CF417459
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_LEPCP (Glycogen synthase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=glgA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.211e-27 Identity = 67/193 (34.72%), Postives = 100/193 (51.81%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAI 581 P ++H HDW A L +G A +T HN YQG PA GL +++ + +I+ +KG + F++ +TTVSP+YA+E++ +E G GL L GILNG+D WNPA D + Y L GKA+ K +++ LGL+ D PL+ ++RL QKG+HL+ A+ Sbjct: 137 PRVVHAHDWHAALAPAYLRALEWARGRRLAGSVYTVHNLAYQGFFPAHHFGDLGLPAAY----NQVHGLEFYGQISFMKGGLYFADRITTVSPTYAREIQGAEQGCGLDGLLRDRDADLSGILNGVDDAVWNPAGDALIPATYTRRKLTGKAQCKATLQAELGLAE-DPAVPLLCVVSRLTEQKGLHLVLQAL 324
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_ACIAC (Glycogen synthase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=glgA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.211e-27 Identity = 73/203 (35.96%), Postives = 112/203 (55.17%), Query Frame = 3 Query: 6 DIIHCHDWQTAFVAPLYW----DLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 DI+H +DW TA +APLY D P+G AR T HN +QG P G++ + L ++ +++ LK + +++ +TTVSP+YA+E++T E G GL L + + GILNGIDT WNP+ DT + ++A+ L+GKA K ++R+ LGL+ D + L G + R+ QKG+ + R L G Sbjct: 134 DIVHANDWPTA-LAPLYLRQFRDAAGPRGDAVARSMVTVHNLAFQGVFPMDWAQRLGIEDRHLG----IEGAEFWGQLSMLKAGLQYADAITTVSPTYAREIQTPELGFGLDGVLRARAGRLQGILNGIDTALWNPSQDTLIPAPFSADRLEGKAACKAALRRTLGLAQ-DGDRMLFGLVGRMTEQKGIDWVIGGAERLLRQG 330
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_THET8 (Glycogen synthase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=glgA PE=3 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.581e-27 Identity = 76/200 (38.00%), Postives = 105/200 (52.50%), Query Frame = 3 Query: 6 DIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTA-PAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 D++H HDW A +A LY P +T HN +QG P + GL + M+ + R+N +KG IVF+ VTTVSPSYA+E++T E G GL L H+ K GILNG+DT+ ++P D +L Y D GKA KE+ R+ GL R P++ + RL QKG+ L+ A+ R L G Sbjct: 116 DLVHAHDWTAALLA-----LYAP-------TVYTIHNLAHQGLVDPGLFFSWTGLPWSLFH----MEALEFYGRVNLMKGGIVFARRVTTVSPSYAEEIQTPEFGMGLDGVLRRHAGKLRGILNGLDTEVFDPGKDPYLPAPYTREDPSGKARAKEAFRERTGL-----RPPVLAYVGRLDYQKGLDLVLKALPRLLEMG 294
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_THET2 (Glycogen synthase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=glgA PE=3 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.581e-27 Identity = 76/200 (38.00%), Postives = 105/200 (52.50%), Query Frame = 3 Query: 6 DIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTA-PAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 D++H HDW A +A LY P +T HN +QG P + GL + M+ + R+N +KG IVF+ VTTVSPSYA+E++T E G GL L H+ K GILNG+DT+ ++P D +L Y D GKA KE+ R+ GL R P++ + RL QKG+ L+ A+ R L G Sbjct: 116 DLVHAHDWTAALLA-----LYAP-------TVYTIHNLAHQGLVDPGLFFSWTGLPWSLFH----MEALEFYGRVNLMKGGIVFARRVTTVSPSYAEEIQTPEFGMGLDGVLRRHAGKLRGILNGLDTEVFDPGKDPYLPAPYTREDPSGKARAKEAFRERTGL-----RPPVLAYVGRLDYQKGLDLVLKALPRLLEMG 294
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_KOSOT (Glycogen synthase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=glgA PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.581e-27 Identity = 77/197 (39.09%), Postives = 106/197 (53.81%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTL 593 PD++H +DWQ A + Y K + T HN YQG GL ++L + + N A N LK IV + ++TVSP+YA+E++T E G GL TL S + GILNGID +NPATD + V ++ N L+ K ENK +++K LGL D P++G I+RLV QKG LI A + L Sbjct: 124 PDLLHVNDWQPALIPAYISAFYNGK----PKTLLTIHNLGYQGEFDKSYFYKTGLP-EKLWQEGKAVKNGA---FNFLKTGIVTATAISTVSPTYAKEIQTPEYGAGLDETLRALSDRLFGILNGIDYSEYNPATDKRIPVNFDINSLEKKKENKIALQKELGLPVIDV--PVIGLISRLVEQKGFDLIEAAAEKIL 310
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_THEYD (Glycogen synthase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=glgA PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.065e-27 Identity = 69/206 (33.50%), Postives = 112/206 (54.37%), Query Frame = 3 Query: 6 DIIHCHDWQTAFVAPLYWDLYVPKG--LNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAGRTILY 617 D+IHCHDW TA + PLY + + T HN YQG P ++L G Q++ D ++ + +N LKG + ++I+TTVSP+YA+E+ T + G GL L + VGI+NGID WNP D F+ +Y ++ K +NKE + G++S+ + P++ I R+V QKG+ ++ A+ + G + ++ Sbjct: 146 DVIHCHDWHTALI-PLYLKTLYRECSCFEKTKTVLTVHNLGYQGIFPREKLELTGFG-QEMFHIDGLE---FYGMVNFLKGGLFNADIITTVSPTYAKEILTPDYGAGLDGVLRKRKENLVGIINGIDYKIWNPEEDPFIAKKYGLQNINDKQKNKEDLIALAGINSS-LQDPIIAFIGRMVYQKGIDIVVDAMPNLIKNGISFIF 345
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA2_BRAJA (Glycogen synthase 2 OS=Bradyrhizobium japonicum GN=glgA2 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.697e-27 Identity = 76/200 (38.00%), Postives = 108/200 (54.00%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 PDI+H HDWQ A +AP Y L+ V T HN YQG + + + GL + + I+ LK + F++ +TTVSP+YA+E+++ EGG GL L + GILNGID WNP TD+ + ++ A DL +A NK +++ L S+D PL+G I+RL QKG+ L+ AI LG G Sbjct: 134 PDIVHAHDWQ-AGLAPAY--LHYDNRPRPGTV-MTIHNMAYQGKFAPELIGAIGLPWSSFD----VNGLEYFGGISFLKAGLQFADRITTVSPTYAREIQSDEGGMGLGGLLRARAGALSGILNGIDIAVWNPQTDSHIAYRFGAEDLTFRAANKAVLQQQFNLDSSD-EAPLLGVISRLSWQKGLDLLLEAIPTILGEG 324
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_VARPS (Glycogen synthase OS=Variovorax paradoxus (strain S110) GN=glgA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.522e-27 Identity = 74/204 (36.27%), Postives = 105/204 (51.47%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNAND---LQGKAENKESIRKHLGLSS-ADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 P+++H HDW A +AP Y GL FT HN YQG + A GL + M H +++ +KG + F++ +TTVSP+YA+E++T E G GL L GILN +D + WNPATD+ L Y+ D + GKA K ++ LGL+ DA PL ++RL QKG+HL+ + L G Sbjct: 138 PEVVHAHDWH-AGLAPAYLHFAREAGLTRTGSVFTVHNLAYQGISAPWNFADLGLPAPAFH----MNGLEYHGQVSFMKGGLYFADRLTTVSPTYAREIQTPEQGFGLDGLLRLRGGVLTGILNAVDDEVWNPATDSALVQGYHTPDGRHMAGKARCKAVLQHQLGLAERPDA--PLFILVSRLTEQKGLHLVLGGLDTLLAEG 334
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_CLOBB (Glycogen synthase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=glgA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.522e-27 Identity = 73/200 (36.50%), Postives = 109/200 (54.50%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLN--SARVCFTCHNFEYQGTAPAKELASC-GLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTL 593 P++IHC+DWQT + L Y+ K + + F+ HN +QG L G D +Q + D D + +KGAI +S+++TTVS SYA+E++T E G+ L L S GILNGID D +NP D+ + Y+ N++ K ENK +++ LGL S + P++ +TRL QKG+ L+ H R L Sbjct: 126 PNVIHCNDWQTGMIPVLLKLEYMRKDMFYWDIKSVFSIHNIAFQGVFDPVILPELFGYDYEQYTNTNLKFD----DGVGFMKGAINYSDMITTVSYSYAEEIKTPEFGERLDWLLREKSYMLRGILNGIDYDEFNPKNDSLINKNYDVNNINDKYENKRNLQSELGL-SVNENIPMIAMVTRLTSQKGLDLLVHISERLL 320
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_BACCR (Glycogen synthase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=glgA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.522e-27 Identity = 65/191 (34.03%), Postives = 109/191 (57.07%), Query Frame = 3 Query: 6 DIIHCHDWQTAFVAPLYWDLYVPKGL-NSARVCFTCHNFEYQGTAPAKELASCGLDVQQL-NRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIR 572 D++H HDW TA V L + Y L + +T HN ++QG P + + D+ +L + + + +N +KG I+ S+ +T VSP+Y +E++ G+ L L ++ K GI+NGIDT +NP TD+++K QY+A L K+ENK +++++ GL + P++ +TRL QKG+ L+R Sbjct: 127 DVLHSHDWHTAMVNFLLREKYQDNPLYERIKTVYTIHNLQFQGVFPPEVI----YDLLELGDEYFHSEQLEFYGNVNFMKGGIIASDQITAVSPTYKEEIQYEFFGEKLDGLLRKYNDKLSGIVNGIDTSVYNPETDSYIKAQYDAESLYEKSENKRALQRYFGLPEKE-DTPIISMVTRLTKQKGLDLVR 312 The following BLAST results are available for this feature:
BLAST of CF417459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 360
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417459 ID=CF417459; Name=CF417459; organism=Citrus sinensis; type=EST; length=679bpback to top |