CF417462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_CHLPD (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=kdsB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.599e-19 Identity = 55/144 (38.19%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPED---AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMR 425 LI PE ID ++ ST V L PED D N VK V+DN GYA+YFSR IPY + +++ H+G+ ++ ++ L + L P+ L+L E LEQL++LENGY+++ +K +A GV+ ED+E + +R Sbjct: 101 LISPENIDLALEPFFTETPPDCSTLVFPLLPEDFRQLEDINTVKVVMDNAGYALYFSRSPIPYQR--QISTSTECYRHIGLYAFRADVLHAFASLAPSMLELAESLEQLRLLENGYRIRCVKTTRDAPGVNTYEDLELVRQLLR 242
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_VIBFM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio fischeri (strain MJ11) GN=kdsB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.088e-19 Identity = 57/145 (39.31%), Postives = 83/145 (57.24%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFM 422 LI P II V + L + + + AVT + +D F+PN VK V D GYA+YFSR IP+++ G+ P L H+GI +Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD PED+EK+ + + Sbjct: 103 LIPPSIIQQVAQNLSDSVAPMATLAVTIDEEDDVFNPNAVKVVTDAEGYALYFSRASIPWDRDAFAQGETLTANPLLRHIGIYAYRAGFINTYINWQPSVLEKIECLEQLRVLWYGEKIHVAVAKEAPAAGVDTPEDLEKVRAIL 247
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_VIBF1 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=kdsB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.088e-19 Identity = 57/145 (39.31%), Postives = 83/145 (57.24%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFM 422 LI P II V + L + + + AVT + +D F+PN VK V D GYA+YFSR IP+++ G+ P L H+GI +Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD PED+EK+ + + Sbjct: 103 LIPPSIIQQVAQNLSDSVAPMATLAVTIDEEDDVFNPNAVKVVTDAEGYALYFSRASIPWDRDAFAQGETLTANPLLRHIGIYAYRAGFINTYINWQPSVLEKIECLEQLRVLWYGEKIHVAVAKEAPAAGVDTPEDLEKVRAIL 247
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_CHLTR (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia trachomatis GN=kdsB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.088e-19 Identity = 56/141 (39.72%), Postives = 80/141 (56.74%), Query Frame = 3 Query: 6 IEPEIIDGVVKALQAAPDAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDAPEDVEKIESFM 422 + P +IDG+V L+ P A T+VT + PE ++VKCV D +G A+YFSR IP+N P LH+G+ ++ FL Y + P+ L L EDLEQL+VLE G + V V + VD PED+ K+E ++ Sbjct: 110 LSPTVIDGLVSTLENNPAADMVTSVTETTDPEAILTDHKVKCVFDKNGKALYFSRSAIPHNFKHPT----PIYLHIGVYAFRKAFLSEYVKIPPSSLSLAEDLEQLRVLEIGRSIYVHVVQNATGPSVDYPEDITKVEQYL 246
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_CHLTA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=kdsB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.088e-19 Identity = 56/141 (39.72%), Postives = 80/141 (56.74%), Query Frame = 3 Query: 6 IEPEIIDGVVKALQAAPDAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDAPEDVEKIESFM 422 + P +IDG+V L+ P A T+VT + PE ++VKCV D +G A+YFSR IP+N P LH+G+ ++ FL Y + P+ L L EDLEQL+VLE G + V V + VD PED+ K+E ++ Sbjct: 110 LSPTVIDGLVSTLENNPAADMVTSVTETTDPEAILTDHKVKCVFDKNGKALYFSRSAIPHNFKHPT----PIYLHIGVYAFRKAFLSEYVKIPPSSLSLAEDLEQLRVLEIGRSIYVHVVQNATGPSVDYPEDITKVEQYL 246
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_BURTA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=kdsB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.088e-19 Identity = 50/155 (32.26%), Postives = 86/155 (55.48%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN----------PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPEDVEKIESFMRER 431 LI+P+++ V L A P +TA + + + F+PN VK V+D +G A+YFSR IP+++ + P P H+G+ +Y + FL+ YP L P++ E LEQL+ + +G ++ V+ +H G+D P D+E++++ R R Sbjct: 107 LIDPQLVCDVASHLAAHPSCAIATAAHPIHEAHEVFNPNYVKVVLDANGVALYFSRAPIPWSRDAYLPHWPNIAAMPAPTCPVYRHIGLYAYRARFLRTYPTLAQAPIEAAEQLEQLRAMWHGERIAVLVTEHAPEAGIDTPADLERVQALFRSR 261
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_GEOBB (3-deoxy-manno-octulosonate cytidylyltransferase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=kdsB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.727e-19 Identity = 53/145 (36.55%), Postives = 81/145 (55.86%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--------GKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 410 LI+P +ID ++ L P +T +K D PN VK V D G +YFSR +P+ + V+ + H+G+ Y FL ++ GL PT L+L E LEQL+VLENGY++K+++ + E+ GVD P D++K+ Sbjct: 101 LIDPAMIDEAIRPLLDDPSIPMATLKCRIKTLHDFLSPNVVKVVSDPTGNVLYFSRSPLPFFRDKWNDLKDDAFVSGKLLCYKHVGLYVYRREFLPVFAGLQPTYLELAEKLEQLRVLENGYRIKIVETEFESIGVDTPADLDKV 245
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_CHLMU (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia muridarum GN=kdsB PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.727e-19 Identity = 57/141 (40.43%), Postives = 79/141 (56.03%), Query Frame = 3 Query: 6 IEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPN-RVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDAPEDVEKIESFM 422 + P IIDG+V+ L+ P +T VT DA N +VKCV D G A+YFSR +IP N P LH+G+ ++ FL Y + P+ L L EDLEQL+VLE+G + V V + VD PED+ K+E ++ Sbjct: 110 LSPSIIDGLVEMLEGNPAIDIATPVTETVDPDAILTNHKVKCVFDKTGRALYFSRSVIPNNFKRST----PIYLHIGVYAFRRAFLSEYVKIPPSSLSLAEDLEQLRVLESGRSIYVHVVQNATGPSVDYPEDISKVEQYL 246
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_AZOSE (3-deoxy-manno-octulosonate cytidylyltransferase OS=Azoarcus sp. (strain EbN1) GN=kdsB PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.562e-19 Identity = 57/146 (39.04%), Postives = 85/146 (58.22%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD-HEAHGVDAPEDVEKIES 416 LIEP++I V +AL P A +TA L + F+PN VK V D H +A+YFSR IP+ + + P L H+G+ +Y FL+ Y L P+PL+ E LEQL+ L +G++++V+ V A GVD PED+E++ + Sbjct: 104 LIEPKLIAAVAQALADDPVAAIATAAHPLHAAAELFNPNVVKVVCDAHDHALYFSRAPIPWARDAFATARDDIPAGLPVLRHVGLYAYRVAFLRCYASLAPSPLEQWEALEQLRALWHGHRIRVMTVAVAPAAGVDTPEDLERVRA 249
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_GEOSF (3-deoxy-manno-octulosonate cytidylyltransferase OS=Geobacter sp. (strain FRC-32) GN=kdsB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.652e-19 Identity = 57/153 (37.25%), Postives = 83/153 (54.25%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP---------QFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRER 431 LI+P +ID + L + T T +K D PN VK V D GYA+YFSR +P N K N + H+G+ Y FL + + PT L++ E LEQL+VLENGY++KV++ D E+ GVD P D++K+ +++R Sbjct: 101 LIDPAMIDEAISPLAEDSSLLMGTLKTRIKSLHDFLSPNVVKVVTDWEGYALYFSRSPLP-NFRDKWNDLKDEAFSSRKLLCFKHVGLYVYRREFLLQFAQMSPTYLEMAEKLEQLRVLENGYRIKVVETDFESIGVDTPGDLDKVLERLKDR 252 The following BLAST results are available for this feature:
BLAST of CF417462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417462 ID=CF417462; Name=CF417462; organism=Citrus sinensis; type=EST; length=681bpback to top |