CF417462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB1_BURCM (3-deoxy-manno-octulosonate cytidylyltransferase 1 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=kdsB1 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.718e-18 Identity = 50/153 (32.68%), Postives = 81/153 (52.94%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----------SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPEDVEKIESFMR 425 LI+P ++ V L A PD +TA + D F+PN VK +D A+YFSR IP+++ S P FP H+G+ +Y + FL+ YP L P++ E LEQL+ + +G ++ V+ +H G+D P D+ ++++ R Sbjct: 107 LIDPVLVRDVASHLAAHPDCAIATAAHPIHDAADVFNPNVVKVALDARNVAMYFSRAPIPWSRDAYLPHWPDVSAMPAPAFPVHRHIGLYAYRARFLRTYPSLAQAPVEQAEQLEQLRAMWHGERIAVLITEHAPEAGIDTPADLARVQALFR 259
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_XYLFT (3-deoxy-manno-octulosonate cytidylyltransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=kdsB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.773e-18 Identity = 53/139 (38.13%), Postives = 83/139 (59.71%), Query Frame = 3 Query: 33 VKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK-----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMRE 428 V AL +A +T T++ K ED F+PN VK V + HG A+YFSR IP+N+ + + P P+L H+G+ + ++ FL+ + + P L+ E LEQL+VLE G+++ V I +H G+D PED+ K E + + Sbjct: 113 VAALLHHSNADMATLATTIDKSEDLFNPNIVKLVCNTHGEALYFSRAPIPWNRDTFATTREPTPLGPWLRHIGLYACNAGFLQRFTTMQPGTLEQIESLEQLRVLEAGHRIAVRITPEHFPPGIDTPEDLAKAEKALED 251
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_XYLF2 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Xylella fastidiosa (strain M23) GN=kdsB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.773e-18 Identity = 53/139 (38.13%), Postives = 83/139 (59.71%), Query Frame = 3 Query: 33 VKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK-----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMRE 428 V AL +A +T T++ K ED F+PN VK V + HG A+YFSR IP+N+ + + P P+L H+G+ + ++ FL+ + + P L+ E LEQL+VLE G+++ V I +H G+D PED+ K E + + Sbjct: 118 VAALLHHSNADMATLATTIDKSEDLFNPNIVKLVCNTHGEALYFSRAPIPWNRDTFATTREPTPLGPWLRHIGLYACNAGFLQRFTTMQPGTLEQIESLEQLRVLEAGHRIAVRITPEHFPPGIDTPEDLAKAEKALED 256
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_PARD8 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=kdsB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.773e-18 Identity = 55/150 (36.67%), Postives = 81/150 (54.00%), Query Frame = 3 Query: 6 IEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFD-----PNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN---PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRER 431 I PE I +K A + +T V + +D F+ PN K V++ + A+YFSR +IPY + K P + H+G+ +Y + LK L + L+L E LEQL+ LENGYK+KV + E G+D PED+EK +F+ R Sbjct: 103 IHPEQIQ-TIKTCFADANTQIATLVKPFRSDDDFESSLFNPNSPKVVLNKNNEAMYFSRSIIPYIRGKKYTEWLPSHTFYKHIGLYAYRAQVLKEITQLPQSALELAESLEQLRWLENGYKIKVGITEQETIGIDTPEDMEKALAFLANR 251
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_DESVV (3-deoxy-manno-octulosonate cytidylyltransferase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=kdsB PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.146e-17 Identity = 51/144 (35.42%), Postives = 84/144 (58.33%), Query Frame = 3 Query: 6 IEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLL-HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERN 434 ++P ++D +V A V +T +L ++A P+RVK VV +G A+YFSR IP+ + G V L H+G+ ++ L+ + L P+ L+ E LEQL++LENG ++V+ + HGVD PED++ I + +RE + Sbjct: 109 LDPRMLDQLVAPFADASVRV-ATLAMALSAQEAQSPDRVKVVVAANGDALYFSRADIPFVRDGDVGGDTAGRLGHIGLYAFRMEALRRFTQLPPSRLEQTEKLEQLRLLENGIAIRVVPTTYRTHGVDRPEDIDVIINLLREND 251
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_DESVH (3-deoxy-manno-octulosonate cytidylyltransferase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=kdsB PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.146e-17 Identity = 51/144 (35.42%), Postives = 84/144 (58.33%), Query Frame = 3 Query: 6 IEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLL-HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRERN 434 ++P ++D +V A V +T +L ++A P+RVK VV +G A+YFSR IP+ + G V L H+G+ ++ L+ + L P+ L+ E LEQL++LENG ++V+ + HGVD PED++ I + +RE + Sbjct: 109 LDPRMLDQLVAPFADASVRV-ATLAMALSAQEAQSPDRVKVVVAANGDALYFSRADIPFVRDGDVGGDTAGRLGHIGLYAFRMEALRRFTQLPPSRLEQTEKLEQLRLLENGIAIRVVPTTYRTHGVDRPEDIDVIINLLREND 251
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_CHLPN (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia pneumoniae GN=kdsB PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.146e-17 Identity = 51/140 (36.43%), Postives = 80/140 (57.14%), Query Frame = 3 Query: 6 IEPEIIDGVVKALQAAPDAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 422 + E++D +V+ L+++P+A T V + E+ +VKCV D+ G A+YFSR IP+ + P LH+G+ ++ L Y TPL EDLEQL+ LE+G K+ V VD ++ VD PED+ K+E ++ Sbjct: 111 LNSEVVDALVQKLRSSPEAELVTPVALTTDREEILTEKKVKCVFDSEGRALYFSRSPIPFI----LKKATPVYLHIGVYAFKREALFRYLQHSSTPLSDAEDLEQLRFLEHGGKIHVCIVDAKSPSVDYPEDIAKVEQYI 246
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB1_BURA4 (3-deoxy-manno-octulosonate cytidylyltransferase 1 OS=Burkholderia ambifaria (strain MC40-6) GN=kdsB1 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.146e-17 Identity = 49/153 (32.03%), Postives = 81/153 (52.94%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPE-DAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN----------PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-GVDAPEDVEKIESFMR 425 LI+P ++ V L A PD +TA + D F+PN VK +D A+YFSR IP+++ + P FP H+G+ +Y + FL+ YP L P++ E LEQL+ + +G ++ V+ +H G+D P D+ ++++ R Sbjct: 107 LIDPMLVRDVASHLAAHPDCAIATAAHPIHDAADVFNPNVVKVALDARNVAMYFSRAPIPWSRDAYLPHWPDVATMPPPAFPVHRHIGLYAYRARFLRTYPSLAQAPVEQAEQLEQLRAMWHGERIAVLITEHAPEAGIDTPADLARVQALFR 259
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_XYLFM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Xylella fastidiosa (strain M12) GN=kdsB PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.497e-17 Identity = 53/139 (38.13%), Postives = 83/139 (59.71%), Query Frame = 3 Query: 33 VKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK-----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMRE 428 V AL +A +T T++ K ED F+PN VK V + HG A+YFSR IP+N+ + + P P+L H+G+ + ++ FL+ + + P L+ E LEQL+VLE G+++ V I +H G+D PED+ K E + + Sbjct: 118 VAALLHHSNADMATLATTIDKSEDLFNPNIVKLVCNAHGEALYFSRAPIPWNRDTFATTREPTPLGPWLRHIGLYACNAGFLQRFTTMQPGTLEQIESLEQLRVLEAGHRIAVRITPEHFPPGIDTPEDLAKAEKALED 256
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_POLNA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Polaromonas naphthalenivorans (strain CJ2) GN=kdsB PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.497e-17 Identity = 56/144 (38.89%), Postives = 79/144 (54.86%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPY------LLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDAPEDVEKI 410 LI P +ID V + L+A PD STA S+ D +PN VK V+D A+YFSR IP + + + L H+GI +Y FL+ +P L PL+ E LEQL+ L +GY++ V +H GVD PED+E++ Sbjct: 103 LINPALIDAVARQLEARPDCAMSTAAHSIDELADFLNPNVVKVVLDARQTALYFSRAPIPAARDLAGQAWWKHGNLPKPLRHVGIYAYRVGFLRQFPQLPQAPLEQLESLEQLRALWHGYRIAVHITEHAPGPGVDTPEDLERV 246 The following BLAST results are available for this feature:
BLAST of CF417462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417462 ID=CF417462; Name=CF417462; organism=Citrus sinensis; type=EST; length=681bpback to top |