CF417462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_VIBVU (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio vulnificus GN=kdsB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.309e-18 Identity = 58/151 (38.41%), Postives = 84/151 (55.63%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQA--APDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMRERN 434 LI P II V + L A AP A A+TS E+ F+PN VK V D GYA+YFSR IP+++ G+V + + H+GI +Y + F+ Y P+ L+ E LEQL+VL G K+ V + + GVD PED+E + + ++ Sbjct: 103 LIPPSIIRQVAENLAASSAPMATLGVAITS--EEEVFNPNAVKVVTDKEGYALYFSRATIPWDRDAFARGEVLTEHSLMRHIGIYAYRAGFINTYVNWQPSSLEKIECLEQLRVLWYGEKIHVELAKEAPPAGVDTPEDLELVRELIAAKS 251
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_CHLP8 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlorobaculum parvum (strain NCIB 8327) GN=kdsB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.309e-18 Identity = 53/147 (36.05%), Postives = 85/147 (57.82%), Query Frame = 3 Query: 3 LIEPEIID-GVVKALQAAPDAVFSTAVTSLKPEDAF---DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRER 431 LI+P ID + + P +T V LKP++ DP+ VK V+D G A+YFSR IPY + + P Y H+G+ ++ ++ LK + L P+ L+ E LEQL++LENGY+++ I+ + GV+ E++E++ RER Sbjct: 101 LIDPATIDLAIAPFFEDGPMPDCTTLVFPLKPDERHIIDDPHVVKAVLDAKGNALYFSRCPIPYRR--ETLPDTRYYRHIGLYAFRADVLKAFVALPPSMLERTESLEQLRLLENGYRIRCIETTTDTPGVNTEEELEEVRRLFRER 245
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_KLEP7 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=kdsB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.143e-18 Identity = 54/146 (36.99%), Postives = 83/146 (56.85%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMR 425 +I P I+ V + L A+ + + AV E+AF+PN VK V+D GYA+YFSR IP+++ + L H+GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E++ + +R Sbjct: 103 MIPPAIVRQVAENLAASSSGMATLAVPIHDAEEAFNPNAVKVVMDAKGYALYFSRATIPWDRDRFAQSRETIGDSLLRHIGIYGYRAGFIRRYVSWAPSPLEQIEMLEQLRVLWYGEKIHVAVAAEVPGTGVDTPEDLERVRAELR 248
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_GEOSL (3-deoxy-manno-octulosonate cytidylyltransferase OS=Geobacter sulfurreducens GN=kdsB PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 5.143e-18 Identity = 52/145 (35.86%), Postives = 78/145 (53.79%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--------GKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 410 LIEP +ID + L P T + ++ D PN VK V D GYA+YFSR +P+ + + + H+G+ Y +FL + + PT L+L E LEQL+ LENG +++V++ HE+ GVD P D+EK+ Sbjct: 101 LIEPAMIDEAIAPLAENPAVRMGTLKSRIRTLHDFLSPNVVKVVTDLEGYALYFSRSPLPFFRDKWNDLKDESFASGRLLCYKHVGLYVYRRDFLMEFAKMPPTALELAEKLEQLRALENGCRIRVVETAHESIGVDTPNDLEKV 245
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_GEOMG (3-deoxy-manno-octulosonate cytidylyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=kdsB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.143e-18 Identity = 53/145 (36.55%), Postives = 77/145 (53.10%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIP--------YNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKI 410 LIEP +ID + L A T + +K D PN VK V D G A+YFSR +P V + H+G+ Y +FL + + PTPL+L E LEQL+VLENG++++V++ E+ GVD P D++K+ Sbjct: 101 LIEPAMIDEAIAPLVADASIRMGTLKSRIKSLHDFLSPNVVKVVTDREGDALYFSRSPLPNFRDKWNDLKDEAFVTGRLLCYKHVGLYVYRRDFLLAFARMAPTPLELAEKLEQLRVLENGFRIRVVETSFESIGVDTPSDLDKV 245
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_GEOLS (3-deoxy-manno-octulosonate cytidylyltransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=kdsB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.143e-18 Identity = 51/151 (33.77%), Postives = 82/151 (54.30%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--------GKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRE 428 LI+P +I+ ++ P T + +K D PN VK V DN+GYA+YFSR +P+ + + + H+G+ Y NFL Y + T L+L E LEQL+ LENG +++V++ + E+ GVD P+D+ K + M++ Sbjct: 101 LIDPAMINQAIEPFLGNPGLKMGTLKSRVKCLHDFLSPNVVKVVTDNNGYALYFSRSPLPFFRDKWQDLKDEAFASGRLLCFKHVGLYVYQRNFLLEYAAMPQTFLELSEKLEQLRALENGIRIRVVETEFESLGVDTPDDLNKAKERMKQ 251
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_WOLSU (3-deoxy-manno-octulosonate cytidylyltransferase OS=Wolinella succinogenes GN=kdsB PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.718e-18 Identity = 48/138 (34.78%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 6 IEPEIIDGVVKALQAAP----DAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEK 407 +EPE+I + + +Q A ++A + E+A DPN VK V+DNH A+YFSR IP+ + + Y HLG+ +Y + L+ + L +PL+ E LEQL+ L +G+K+ +I+V+ + G+D P+D+ + Sbjct: 99 LEPEVIASLKEKMQEASLGDSPPFMASAYKKVSQEEASDPNLVKVVLDNHSCALYFSRSPIPFWRDCTESTPLFYRGHLGLYAYTGSSLQAFCALPSSPLEEIEKLEQLRALSHGHKILMIEVETRSFGIDTPQDLNR 236
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_VIBHB (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=kdsB PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.718e-18 Identity = 54/148 (36.49%), Postives = 79/148 (53.38%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMRER 431 LI P II V L + + AV E+ F+PN VK V D GYA+YFSR IP+++ P +LH+GI +Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD PED+E + + + ++ Sbjct: 103 LIPPSIIRQVADNLAGCDAPMATLAVEIESEEEVFNPNAVKVVADERGYAMYFSRATIPWDRDNFAKQDKTIANPLMLHIGIYAYRAGFINTYVNWQPSALEQIECLEQLRVLWYGEKIHVEVAKEAPAAGVDTPEDLESVRAIVAKQ 250
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_KLEP3 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Klebsiella pneumoniae (strain 342) GN=kdsB PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.718e-18 Identity = 53/146 (36.30%), Postives = 84/146 (57.53%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMR 425 +I P I+ V + L ++ + + AV E+AF+PN VK V+D GYA+YFSR IP+++ + + L H+GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD PED+E++ + +R Sbjct: 103 MIPPAIVRQVAENLASSSSGMATLAVPIHDAEEAFNPNAVKVVMDAQGYALYFSRATIPWDRDRFAHSRETIGDSLLRHIGIYGYRAGFIRRYVSWAPSPLEQIEMLEQLRVLWYGEKIHVAVAAEVPGTGVDTPEDLERVRAELR 248
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_BORPD (3-deoxy-manno-octulosonate cytidylyltransferase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=kdsB PE=3 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 6.718e-18 Identity = 54/146 (36.99%), Postives = 80/146 (54.79%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN------PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDAPEDVEKIES 416 LI+P ++D V LQA+PDA +T L +A F+PN VK V G A+YFSR IP+ + P P L H+G+ +Y + FL+ +P L L+ E LEQL+ LE+G+ + V + GVD P D+E++ + Sbjct: 103 LIDPALVDAVAATLQASPDAAIATCACPLADAEALFNPNVVKVVCGAGGRALYFSRAPIPWARDALAGGTRVLAPGLPALHHIGLYAYRAGFLRRFPALPQGALEHYEALEQLRALEHGHAIVVHRTPQPPMAGVDTPADLERVRA 248 The following BLAST results are available for this feature:
BLAST of CF417462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417462 ID=CF417462; Name=CF417462; organism=Citrus sinensis; type=EST; length=681bpback to top |