CF417459
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_SYNS9 (Glycogen synthase OS=Synechococcus sp. (strain CC9902) GN=glgA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.161e-28 Identity = 79/199 (39.70%), Postives = 107/199 (53.77%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAK--ELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTL 593 P ++HCHDW T + W P+ FT HN +YQG K + C P MQ + + + A++ ++ V VSP+YAQE+RT+E G+ LH LNF S K GILNGID +AW+PATD L Y+A DL GKA K+ +++ +GL D L+G +TRLV QKGV L+ R L Sbjct: 122 PQVLHCHDWHTGMIP--VWMHQDPE----ISTVFTIHNLKYQGPWRWKLDRITWC---------PWYMQGD------HTMAAALINADRVNAVSPTYAQEIRTAEYGENLHGLLNFVSGKLRGILNGIDLEAWDPATDKALPANYSAADLTGKAVCKQVLQERMGLEVRDDAF-LLGMVTRLVDQKGVDLLLQVADRLL 298
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_GRABC (Glycogen synthase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=glgA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.161e-28 Identity = 72/195 (36.92%), Postives = 106/195 (54.36%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSA--HDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAI 581 PDI+H HDWQ V P Y L + + V FT HN +QG P LA+ L PD + + +I LK + +++ +TTVSPSYA+E++T GG GL L + G+LNGID WNPA D +K ++ + L+ + N+E++R GL S+ PL G ++RL QKG+ L+ +A+ Sbjct: 131 PDIVHAHDWQAGLV-PAY--LALSEASPRPPVLFTIHNLAFQGVVPRDRLAALLLP------PDSFSVDGVEYYGQIGLLKAGLHYADALTTVSPSYAREIQTDTGGMGLGGLLRDRAAVLNGLLNGIDMTEWNPAHDPHVKAHFDRHSLEHRTINREALRTRFGLDSSAG--PLFGIVSRLTGQKGIDLVLNAL 314
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPA (Glycogen synthase OS=Rhodopseudomonas palustris GN=glgA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.434e-28 Identity = 71/200 (35.50%), Postives = 103/200 (51.50%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 PD++H HDWQT + P Y G + FT HN +QG P + L GL R + + I LK + ++ +TTVSP+YA E++ SE G GL L + + GILNGIDTD WNPA+D + Y+ + +A NK+ ++ GL + L G I+RL QKG+ L+ A+ + +G G Sbjct: 134 PDVLHAHDWQTGLL-PAYLKY---SGRPGPKTVFTIHNLAFQGRFPYELLGRLGLP----ERAFGLDGIEYYGGIGYLKAGLQLADRITTVSPTYAAEIQGSEAGMGLDGLLRLRADRLSGILNGIDTDVWNPASDALISATYDVESIAARARNKKVLQARFGL-KPEPGALLYGVISRLSWQKGLDLLLEALPQLIGGG 324
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_FINM2 (Glycogen synthase OS=Finegoldia magna (strain ATCC 29328) GN=glgA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.434e-28 Identity = 75/193 (38.86%), Postives = 106/193 (54.92%), Query Frame = 3 Query: 6 DIIHCHDWQTAFVAPLYWDLYVPKG---LNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRH 575 DIIH +DW TA V D KG S + FT HN +YQG + L L D ++ +D IN +KGAIVFS+ VTTVS +YA E++ S G+GL + + K GI NGIDT WNP TD +L Y+ +++ K ENK+++++ GL + P+ +TRLV KG+ L+R+ Sbjct: 127 DIIHSNDWHTAMVNVYARDF--AKGDPFYESIKTVFTIHNLKYQGVFSSNSLRQTDLSPMYFTE-DALK---FYDAINFMKGAIVFSDRVTTVSKTYADEIKYSFFGEGLDGVIRQYHYKISGITNGIDTTIWNPETDKYLFKNYSLKNIKDKDENKKALQRMYGLEEKNV--PVFAMVTRLVENKGLELVRY 311
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_ACICJ (Glycogen synthase OS=Acidiphilium cryptum (strain JF-5) GN=glgA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.434e-28 Identity = 77/206 (37.38%), Postives = 105/206 (50.97%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHA--IYRTLGAGRTIL 614 PD++H HDWQ V P Y +G + FT HN +QG PA L + GL + I LK + F++ +TTVSP YA E+ T +GG GL L GILNG+DT WNPATD L +Y+ +L +A NK +++ +GL + D R L G ++RL QKG+ LI A + LGA +L Sbjct: 131 PDLLHAHDWQAGLV-PAYLHY---EGHAAPPCVFTVHNLAFQGWFPAHLLGALGLPASAFV----IDGVEYFGGIGFLKAGLQFADAITTVSPRYATEIATQDGGMGLDGLLRKRGSAVHGILNGLDTATWNPATDEHLAARYDVANLAARAVNKRAVQARMGL-APDPRALLFGVVSRLAGQKGIDLIIEALPVLDALGAQLAVL 327
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_ALHEH (Glycogen synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=glgA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.097e-28 Identity = 74/200 (37.00%), Postives = 106/200 (53.00%), Query Frame = 3 Query: 9 IIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGL--SSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 ++H HDWQTA L VP+ FT HN Y+G PA+ GL + P+ ++ H R+ +KG + +++ +TTVSP+YA+E++T G GL L S GI+NGIDT WNPA D L Y D +A N+ ++ + +GL + + PL+G + RLV QKGV LI A+ R L G Sbjct: 134 VLHAHDWQTALAPFLLQRRPVPR----PATVFTIHNLAYRGLFPAETHTRLGLPPEAWT-PEGLE---FHGRLAFIKGGLAYADAITTVSPTYAREIQTPAFGCGLDGLLRHRSGVLHGIVNGIDTTVWNPAADPHLAACYRKPDPAARAANRAALAQRIGLDGDTGERSGPLLGFVGRLVEQKGVDLILAALPRLLAGG 325
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_NITEC (Glycogen synthase OS=Nitrosomonas eutropha (strain C91) GN=glgA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.269e-28 Identity = 71/185 (38.38%), Postives = 106/185 (57.30%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKG 557 PDI+HC+DWQ+ + P Y L+ G +A + T HN +QG P+ E+A GL + + M + ++ LK I +S+ ++TVSP YA+E++ G GL L S GI+NGIDT WNPATD +L +Y + +L KA NK ++++ +GL + A PL G ++RL QKG Sbjct: 147 PDIVHCNDWQSG-LTPAY--LHFHSGKKAASL-ITLHNLAFQGNFPSDEVAKLGLPDESFS----MHGAEFYGNLSFLKAGIYYSDHISTVSPGYAREIQQEPLGFGLQGLLAKRSDDITGIVNGIDTAIWNPATDPYLVKKYTSRNLSAKAANKLALQQTMGLENNQA-IPLFGTVSRLTHQKG 322
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_HELMI (Glycogen synthase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=glgA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.269e-28 Identity = 76/200 (38.00%), Postives = 114/200 (57.00%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYV--PKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHL---IRHAIYR 587 PDI+H +DWQ L + Y P A V T HN EYQG L GL Q L RPD ++ + ++N +K +VF++++ TVS +YA+E++TSE G GL L GI+NGID + ++PATD + Y+A++++GK NK +++ GL ++A PL+G + RLV QKG+ L I A++R Sbjct: 132 PDILHFNDWQCGPAIALLKEEYRHHPAYRRIASV-LTVHNLEYQGHFGRDILQFIGLR-QDLFRPDALE---FYGQVNFMKAGLVFADLINTVSRTYAEEIQTSEYGWGLDGLLRLRHSDLFGIVNGIDVEVYDPATDPHIPHHYSADNIEGKKRNKAELQRQFGLPVSEA--PLLGLVHRLVDQKGIDLFEGIEEALFR 324
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_ANASK (Glycogen synthase OS=Anaeromyxobacter sp. (strain K) GN=glgA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.269e-28 Identity = 71/194 (36.60%), Postives = 104/194 (53.61%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYV-PKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAI 581 P I+H +DWQ L + L AR FT HN YQG P + L + GL + R + D+++ +K + F++ +TTVSP+YA+E+ T EGG L + L ++ GILNGID AW+PA D L + A DL GKA K ++++ +GL P+ G +TRL QKG+ L+ A+ Sbjct: 127 PRILHLNDWQCGLGPWLLRHEHARDPALAGARTVFTIHNLAYQGLFPKQVLPALGLPWEVF----RWEAMEFFDQLSFMKAGLAFADALTTVSPTYAREILTPEGGASLDALLRHRARDLHGILNGIDVHAWDPARDPHLPAHFTAGDLAGKAACKAALQREVGL-PVRPEVPVAGLVTRLAEQKGIDLVAAAL 315
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_ANAD2 (Glycogen synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=glgA PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.269e-28 Identity = 71/194 (36.60%), Postives = 104/194 (53.61%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYV-PKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAI 581 P I+H +DWQ L + L AR FT HN YQG P + L + GL + R + D+++ +K + F++ +TTVSP+YA+E+ T EGG L + L ++ GILNGID AW+PA D L + A DL GKA K ++++ +GL P+ G +TRL QKG+ L+ A+ Sbjct: 127 PRILHLNDWQCGLGPWLLRHEHARDPALAGARTVFTIHNLAYQGLFPKQVLPALGLPWEVF----RWEAMEFFDQLSFMKAGLAFADALTTVSPTYAREILTPEGGASLDALLRHRARDLHGILNGIDVHAWDPARDPHLPAHFGAGDLTGKAACKAALQREVGL-PVRPEVPVAGLVTRLAEQKGIDLVAAAL 315 The following BLAST results are available for this feature:
BLAST of CF417459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 360
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417459 ID=CF417459; Name=CF417459; organism=Citrus sinensis; type=EST; length=679bpback to top |