CF417459
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_XANC5 (Glycogen synthase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=glgA PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.585e-19 Identity = 66/205 (32.20%), Postives = 101/205 (49.27%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKK--FVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAGRTI 611 P ++H +DW A A YV + T HN YQG P A+ G+ + R+ + + +++ L+G IV ++ V TVS SYA+++ G GL L + K GI+NGID +W+P TD +L ++ N QG+ N +RK GL ++ PL ++RLV QKG+ LI + + AG I Sbjct: 165 PRLLHLNDWPCALAAG-----YVRWSGGTTPCLLTIHNLAYQGLVPYSMAAALGIPAE------RVAELEFYGQMSFLRGGIVNADHVNTVSVSYAKQITGPAQGCGLDRLLAGRAAKGALTGIVNGIDA-SWDPRTDEYLDSHFSVNQWQGRQANAAQVRKAFGL--RESTGPLFAVVSRLVHQKGLDLICEVAPQIVAAGGQI 355
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_XANAC (Glycogen synthase OS=Xanthomonas axonopodis pv. citri GN=glgA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.585e-19 Identity = 66/205 (32.20%), Postives = 101/205 (49.27%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKK--FVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAGRTI 611 P ++H +DW A A YV + T HN YQG P A+ G+ + R+ + + +++ L+G IV ++ V TVS SYA+++ G GL L + K GI+NGID +W+P TD +L ++ N QG+ N +RK GL ++ PL ++RLV QKG+ LI + + AG I Sbjct: 130 PRLLHLNDWPCALAAG-----YVRWSGGTTPCLLTIHNLAYQGLVPYSMAAALGIPAE------RVAELEFYGQMSFLRGGIVNADHVNTVSVSYAKQITGPAQGCGLDRLLAGRAAKGALTGIVNGIDA-SWDPRTDQYLDSHFSVNQWQGRQANAAQVRKAFGL--RESAGPLFAVVSRLVHQKGLDLICEVAPQIVAAGGQI 320
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA2_RHIME (Glycogen synthase 2 OS=Rhizobium meliloti GN=glgA2 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.585e-19 Identity = 61/205 (29.76%), Postives = 98/205 (47.80%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVP-KGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAGRTIL 614 P IIH HDW A LY+ G ++ T HN +QG PA GL + + + + I LKG + ++ +T VSP+YA+E+ + G GL +N VGI+NGID + W+P++D ++ Y+A + N++ + +H GL D P+ + RL QKG+ L+ + G T++ Sbjct: 131 PHIIHAHDWHAAMSL-----LYLKYAGDDTIPRVLTVHNLAFQGQFPAHYFPELGLPAEAYS----IDGVEYYGDIGFLKGGLQAADAITVVSPTYAREIMSPAFGMGLEGVMNERHADVVGIVNGIDLEVWDPSSDPCIEHHYSARVPLRRLPNRQVLLRHFGL--PDTCGPIFASVNRLTWQKGMDLLAATAGEIVKNGGTLI 324
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_XANOR (Glycogen synthase OS=Xanthomonas oryzae pv. oryzae GN=glgA PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.070e-19 Identity = 65/205 (31.71%), Postives = 101/205 (49.27%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKK--FVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAGRTI 611 P ++H +DW A A YV + T HN YQG P + G+ + R+ + + +++ L+G IV ++ V TVS SYA+++ G GL L + K GI+NGID +W+P TD +L ++ N QG+ +N +RK GL ++ PL ++RLV QKG+ LI + + AG I Sbjct: 165 PRLLHLNDWPCALAAG-----YVRWSGGTTPCLLTIHNLAYQGLVPYSMAGALGIPAE------RVAELEFYGQMSFLRGGIVNADHVNTVSVSYAKQITGPAQGCGLDRLLAGRAAKGALTGIVNGIDA-SWDPRTDEYLDSHFSVNQWQGRQDNAAQVRKAFGL--RESTGPLFAVVSRLVHQKGLDLICEVAPQIVAAGGQI 355
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_XANOM (Glycogen synthase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=glgA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.070e-19 Identity = 65/205 (31.71%), Postives = 101/205 (49.27%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKK--FVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAGRTI 611 P ++H +DW A A YV + T HN YQG P + G+ + R+ + + +++ L+G IV ++ V TVS SYA+++ G GL L + K GI+NGID +W+P TD +L ++ N QG+ +N +RK GL ++ PL ++RLV QKG+ LI + + AG I Sbjct: 165 PRLLHLNDWPCALAAG-----YVRWSGGTTPCLLTIHNLAYQGLVPYSMAGALGIPAE------RVAELEFYGQMSFLRGGIVNADHVNTVSVSYAKQITGPAQGCGLDRLLAGRAAKGALTGIVNGIDA-SWDPRTDEYLDSHFSVNQWQGRQDNAAQVRKAFGL--RESTGPLFAVVSRLVHQKGLDLICEVAPQIVAAGGQI 355
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_HAEIN (Glycogen synthase OS=Haemophilus influenzae GN=glgA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.070e-19 Identity = 61/191 (31.94%), Postives = 92/191 (48.17%), Query Frame = 3 Query: 6 DIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSE---GGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLI 569 +++H HDW ++ P A+ FT HN YQG L GL + ++ +I+ LK + +S+ T VSP+YAQE+ T E G QGL S L + VGILNG+D + W+P D ++ Y + GK +NK ++ + L ++ V +TRL QKGV L+ Sbjct: 131 EVVHAHDWHAGLCVAYLFNKGKP-----AKSVFTIHNLAYQGQFSYHHLYEIGLPTGMFH----VEGLELFGQISYLKSGLFYSDASTAVSPTYAQEITTPEFAYGLQGLLSGLKAQGR-LVGILNGVDENIWHPNVDQYIPHHYKLKYMAGKKKNKAELQAYFNLPQDESALAFV-MVTRLTEQKGVDLL 310
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_HAEI8 (Glycogen synthase OS=Haemophilus influenzae (strain 86-028NP) GN=glgA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.070e-19 Identity = 61/191 (31.94%), Postives = 93/191 (48.69%), Query Frame = 3 Query: 6 DIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSE---GGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLI 569 +++H HDW A ++ P A+ FT HN YQG L GL + ++ +I+ LK + +S+ T VSP+YA+E+ T E G QGL S L + VGILNG+D + W+P D ++ Y + GK +NK ++ + L ++ V +TRL QKGV L+ Sbjct: 131 EVVHAHDWHAGLCAAYLFNKGRP-----AKSVFTIHNLAYQGQFSYHHLYEIGLPTGMFH----VEGLELFGQISYLKSGLFYSDASTAVSPTYAEEITTPEFAYGLQGLLSGLKAQGR-LVGILNGVDENIWHPNVDQYIPHHYKLKYMAGKKKNKAELQAYFNLPQDESALAFV-MVTRLTEQKGVDLL 310
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_AERS4 (Glycogen synthase OS=Aeromonas salmonicida (strain A449) GN=glgA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.070e-19 Identity = 57/190 (30.00%), Postives = 95/190 (50.00%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGL-NSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLI 569 P+I+HC+DW T + L + R + HN +QG ++ + + + R+ + H +N LK +++++ + VSP+YA E+ T G G+ + + GILNG D W+PA D FL Y+ ++L GK K+++++ GL D P+ G + RL QKGVHL+ Sbjct: 136 PEIVHCNDWHTGLLPLLLKTRHAHNPFFQHTRSVISIHNAAFQGVFGREQFWAMP---EIADYEQRISYDYGH--VNLLKCGVLYADKINAVSPNYASELLTHLGAHGMANIFQQRAADLRGILNGCDYKDWDPAFDDFLPATYDVDNLAGKRVCKQTLQQEAGLPVTDL--PIYGMVCRLTEQKGVHLL 318
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: SSY22_ORYSJ (Soluble starch synthase 2-2, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-2 PE=2 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19 Identity = 64/194 (32.99%), Postives = 93/194 (47.94%), Query Frame = 3 Query: 21 HDWQTAFVAPLYWDLYVPKG--LNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDL-----QGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAI 581 +DW TA + P+Y Y + R HN +QG P + A+ L ++ R+ D + N + ++ TVS Y E++T +GG GLH +N + K GI+NGID WNP D L+ AN GK + KE++++ LGL D PL+G I RL QKGV +I A+ Sbjct: 340 NDWHTALL-PVYLKAYYRDNGLMQYTRSVLVIHNIAHQGRGPVDDFATMDLPEHYIDH-FRLYDPVGGEHSNVFAAGLKMADRAVTVSHGYLWEIKTMDGGWGLHEIINHNDWKLQGIVNGIDMAEWNPEVDEHLQSDGYANYTFETLDTGKKQCKEALQRQLGLQVRD-DVPLIGFIGRLDHQKGVDIIGDAM 530
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_PSEPF (Glycogen synthase OS=Pseudomonas fluorescens (strain Pf0-1) GN=glgA PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19 Identity = 65/190 (34.21%), Postives = 99/190 (52.11%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKK--FVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHL 566 PD++H HDW A +AP Y +G + + FT HN YQG G+ L + + + +++ LK + +S+ +TTVS +YAQE+ T + G GL L +++ GI NGID ++W+ ATD L + D +GKA N +R+ GL D+ PL ++RLV QKG+ L Sbjct: 141 PDLVHAHDWP-AGLAPAYMHW---RGQRTPTL-FTIHNLAYQGVTSLGSCPELGIPAHALQQ----EGMEFYGKMSFLKAGMAYSSHITTVSATYAQEITTPDFGCGLDGFLAAKTQQGLLSGIPNGID-ESWDAATDPHLFAPFAIGDWEGKAINAAHVRELFGLK--DSEGPLFAVVSRLVYQKGLDL 318 The following BLAST results are available for this feature:
BLAST of CF417459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 360
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417459 ID=CF417459; Name=CF417459; organism=Citrus sinensis; type=EST; length=679bpback to top |