CF417462

Overview
NameCF417462
Unique NameCF417462
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_RICRO (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rickettsia rickettsii (strain Iowa) GN=kdsB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11
Identity = 46/138 (33.33%), Postives = 70/138 (50.72%), Query Frame = 3
Query:    6 IEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 419
            IEP  I  +++ L+ +   +  T +  +  E     + V  VVD+ G A+YFSR LIP       N    +L H+G+  +  N L+ +  L PT L+  E LEQL+ LENG  +    V++    VD  ED++K   F
Sbjct:  108 IEPSSILKIIEYLKNSKYDIV-TPIVKVDRESVKASSNVTVVVDSAGTALYFSRSLIP-------NGAEEFLYHVGMYGFRKNALEKFVSLKPTFLEKTERLEQLRALENGMTIGTCLVENVPISVDTEEDLKKAVKF 237          
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_RICPU (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rickettsia peacockii (strain Rustic) GN=kdsB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11
Identity = 46/138 (33.33%), Postives = 70/138 (50.72%), Query Frame = 3
Query:    6 IEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 419
            IEP  I  +++ L+ +   +  T +  +  E     + V   VD+ G A+YFSR LIP       N    +L H+G+  +  N L+ +  L PT L+  E LEQL+VLENG  +    V++    VD  ED++K   F
Sbjct:  108 IEPSSILKIIEYLKNSKYDIV-TPIVKVDRESVKASSNVTVAVDSAGTALYFSRSLIP-------NGAEEFLYHVGMYGFRKNALEKFVSLKPTFLEKTERLEQLRVLENGMTIGTCLVENVPISVDTEEDLKKAVKF 237          
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_RICM5 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rickettsia massiliae (strain Mtu5) GN=kdsB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11
Identity = 46/138 (33.33%), Postives = 70/138 (50.72%), Query Frame = 3
Query:    6 IEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 419
            IEP  I  +++ L+ +   +  T +  +  E     + V   VD+ G A+YFSR LIP       N    +L H+G+  +  N L+ +  L PT L+  E LEQL+VLENG  +    V++    VD  ED++K   F
Sbjct:  108 IEPSSILKIIEYLKNSEYDIV-TPIVKVDRESVEASSNVTVAVDSAGTALYFSRSLIP-------NGAEEFLYHVGMYGFRKNALEKFVSLKPTFLEKTERLEQLRVLENGMTIGTCLVENVPISVDTEEDLKKAVKF 237          
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_RICAH (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rickettsia akari (strain Hartford) GN=kdsB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11
Identity = 46/138 (33.33%), Postives = 70/138 (50.72%), Query Frame = 3
Query:    6 IEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 419
            IEP  +  +++ L+ +   +  T V  +  E     + V   VD+ G A+YFSR LIP       N    +L H+G+  +  N L+ +  L PT L+  E LEQL+VLENG  +    V++    VD  ED++K   F
Sbjct:  108 IEPSSVLKIIEYLKNSEYDIV-TPVVKVDRESVEASSNVTVAVDSAGKALYFSRSLIP-------NGAEEFLYHVGMYGFRKNALEKFVSLKPTFLEKTERLEQLRVLENGMTIGTCLVENVPISVDTEEDLKKAVKF 237          
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_RICAE (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rickettsia africae (strain ESF-5) GN=kdsB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11
Identity = 46/138 (33.33%), Postives = 70/138 (50.72%), Query Frame = 3
Query:    6 IEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 419
            IEP  I  +++ L+ +   +  T +  +  E     + V   VD+ G A+YFSR LIP       N    +L H+G+  +  N L+ +  L PT L+  E LEQL+VLENG  +    V++    VD  ED++K   F
Sbjct:  108 IEPSSILKIIEYLKNSKYDIV-TPIVKVDRESVKASSNVTVAVDSAGTALYFSRSLIP-------NGAEEFLYHVGMYGFRKNALEKFVSLKPTFLEKTERLEQLRVLENGMTIGTCLVENVPISVDTEEDLKKAVKF 237          
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_RHIME (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rhizobium meliloti GN=kdsB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11
Identity = 45/146 (30.82%), Postives = 68/146 (46.58%), Query Frame = 3
Query:    6 IEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCV----VDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRER 431
            IEP  I   +K L+     + +  V      +  +PN VK V     D+   A+YF+R   PY +        P   H+G+ +Y    L+ +  L P+ L+  E LEQL+ LE G ++ V  VD    GVD P D++K    +  R
Sbjct:  111 IEPGPIRAALKPLENPATDIATLTVAITDEHEKTNPNVVKVVGSPLSDSRFRALYFTRATAPYGEG-------PLYHHIGLYAYRRKALETFVSLKPSTLEKRESLEQLRALEAGMRIDVEVVDSVPLGVDTPADLDKARRILSAR 249          
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_GRAFK (3-deoxy-manno-octulosonate cytidylyltransferase OS=Gramella forsetii (strain KT0803) GN=kdsB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11
Identity = 39/120 (32.50%), Postives = 64/120 (53.33%), Query Frame = 3
Query:   78 VTSLKP-----EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 422
            +TSLK      +D  +PN VK +     +A+YFSR  IPY +    N    Y  H+GI ++  + L  +  L    L+  E +E ++ LE G K+K+++   ++ G+D PED+EK    +
Sbjct:  130 LTSLKTPLKDSDDITNPNNVKVITGKDDFALYFSRFPIPYRRDTSAN--VTYYKHIGIYAFRKSALMDFYRLPMLHLEAAEKIECIRYLEYGKKIKMVETSVKSVGIDTPEDLEKARKLL 247          
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_ACIAD (3-deoxy-manno-octulosonate cytidylyltransferase OS=Acinetobacter sp. (strain ADP1) GN=kdsB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11
Identity = 46/147 (31.29%), Postives = 74/147 (50.34%), Query Frame = 3
Query:    3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNR-VKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ---FPYLL-HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD-HEAHGVDAPEDVEKIESFMR 425
            L+   ++  V + L A P+   ST    +   D F  +  VK V+  +  A+YFSR  IPY++      Q   F +   HLG+ +Y    L+ Y       L+  E LEQL+VLENG+++ +   + +   GVD P D+E++ +  R
Sbjct:  103 LLPATLVQQVAELLVAKPNCSMSTLCEPIHTLDEFQRDSIVKVVMSQYQEALYFSRATIPYDRDAAQTQQSSRFEHAYRHLGLYAYRVGLLQEYVAWQQGVLEKLESLEQLRVLENGHRIAIALAEVNLPPGVDTPADLERLNALPR 249          
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_VESOH (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=kdsB PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11
Identity = 40/137 (29.20%), Postives = 66/137 (48.18%), Query Frame = 3
Query:    3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKV-DHEAHGVDAPEDVEKI 410
            +++P +ID VV  L   P  + +           FDPN VK V +  G A+YFSR  IP+ +  +         H+G+ +Y +  +K Y  ++ +  +  E LEQL  L  G+ + V        HGVD   D++++
Sbjct:  103 MLDPSVIDQVVNNLATNPMQIATLCKQITDKAQYFDPNCVKVVFNKIGKALYFSRATIPFFREARDFDLKLCYKHIGVYAYRAGVIKQYLTMNSSSYEKVEKLEQLTALNEGFDIHVAPACASVGHGVDIQRDLDEV 239          
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_RICFE (3-deoxy-manno-octulosonate cytidylyltransferase OS=Rickettsia felis GN=kdsB PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11
Identity = 46/138 (33.33%), Postives = 70/138 (50.72%), Query Frame = 3
Query:    6 IEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESF 419
            IEP  I  +++ L+ +   +  T V  +  E     + V   VD+ G A+YFSR LIP       N    +L H+G+  +  N L+ +  L PT L+  E LEQL+VLENG  +    V++    VD  +D++K   F
Sbjct:  108 IEPSSILKIIEYLKNSEYDIV-TPVVKVDRESVEASSNVTVAVDSAGKALYFSRSLIP-------NGAEKFLYHVGMYGFRKNALEKFVSLKPTFLEKTERLEQLRVLENGMTIGTCLVENVPISVDTEDDLKKAVKF 237          
The following BLAST results are available for this feature:
BLAST of CF417462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 320
Match NameE-valueIdentityDescription
KDSB_RICRO4.663e-1133.333-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_RICPU4.663e-1133.333-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_RICM54.663e-1133.333-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_RICAH4.663e-1133.333-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_RICAE4.663e-1133.333-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_RHIME4.663e-1130.823-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_GRAFK4.663e-1132.503-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_ACIAD6.090e-1131.293-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_VESOH7.954e-1129.203-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_RICFE7.954e-1133.333-deoxy-manno-octulosonate cytidylyltransferase OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-392 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-005_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417462 ID=CF417462; Name=CF417462; organism=Citrus sinensis; type=EST; length=681bp
CTCTTATTGAACCAGAGATTATAGATGGTGTTGTGAAAGCTCTGCAGGCA
GCCCCAGATGCAGTGTTCAGTACTGCTGTGACATCTTTAAAACCTGAAGA
TGCATTTGATCCAAATCGGGTGAAATGTGTTGTGGATAATCATGGTTATG
CCATATATTTTTCAAGGGGATTAATTCCATATAACAAGTCAGGAAAAGTC
AATCCACAATTTCCATATTTGCTTCATCTTGGAATTCAGAGCTATGACTC
AAACTTCCTGAAGATATATCCAGGCCTTCATCCTACTCCCCTACAACTAG
AAGAGGATCTAGAACAGCTGAAAGTCCTTGAGAATGGCTATAAGATGAAG
GTTATAAAGGTAGACCATGAAGCTCACGGTGTTGATGCTCCAGAAGACGT
TGAGAAGATAGAATCATTTATGCGTGAGAGAAACTTGTCCTAGTTTTTAG
TGACATAATCTGATTAAAAGGAAAGGATGCGAATTTGCCTGTACCAGCAG
TCAGCTTGCTCCATGTTAATTATAGTTTGGATTGGGTGGTGTGTTCTTTC
TCTCTGTGACAGTCTCTTCCCCGGGAAAATAATTCTATTTATATTTGCCT
GCCACGGTTTTTCCCATTGTTGGAGTTACCGGAGTTTTTTGTGGGTGTAC
TTGTACCAGTAGCTGTGAGTAACAGCAATTT
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