CF417459
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_CALS8 (Glycogen synthase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=glgA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.748e-26 Identity = 77/202 (38.12%), Postives = 110/202 (54.46%), Query Frame = 3 Query: 6 DIIHCHDWQTAFVAPLYWDLYV--PKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSA---HDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQG-KAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTL 593 DIIH +DW T+ + L Y PK + T HN YQG P + + L+ PD D + +D I+ LKG I+F++ V TVS +YA E+RT G+GLH L+ +K VGI+NGID + NPATD + V Y+AN + K ENK +++ L L +D L+G ++RL +KG+ LI + R L Sbjct: 127 DIIHVNDWHTSVIPVLLKAHYSHSPKH-QKIKTVLTIHNLRYQGVFPKEVMYDL------LSLPDEYFDENKLKFYDAISFLKGGIIFADKVVTVSKTYANEIRTLSHGEGLHGLLSGIGEKLVGIVNGIDYEVCNPATDKLIFVNYDANTFESRKKENKFRLQQMLNLPVSD-DIVLIGMVSRLTKEKGIDLIERILSRLL 320
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: SSY1_ORYSI (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=OsI_021017 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26 Identity = 74/195 (37.95%), Postives = 102/195 (52.31%), Query Frame = 3 Query: 21 HDWQTAFVAPLYWDLYVPKGL-NSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPD-------RMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAI 581 +DW + V L Y P G+ AR HN +QG PA GL + + R + +N LKGA+V ++ + TVS Y+ EV T+EGGQGL+ L+ GI+NGID + WNP+TD FL Y+ +DL GKA+ K +++ LGL PL+G I RL QKG+ LI+ AI Sbjct: 277 NDWHASLVPVLLAAKYRPYGVYRDARSVLVIHNLAHQGVEPASTYPDLGLPPEWYGALEWVFPEWARRHALDKGEAVNFLKGAVVTADRIVTVSQGYSWEVTTAEGGQGLNELLSSRKSVLNGIVNGIDINDWNPSTDKFLPYHYSVDDLSGKAKCKAELQEELGL-PIRPDVPLIGFIGRLDYQKGIDLIKLAI 470
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_YERPY (Glycogen synthase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=glgA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26 Identity = 68/202 (33.66%), Postives = 106/202 (52.48%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSK--KFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 P+++H HDW Y+ AR FT HN YQG A L+ L + ++ + +I+ LK + F++ VTTVSP+YA+E+ G G+ L ++ + GILNG+D+D W+P +DT L +Y+A +LQ KA NK ++ +GL A+ KP+ ++RL QKG+ L+ A+ L G Sbjct: 130 PEVVHAHDWHAGLTCA-----YLAARGRPARSVFTVHNLAYQGLFSADHLSELHLPAEFF----QIYGLEFYGQISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAENLQAKAINKTHLQTAMGLQLAE-NKPIFAVVSRLTVQKGLDLVLEALPELLALG 321
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_YERPS (Glycogen synthase OS=Yersinia pseudotuberculosis GN=glgA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26 Identity = 68/202 (33.66%), Postives = 106/202 (52.48%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSK--KFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 P+++H HDW Y+ AR FT HN YQG A L+ L + ++ + +I+ LK + F++ VTTVSP+YA+E+ G G+ L ++ + GILNG+D+D W+P +DT L +Y+A +LQ KA NK ++ +GL A+ KP+ ++RL QKG+ L+ A+ L G Sbjct: 130 PEVVHAHDWHAGLTCA-----YLAARGRPARSVFTVHNLAYQGLFSADHLSELHLPAEFF----QIYGLEFYGQISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAENLQAKAINKTHLQTAMGLQLAE-NKPIFAVVSRLTVQKGLDLVLEALPELLALG 321
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_YERPP (Glycogen synthase OS=Yersinia pestis (strain Pestoides F) GN=glgA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26 Identity = 68/202 (33.66%), Postives = 106/202 (52.48%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSK--KFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 P+++H HDW Y+ AR FT HN YQG A L+ L + ++ + +I+ LK + F++ VTTVSP+YA+E+ G G+ L ++ + GILNG+D+D W+P +DT L +Y+A +LQ KA NK ++ +GL A+ KP+ ++RL QKG+ L+ A+ L G Sbjct: 130 PEVVHAHDWHAGLTCA-----YLAARGRPARSVFTVHNLAYQGLFSADHLSELHLPAEFF----QIYGLEFYGQISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAENLQAKAINKTHLQTAMGLQLAE-NKPIFAVVSRLTVQKGLDLVLEALPELLALG 321
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_YERPN (Glycogen synthase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=glgA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26 Identity = 68/202 (33.66%), Postives = 106/202 (52.48%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSK--KFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 P+++H HDW Y+ AR FT HN YQG A L+ L + ++ + +I+ LK + F++ VTTVSP+YA+E+ G G+ L ++ + GILNG+D+D W+P +DT L +Y+A +LQ KA NK ++ +GL A+ KP+ ++RL QKG+ L+ A+ L G Sbjct: 130 PEVVHAHDWHAGLTCA-----YLAARGRPARSVFTVHNLAYQGLFSADHLSELHLPAEFF----QIYGLEFYGQISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAENLQAKAINKTHLQTAMGLQLAE-NKPIFAVVSRLTVQKGLDLVLEALPELLALG 321
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_YERPG (Glycogen synthase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=glgA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26 Identity = 68/202 (33.66%), Postives = 106/202 (52.48%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSK--KFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 P+++H HDW Y+ AR FT HN YQG A L+ L + ++ + +I+ LK + F++ VTTVSP+YA+E+ G G+ L ++ + GILNG+D+D W+P +DT L +Y+A +LQ KA NK ++ +GL A+ KP+ ++RL QKG+ L+ A+ L G Sbjct: 130 PEVVHAHDWHAGLTCA-----YLAARGRPARSVFTVHNLAYQGLFSADHLSELHLPAEFF----QIYGLEFYGQISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAENLQAKAINKTHLQTAMGLQLAE-NKPIFAVVSRLTVQKGLDLVLEALPELLALG 321
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_YERPE (Glycogen synthase OS=Yersinia pestis GN=glgA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26 Identity = 68/202 (33.66%), Postives = 106/202 (52.48%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSK--KFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 P+++H HDW Y+ AR FT HN YQG A L+ L + ++ + +I+ LK + F++ VTTVSP+YA+E+ G G+ L ++ + GILNG+D+D W+P +DT L +Y+A +LQ KA NK ++ +GL A+ KP+ ++RL QKG+ L+ A+ L G Sbjct: 130 PEVVHAHDWHAGLTCA-----YLAARGRPARSVFTVHNLAYQGLFSADHLSELHLPAEFF----QIYGLEFYGQISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAENLQAKAINKTHLQTAMGLQLAE-NKPIFAVVSRLTVQKGLDLVLEALPELLALG 321
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_YERPA (Glycogen synthase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=glgA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26 Identity = 68/202 (33.66%), Postives = 106/202 (52.48%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSK--KFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 P+++H HDW Y+ AR FT HN YQG A L+ L + ++ + +I+ LK + F++ VTTVSP+YA+E+ G G+ L ++ + GILNG+D+D W+P +DT L +Y+A +LQ KA NK ++ +GL A+ KP+ ++RL QKG+ L+ A+ L G Sbjct: 130 PEVVHAHDWHAGLTCA-----YLAARGRPARSVFTVHNLAYQGLFSADHLSELHLPAEFF----QIYGLEFYGQISYLKAGLFFADHVTTVSPTYAKEITQPAFGYGMEGLLQALARQGRLTGILNGVDSDIWDPQSDTLLPTRYDAENLQAKAINKTHLQTAMGLQLAE-NKPIFAVVSRLTVQKGLDLVLEALPELLALG 321
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_ROSDO (Glycogen synthase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=glgA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26 Identity = 72/206 (34.95%), Postives = 105/206 (50.97%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTL--GAGRTIL 614 P+I+H HDWQ V + PK T HN +QG +A GLD L D M+ + + LK + F++ +TTVSP+YA+E+ E G GL L ++ GILNGIDTD WNP TD L Y+ L+ K ++++++ + GL+ D PL I+RL QKGV ++ + + GAG +L Sbjct: 131 PEIVHAHDWQAGLVPAYLHQMDAPK----PPCVLTIHNIAFQGLFSPDLMAPLGLDAA-LYTQDGME---FYGNLGFLKAGLAFADKITTVSPTYAREIMQPEFGMGLEGLLRARARDVSGILNGIDTDVWNPETDPALPKSYSLKGLKAKQQSRQAVLERFGLTPPD-NAPLFCVISRLTTQKGVDVLLDVVPDLVARGAGLAVL 327 The following BLAST results are available for this feature:
BLAST of CF417459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 360
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417459 ID=CF417459; Name=CF417459; organism=Citrus sinensis; type=EST; length=679bpback to top |