CF417462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_BURPS (3-deoxy-manno-octulosonate cytidylyltransferase OS=Burkholderia pseudomallei GN=kdsB PE=3 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 9.374e-20 Identity = 51/155 (32.90%), Postives = 85/155 (54.84%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN----------PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPEDVEKIESFMRER 431 LI+P+++ V L A P +TA + + + F+PN VK V+D HG A+YFSR IP+++ + P P H+G+ +Y + FL+ YP L P++ E LEQL+ + +G ++ V +H G+D P D+E++++ R R Sbjct: 107 LIDPQLVRDVASHLAAHPSCAIATAAHPIHEAHEVFNPNYVKVVLDAHGVALYFSRAPIPWSRDAYLPHWPNVAAMPAPTCPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRAMWHGERIAVRVTEHAPEAGIDTPADLERVQALFRSR 261
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_BURP6 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Burkholderia pseudomallei (strain 668) GN=kdsB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.374e-20 Identity = 51/155 (32.90%), Postives = 85/155 (54.84%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN----------PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPEDVEKIESFMRER 431 LI+P+++ V L A P +TA + + + F+PN VK V+D HG A+YFSR IP+++ + P P H+G+ +Y + FL+ YP L P++ E LEQL+ + +G ++ V +H G+D P D+E++++ R R Sbjct: 107 LIDPQLVRDVASHLAAHPSCAIATAAHPIHEAHEVFNPNYVKVVLDAHGVALYFSRAPIPWSRDAYLPHWPNVAAMPAPTCPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRAMWHGERIAVRVTEHAPEAGIDTPADLERVQALFRSR 261
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_BURP1 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Burkholderia pseudomallei (strain 1710b) GN=kdsB PE=3 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 9.374e-20 Identity = 51/155 (32.90%), Postives = 85/155 (54.84%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN----------PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPEDVEKIESFMRER 431 LI+P+++ V L A P +TA + + + F+PN VK V+D HG A+YFSR IP+++ + P P H+G+ +Y + FL+ YP L P++ E LEQL+ + +G ++ V +H G+D P D+E++++ R R Sbjct: 107 LIDPQLVRDVASHLAAHPSCAIATAAHPIHEAHEVFNPNYVKVVLDAHGVALYFSRAPIPWSRDAYLPHWPNVAAMPAPTCPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRAMWHGERIAVRVTEHAPEAGIDTPADLERVQALFRSR 261
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_BURP0 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Burkholderia pseudomallei (strain 1106a) GN=kdsB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.374e-20 Identity = 51/155 (32.90%), Postives = 85/155 (54.84%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN----------PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPEDVEKIESFMRER 431 LI+P+++ V L A P +TA + + + F+PN VK V+D HG A+YFSR IP+++ + P P H+G+ +Y + FL+ YP L P++ E LEQL+ + +G ++ V +H G+D P D+E++++ R R Sbjct: 107 LIDPQLVRDVASHLAAHPSCAIATAAHPIHEAHEVFNPNYVKVVLDAHGVALYFSRAPIPWSRDAYLPHWPNVAAMPAPTCPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRAMWHGERIAVRVTEHAPEAGIDTPADLERVQALFRSR 261
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_BURMS (3-deoxy-manno-octulosonate cytidylyltransferase OS=Burkholderia mallei (strain SAVP1) GN=kdsB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.374e-20 Identity = 51/155 (32.90%), Postives = 85/155 (54.84%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN----------PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPEDVEKIESFMRER 431 LI+P+++ V L A P +TA + + + F+PN VK V+D HG A+YFSR IP+++ + P P H+G+ +Y + FL+ YP L P++ E LEQL+ + +G ++ V +H G+D P D+E++++ R R Sbjct: 107 LIDPQLVRDVASHLAAHPSCAIATAAHPIHEAHEVFNPNYVKVVLDAHGVALYFSRAPIPWSRDAYLPHWPNVAAMPAPTCPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRAMWHGERIAVRVTEHAPEAGIDTPADLERVQALFRSR 261
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_BURMA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Burkholderia mallei GN=kdsB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.374e-20 Identity = 51/155 (32.90%), Postives = 85/155 (54.84%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN----------PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPEDVEKIESFMRER 431 LI+P+++ V L A P +TA + + + F+PN VK V+D HG A+YFSR IP+++ + P P H+G+ +Y + FL+ YP L P++ E LEQL+ + +G ++ V +H G+D P D+E++++ R R Sbjct: 107 LIDPQLVRDVASHLAAHPSCAIATAAHPIHEAHEVFNPNYVKVVLDAHGVALYFSRAPIPWSRDAYLPHWPNVAAMPAPTCPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRAMWHGERIAVRVTEHAPEAGIDTPADLERVQALFRSR 261
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_BURM9 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Burkholderia mallei (strain NCTC 10229) GN=kdsB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.374e-20 Identity = 51/155 (32.90%), Postives = 85/155 (54.84%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN----------PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPEDVEKIESFMRER 431 LI+P+++ V L A P +TA + + + F+PN VK V+D HG A+YFSR IP+++ + P P H+G+ +Y + FL+ YP L P++ E LEQL+ + +G ++ V +H G+D P D+E++++ R R Sbjct: 107 LIDPQLVRDVASHLAAHPSCAIATAAHPIHEAHEVFNPNYVKVVLDAHGVALYFSRAPIPWSRDAYLPHWPNVAAMPAPTCPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRAMWHGERIAVRVTEHAPEAGIDTPADLERVQALFRSR 261
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_BURM7 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Burkholderia mallei (strain NCTC 10247) GN=kdsB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.374e-20 Identity = 51/155 (32.90%), Postives = 85/155 (54.84%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN----------PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPEDVEKIESFMRER 431 LI+P+++ V L A P +TA + + + F+PN VK V+D HG A+YFSR IP+++ + P P H+G+ +Y + FL+ YP L P++ E LEQL+ + +G ++ V +H G+D P D+E++++ R R Sbjct: 107 LIDPQLVRDVASHLAAHPSCAIATAAHPIHEAHEVFNPNYVKVVLDAHGVALYFSRAPIPWSRDAYLPHWPNVAAMPAPTCPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRAMWHGERIAVRVTEHAPEAGIDTPADLERVQALFRSR 261
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_CHLTB (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=kdsB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.599e-19 Identity = 56/141 (39.72%), Postives = 79/141 (56.03%), Query Frame = 3 Query: 6 IEPEIIDGVVKALQAAPDAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDAPEDVEKIESFM 422 + P +IDG+V L+ P A T VT + PE ++VKCV D +G A+YFSR IP+N P LH+G+ ++ FL Y + P+ L L EDLEQL+VLE G + V V + VD PED+ K+E ++ Sbjct: 110 LSPTVIDGLVSTLENNPAADMVTPVTETTDPEAILTDHKVKCVFDKNGKALYFSRSAIPHNFKHPT----PIYLHIGVYAFRKAFLSEYVKIPPSSLSLAEDLEQLRVLETGRSIYVHVVQNATGPSVDYPEDITKVEQYL 246
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_CHLT2 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=kdsB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.599e-19 Identity = 56/141 (39.72%), Postives = 79/141 (56.03%), Query Frame = 3 Query: 6 IEPEIIDGVVKALQAAPDAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDAPEDVEKIESFM 422 + P +IDG+V L+ P A T VT + PE ++VKCV D +G A+YFSR IP+N P LH+G+ ++ FL Y + P+ L L EDLEQL+VLE G + V V + VD PED+ K+E ++ Sbjct: 110 LSPTVIDGLVSTLENNPAADMVTPVTETTDPEAILTDHKVKCVFDKNGKALYFSRSAIPHNFKHPT----PIYLHIGVYAFRKAFLSEYVKIPPSSLSLAEDLEQLRVLETGRSIYVHVVQNATGPSVDYPEDITKVEQYL 246 The following BLAST results are available for this feature:
BLAST of CF417462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417462 ID=CF417462; Name=CF417462; organism=Citrus sinensis; type=EST; length=681bpback to top |