CF417462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_ANADF (3-deoxy-manno-octulosonate cytidylyltransferase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=kdsB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.652e-19 Identity = 50/140 (35.71%), Postives = 84/140 (60.00%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 422 LIEPE I+ +V+A++ + +T L+PE+ VK V D HG A+YFSR IP+ ++G V+ H+GI ++ + FL+ + L P L+ EE LEQL+ LE+G++++V + G+D PED+++ + + Sbjct: 103 LIEPEAIETLVRAMEGGVE--MATLARPLEPEELERTQVVKVVTDRHGDALYFSRAPIPHRRAGGVSALAR--AHVGIYAFTAAFLQEFAALPPGRLEAEESLEQLRALEHGHRIRVADTAYRGFGIDTPEDLDRARALL 238
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_PSEHT (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=kdsB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19 Identity = 59/156 (37.82%), Postives = 89/156 (57.05%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQ--AAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ-----FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-----GVDAPEDVEKIESFMRERN 434 L+ PE + V L AP A S A+ + ED F+PN VK V D + A+YFSR IP+++S + Q P+ H+GI +Y + F+K Y L +PL+ E LEQL+VL +GY +K+ +AH GVD PED+ K+ S+++ ++ Sbjct: 103 LLAPENVSQVATLLNESTAPMATLSVAIE--EQEDVFNPNAVKVVSDINKNALYFSRASIPFDRSAMMGEQSTLDLTPFQRHVGIYAYRAGFIKQYIELSVSPLEQLESLEQLRVLYHGYNIKI----EQAHITPQAGVDTPEDLAKVISYLQSKH 252
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_LEPBL (3-deoxy-manno-octulosonate cytidylyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=kdsB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.036e-18 Identity = 59/144 (40.97%), Postives = 75/144 (52.08%), Query Frame = 3 Query: 6 IEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIESFMRER 431 IEPE+IDGV + P+ STA L DPNRVK ++D +G AIYFSR LIP + P HLGI YD +FL Y L + L+ E LEQL+ +E GY + V VD P D+E IE F + + Sbjct: 104 IEPELIDGVAGLKASHPEWKMSTAAVPLIDFSHGEDPNRVKVIIDRNGKAIYFSRSLIP----SQFKQTVPLYRHLGIYGYDRDFLLKYNSLPKSNLEESESLEQLRAIEAGYGIGVYLAQEAGLSVDTPADLEVVIEDFKKRK 243
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_LEPBJ (3-deoxy-manno-octulosonate cytidylyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=kdsB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.036e-18 Identity = 59/144 (40.97%), Postives = 75/144 (52.08%), Query Frame = 3 Query: 6 IEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIESFMRER 431 IEPE+IDGV + P+ STA L DPNRVK ++D +G AIYFSR LIP + P HLGI YD +FL Y L + L+ E LEQL+ +E GY + V VD P D+E IE F + + Sbjct: 104 IEPELIDGVAGLKASHPEWKMSTAAVPLIDFSHGEDPNRVKVIIDRNGKAIYFSRSLIP----SQFKQTVPLYRHLGIYGYDRDFLLKYNSLPKSNLEESESLEQLRAIEAGYGIGVYLAQEAGLSVDTPADLEVVIEDFKKRK 243
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_DECAR (3-deoxy-manno-octulosonate cytidylyltransferase OS=Dechloromonas aromatica (strain RCB) GN=kdsB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.036e-18 Identity = 59/153 (38.56%), Postives = 80/153 (52.29%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS-------GKVNP-QFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD-HEAHGVDAPEDVEKIESFMRERN 434 LIEPE+I + L A+ + + A D F+PN VK V G A YFSR IPY + G+ P FP H+G+ +Y ++FLK Y GL P P + E LEQL+ L +GY++ V +D A GVD PED E++ N Sbjct: 106 LIEPEVIIQTARQLAASGADIATVAHPITDAADFFNPNVVKVVCRADGDAAYFSRAPIPYARDHFAKEDGGETLPANFPAYRHVGLYAYRASFLKAYAGLMPAPTEHFESLEQLRALWHGYRISVTLIDAAPAPGVDTPEDAERMRKLFDRAN 258
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_LEPIN (3-deoxy-manno-octulosonate cytidylyltransferase OS=Leptospira interrogans GN=kdsB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.354e-18 Identity = 59/147 (40.14%), Postives = 77/147 (52.38%), Query Frame = 3 Query: 6 IEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIESFMRERNLS 440 IEPE+IDGV + P+ STA L A D NRVK ++D +G AIYFSR LIP + P HLGI YD +FL Y L + L+ E LEQL+ +E GY + + VD P D+E IE F + + +S Sbjct: 105 IEPELIDGVASLKASHPEWAMSTAAVPLLDFSHAIDFNRVKVIIDRNGKAIYFSRSLIP----SQFKTTVPLYRHLGIYGYDRDFLLQYNSLPKSNLEESESLEQLRAIEAGYGIGIYLSKEAGLSVDTPADLEIVIEDFKKRKWIS 247
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_LEPIC (3-deoxy-manno-octulosonate cytidylyltransferase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=kdsB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.354e-18 Identity = 59/147 (40.14%), Postives = 77/147 (52.38%), Query Frame = 3 Query: 6 IEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVE-KIESFMRERNLS 440 IEPE+IDGV + P+ STA L A D NRVK ++D +G AIYFSR LIP + P HLGI YD +FL Y L + L+ E LEQL+ +E GY + + VD P D+E IE F + + +S Sbjct: 105 IEPELIDGVASLKASHPEWAMSTAAVPLLDFSHAIDFNRVKVIIDRNGKAIYFSRSLIP----SQFKTTVPLYRHLGIYGYDRDFLLQYNSLPKSNLEESESLEQLRAIEAGYGIGIYLSKEAGLSVDTPADLEIVIEDFKKRKWIS 247
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_ALISL (3-deoxy-manno-octulosonate cytidylyltransferase OS=Aliivibrio salmonicida (strain LFI1238) GN=kdsB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.354e-18 Identity = 57/145 (39.31%), Postives = 82/145 (56.55%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFM 422 LI P II V K L + + + AVT + ED F+PN VK V D GYA+YFSR IP+++ G+ P L H+GI +Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD ED++K+ + + Sbjct: 103 LIPPSIIRQVAKNLADSIAPMATLAVTIDEEEDVFNPNAVKVVTDAEGYALYFSRAAIPWDRDAFAKGEALTANPLLRHIGIYAYRAGFINTYINWQPSVLEKIECLEQLRVLWYGEKIHVAVAKEAPAAGVDTQEDLDKVRAIL 247
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_CHLTE (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlorobium tepidum GN=kdsB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.768e-18 Identity = 53/147 (36.05%), Postives = 84/147 (57.14%), Query Frame = 3 Query: 3 LIEPEIID-GVVKALQAAPDAVFSTAVTSLKPEDAF---DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRER 431 LI+P ID + P +T V LKP++ DP+ VK V+D G A+YFSR IPY + + P Y H+G+ ++ ++ LK + L P+ L+ E LEQL++LENGY+++ I+ + GV+ E++E++ RER Sbjct: 101 LIDPATIDLAIAPFFGEGPLPDCTTLVFPLKPDERQIIDDPHVVKAVLDTRGNALYFSRSPIPYRR--ETLPDTKYYRHIGLYAFRADVLKAFVALPPSMLERAESLEQLRLLENGYRIRCIETTTDTPGVNTEEELEEVRRLFRER 245
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_VIBVY (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio vulnificus (strain YJ016) GN=kdsB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.309e-18 Identity = 58/151 (38.41%), Postives = 84/151 (55.63%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQA--APDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMRERN 434 LI P II V + L A AP A A+TS E+ F+PN VK V D GYA+YFSR IP+++ G+V + + H+GI +Y + F+ Y P+ L+ E LEQL+VL G K+ V + + GVD PED+E + + ++ Sbjct: 103 LIPPSIIRQVAENLAASSAPMATLGVAITS--EEEVFNPNAVKVVTDKEGYALYFSRATIPWDRDAFARGEVLTEHSLMRHIGIYAYRAGFINTYVNWQPSSLEKIECLEQLRVLWYGEKIHVELAKEAPPAGVDTPEDLELVRKIIAAKS 251 The following BLAST results are available for this feature:
BLAST of CF417462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417462 ID=CF417462; Name=CF417462; organism=Citrus sinensis; type=EST; length=681bpback to top |