CF417459
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: SSY1_ORYSJ (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=Os06g0160700 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.025e-26 Identity = 75/195 (38.46%), Postives = 102/195 (52.31%), Query Frame = 3 Query: 21 HDWQTAFVAPLYWDLYVPKGL-NSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPD-------RMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAI 581 +DW + V L Y P G+ AR HN +QG PA GL + + R + +N LKGA+V ++ + TVS Y+ EV T+EGGQGL+ L+ GI+NGID + WNP+TD FL Y+ +DL GKA+ K ++K LGL PL+G I RL QKG+ LI+ AI Sbjct: 277 NDWHASLVPVLLAAKYRPYGVYRDARSVLVIHNLAHQGVEPASTYPDLGLPPEWYGALEWVFPEWARRHALDKGEAVNFLKGAVVTADRIVTVSQGYSWEVTTAEGGQGLNELLSSRKSVLNGIVNGIDINDWNPSTDKFLPYHYSVDDLSGKAKCKAELQKELGL-PIRPDVPLIGFIGRLDYQKGIDLIKLAI 470
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_YERP3 (Glycogen synthase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=glgA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.025e-26 Identity = 68/202 (33.66%), Postives = 105/202 (51.98%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNF--HSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 P+++H HDW Y+ AR FT HN YQG A L+ L + ++ + +I+ LK + F++ VTTVSP+YA+E+ G G+ L H + GILNG+D+D W+P +DT L +Y+A +LQ KA NK ++ +GL ++ KP+ ++RL QKG+ L+ A+ L G Sbjct: 130 PEVVHAHDWHAGLTCA-----YLAARGRPARSVFTVHNLAYQGLFSAHHLSELQLPAEFF----QIYGLEFYGQISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALAHQGRLTGILNGVDSDIWDPQSDTLLPTRYDAENLQAKAINKTHLQTAMGLQLTES-KPIFAVVSRLTAQKGLDLVLEALPELLALG 321
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_LACAC (Glycogen synthase OS=Lactobacillus acidophilus GN=glgA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.025e-26 Identity = 71/191 (37.17%), Postives = 107/191 (56.02%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLY-VPKGLNSARVCFTCHNFEYQGTAPAKELASC-GLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLI 569 PD++HC+D+ TAF+ L + + + T HN E+QG AK L G++ + DN +N +K I++++ VTTVSPSYA+E++T E GQGL + L S K GILNGID + +NP TD +K Y+ L K+++K +++K L L PL+G ++RL QKG L+ Sbjct: 126 PDVLHCNDYHTAFIPFLLHEKWGFVDAYKGIKTILTIHNLEFQGKYNAKTLPDFFGMNYDWFDSGIVRMDND----VNWMKTGILYADRVTTVSPSYAREIQTVEFGQGLDAILRMCSHKLTGILNGIDFEKYNPKTDPVIKKNYDVYHLHHKSKDKIALQKELDL-PIKPNIPLIGMVSRLTAQKGCQLL 311
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_THECA (Glycogen synthase OS=Thermus caldophilus GN=glgA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.338e-26 Identity = 75/200 (37.50%), Postives = 103/200 (51.50%), Query Frame = 3 Query: 6 DIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTA-PAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 D++H HDW A +A LY P +T HN +QG P + GL + M+ + R+N +KG IVF+ VTTV PSYA+E++T E G GL L H+ K GILNG+DT+ ++P D +L Y D GKA KE R+ GL R P++ + RL QKG+ L+ A+ R L G Sbjct: 117 DLVHAHDWTAALLA-----LYAP-------TVYTIHNLAHQGLVDPGLFFSWTGLPWSLFH----MEALEFYGRVNLMKGGIVFARRVTTVRPSYAEEIQTPEFGMGLDGVLRRHAGKLRGILNGLDTEVFDPGKDPYLPAPYTREDPSGKARAKEVFRERTGL-----RPPVLAYVGRLDYQKGLDLVLKALPRLLEMG 295
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_MARMS (Glycogen synthase OS=Marinomonas sp. (strain MWYL1) GN=glgA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.338e-26 Identity = 71/206 (34.47%), Postives = 108/206 (52.43%), Query Frame = 3 Query: 6 DIIHCHDWQTAFVAPLY--WDL-YVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAGRTIL 614 DI+H +DWQT F A W + ++P V T HN Y G+ + ++ L + LN M + R + LK +V++N VTTVSP+YA+E+ T E G GL L + VGILNG+D + W+P DT + Y+ + L K NK ++ + GLS D +P+ G ++RL QKG+ L+ + L G ++ Sbjct: 136 DILHLNDWQTGFAAAYLESWKVEHIP-------VVTTVHNLRYNGSFDMNQFSAMHLSPELLN----MHGMEFYGRFSGLKAGLVYANAVTTVSPTYAKEILTPEYGDGLDGALRAMQDRLVGILNGVDYNQWSPEKDTLIPHNYDIDTLSQKQANKLALLQENGLSE-DLNQPVFGVVSRLTEQKGLDLVLQVMPALLEKGARLV 329
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_DESVH (Glycogen synthase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=glgA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.338e-26 Identity = 73/198 (36.87%), Postives = 101/198 (51.01%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFV-APLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTL 593 P ++H HDWQTA V A LY+ R T HN +QG ++ + GL Q + + N LK I +++ VTTVSPSYA+E+ G GL L + GILNG D D W+P D FL +Y DL GKA+ K ++ + LGL AR+P++G I RL QKG+ L+ + R + Sbjct: 133 PAVLHAHDWQTALVPAFLYFLRQTDPFWQDTRSVLTIHNLAFQGRFASRLFETSGLPPQAWS----VDGAEFWGDFNLLKAGIAYADKVTTVSPSYAREILGPAYGSGLDGILRKRAHALHGILNGADYDIWSPGNDRFLPCRYTPTDLAGKAQCKRALIEELGLDPHLARRPILGFIGRLRGQKGIDLLLDILPRLM 326
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_BURTA (Glycogen synthase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=glgA PE=3 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.338e-26 Identity = 71/186 (38.17%), Postives = 102/186 (54.84%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSAR--VCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQK 554 PD++H HDW VA L +G AR FT HN +QG + A GL L+ + + +++ LK +++ +TTVSP+YA E++T+E G GL + GI+NGIDT+ WNPATD +L Y+ +D+ GKA K ++++ LGL ADAR PLV + RL QK Sbjct: 132 PDVVHAHDWHGGLVALL------TRGAGDARPKTVFTIHNAAFQGNFALDDAARIGLPADALS----VDGVEFYGQLSFLKAGARYADRLTTVSPTYAGEIQTAEFGCGLEGLYAARRDQLSGIMNGIDTELWNPATDRWLPQPYSIDDMGGKAGCKAALQQELGL-CADARAPLVASVCRLTSQK 306
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_STRZJ (Glycogen synthase OS=Streptococcus pneumoniae (strain JJA) GN=glgA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.748e-26 Identity = 73/203 (35.96%), Postives = 108/203 (53.20%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYV-PKGLNSARVCFTCHNFEYQGT---APAKELASCGLDVQQLNRPDRMQDNSA--HDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTL 593 PD++H HD+ TA + L + Y + T HN E+QG +L GL+ R D + ++ +N +K I+++N V+TVSPSYA E+ TS+ G L L S K GI+NGID D +NP TD L +N DL GKA+NK +++ +GL A PLVG ++RL QKG ++ +++ L Sbjct: 126 PDLLHVHDYHTAMIPFLLKEKYCWIQAYEDIETVLTIHNLEFQGQFSEGMLGDLFGVGLE--------RYADGTLRWNNCLNWMKAGILYANRVSTVSPSYAHEIMTSQFGCNLDQILKMESGKVSGIVNGIDADLYNPQTDALLDYHFNQEDLSGKAKNKAKLQERVGL-PVRADVPLVGIVSRLTRQKGFDVVVESLHHIL 319
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_STRPJ (Glycogen synthase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=glgA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.748e-26 Identity = 73/203 (35.96%), Postives = 108/203 (53.20%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYV-PKGLNSARVCFTCHNFEYQGT---APAKELASCGLDVQQLNRPDRMQDNSA--HDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTL 593 PD++H HD+ TA + L + Y + T HN E+QG +L GL+ R D + ++ +N +K I+++N V+TVSPSYA E+ TS+ G L L S K GI+NGID D +NP TD L +N DL GKA+NK +++ +GL A PLVG ++RL QKG ++ +++ L Sbjct: 126 PDLLHVHDYHTAMIPFLLKEKYCWIQAYEDIETVLTIHNLEFQGQFSEGMLGDLFGVGLE--------RYADGTLRWNNCLNWMKAGILYANRVSTVSPSYAHEIMTSQFGCNLDQILKMESGKVSGIVNGIDADLYNPQTDALLDYHFNQEDLSGKAKNKAKLQERVGL-PVRADVPLVGIVSRLTRQKGFDVVVESLHHIL 319
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPS (Glycogen synthase OS=Rhodopseudomonas palustris (strain BisB5) GN=glgA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.748e-26 Identity = 70/200 (35.00%), Postives = 104/200 (52.00%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 PDI+H HDWQT + P Y G + + FT HN YQG P++ LA GL R + + I LK + ++ +TTVSPSYA E++ SE G GL L + + GILNG+DT W+P+ D + Y+ + +A NK++++ GL A++ L G I+RL QKG+ ++ + L G Sbjct: 134 PDILHAHDWQTGLL-PAYLRY---SGRPAPKCVFTIHNLAYQGQFPSELLARIGLP----ERAFSLDGVEYYGGIGYLKAGLQLADRITTVSPSYALEIQGSEAGMGLEGLLRLRAGQLSGILNGVDTKVWDPSADQLIPATYDVETIGARARNKQALQARFGL-RAESGALLFGVISRLSWQKGLDMLLEVLPGMLADG 324 The following BLAST results are available for this feature:
BLAST of CF417459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 360
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417459 ID=CF417459; Name=CF417459; organism=Citrus sinensis; type=EST; length=679bpback to top |