLAATYNRRTLGNKTKNKLALQETLGL-ALNADVPLLGFIGRLVDQKGIDLI 314
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_AZOSE (Glycogen synthase OS=Azoarcus sp. (strain EbN1) GN=glgA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.419e-29 Identity = 72/192 (37.50%), Postives = 107/192 (55.73%), Query Frame = 3 Query: 6 DIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAI 581 DI+HC+DW TA +AP Y L +P +A HN +QG P GL + L + + +++ LK + +++ + VSP+YA+E+RT G G+ L + + GILNGID DAWNP TD L Y+A+ L+ KA NK +++ LGL +AD L+G +TRL QKG+ L+ A+ Sbjct: 144 DILHCNDWPTA-LAPAYLKLGLP---GAAPSLIVVHNLAFQGIFPLDVAERLGLPPESL----KSEGVEYWGKLSFLKAGLYYADRIVAVSPTYAREIRTEAHGCGMQGLLETRANRLAGILNGIDMDAWNPRTDPHLDTNYDADTLEDKAPNKRALQAELGL-AADDDALLLGMVTRLTDQKGIDLVLDAL 326
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_STRMU (Glycogen synthase OS=Streptococcus mutans GN=glgA PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.384e-29 Identity = 74/195 (37.95%), Postives = 114/195 (58.46%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYV-PKGLNSARVCFTCHNFEYQGT---APAKELASCGLDVQQLNRPDRMQDNSA--HDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLI 569 PDI+H HD+ TA + L + Y + + FT HN E+QG + EL G +R +D + +D +N +K A+++++ VTTVSPSYA+E+ T E G+GL + S K G++NGIDTD ++P TD L V ++ +DL GKA+NK ++++ +GL + PLVG ++RL QKG L+ Sbjct: 126 PDILHVHDYHTAMIPYLLKEKYHWINAYHGIKTVFTIHNIEFQGQFNPSMLGELFGVG--------DERYRDGTLRWNDCLNWMKAAVLYADRVTTVSPSYAKEIMTPEFGKGLDQIMRMESGKLSGVVNGIDTDLFDPETDPHLAVHFSKDDLSGKAKNKAALQERVGLPVRE-DVPLVGIVSRLTDQKGFQLV 311
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_HYDS0 (Glycogen synthase OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=glgA PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.384e-29 Identity = 83/207 (40.10%), Postives = 117/207 (56.52%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFV-GILNGIDTDAWNPATDTFLKVQYNANDLQ-GKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAGRTILY 617 PDIIH HDW TA VA +Y DLY K L+ T HN +QG L G+ N +D ++++N LKG IV S+++TTVS ++A+E++T+ G GL L K++V GILNGIDT++WNPATD L Y+ N + GK +NK +++ GL + R PL I RL QKG+ LI A+ + G ++ Sbjct: 128 PDIIHIHDWHTALVA-VYKDLYF-KHLDETATVLTIHNIAFQGIFLGHILPQIGIPWGLFNP----EDLEFYNQVNFLKGGIVHSDVITTVSKTHAKEIQTNMGF-GLEGVLR--EKRYVFGILNGIDTESWNPATDKSLYQNYDINTFKAGKEKNKMYVKELFGLETPHTR-PLAAFIARLAKQKGLDLIEKAVDDAVKIGYDFIF 324 The following BLAST results are available for this feature:
BLAST of CF417459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 360
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417459 ID=CF417459; Name=CF417459; organism=Citrus sinensis; type=EST; length=679bpback to top |