CF417462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_CHLT3 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=kdsB PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.497e-17 Identity = 49/146 (33.56%), Postives = 82/146 (56.16%), Query Frame = 3 Query: 3 LIEPEIIDGVVKAL---QAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFMRER 431 LI PE+ID + A P A + S PE +PN VK V D +GYA+YFSR IPY ++ P+ H+G+ ++ L+ + L P+ L+ E LEQL++LENG ++K + + ++ VD +D+ K+++ + ++ Sbjct: 101 LIPPEMIDSAILPFIENAALPCATLIQPIVSDVPEILQNPNVVKVVTDKNGYALYFSRSPIPYQRNSDAQPKI--FRHIGLYAFRKPALETFTTLPPSMLEETERLEQLRLLENGIRIKCVITNLDSQAVDTADDLAKVKAILAKK 244
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_VIBPA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio parahaemolyticus GN=kdsB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.955e-17 Identity = 56/149 (37.58%), Postives = 82/149 (55.03%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPED-AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMRER 431 L+ P II V L AA DA +T ++ ED F+PN VK V D GYA+YFSR IP+++ P + H+GI +Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD PED+E + + + ++ Sbjct: 103 LVPPVIIRQVADNL-AASDAPMATLAVEIESEDEVFNPNAVKVVADERGYAMYFSRATIPWDRDNFAKQDKAIVNPLMRHIGIYAYRAGFINTYVNWAPSALEQIECLEQLRVLWYGEKIHVAVAKEAPAAGVDTPEDLEAVRAIVAKK 250
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_VIBCM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=kdsB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.955e-17 Identity = 57/149 (38.26%), Postives = 81/149 (54.36%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMRER 431 LI P II V L A + + AV + F+PN VK + D GYA+YFSR IP++ K+ K Q P L H+GI +Y + F+ Y P+ L+ E LEQL+VL +G K+ V + ++ GVD PED+E + + ER Sbjct: 103 LIPPAIIRQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFAKADKAIVQ-PLLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVVRRIVAER 250
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_VIBCH (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio cholerae GN=kdsB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.955e-17 Identity = 57/149 (38.26%), Postives = 81/149 (54.36%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMRER 431 LI P II V L A + + AV + F+PN VK + D GYA+YFSR IP++ K+ K Q P L H+GI +Y + F+ Y P+ L+ E LEQL+VL +G K+ V + ++ GVD PED+E + + ER Sbjct: 103 LIPPAIIRQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFAKADKAIVQ-PLLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVVRRIVAER 250
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_VIBC3 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=kdsB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.955e-17 Identity = 57/149 (38.26%), Postives = 81/149 (54.36%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMRER 431 LI P II V L A + + AV + F+PN VK + D GYA+YFSR IP++ K+ K Q P L H+GI +Y + F+ Y P+ L+ E LEQL+VL +G K+ V + ++ GVD PED+E + + ER Sbjct: 103 LIPPAIIRQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFAKADKAIVQ-PLLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVVRRIVAER 250
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_HAEIN (3-deoxy-manno-octulosonate cytidylyltransferase OS=Haemophilus influenzae GN=kdsB PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.955e-17 Identity = 57/149 (38.26%), Postives = 80/149 (53.69%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS--------GKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFM 422 LI P I+ V L + S AV E+ F+PN VK + D GY +YFSR +IPY++ KV YL H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+EK+ + + Sbjct: 103 LIPPVIVRQVADNLAKFNVNMASLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLSDAYLRHIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDLEKVRAIL 251
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_HAEI8 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Haemophilus influenzae (strain 86-028NP) GN=kdsB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.955e-17 Identity = 57/149 (38.26%), Postives = 81/149 (54.36%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ--------FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFM 422 LI P I+ V L + S AV E+ F+PN VK + D GY +YFSR +IPY++ +N Q YL H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + + A GVD ED+EK+ + + Sbjct: 103 LIPPVIVRQVADNLAKFNVNMASLAVKIHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLADAYLRHIGIYAYRAGFIKQYVQWAPTQLENLEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDLEKVRAIL 251
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_FRAP2 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=kdsB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.955e-17 Identity = 55/141 (39.01%), Postives = 79/141 (56.03%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP---YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIK-VDHEAHGVDAPEDVEKI 410 LI E I+ + L P+AV ST + + ED ++PN VK V D + YA+YFSR IP+ + N Q + H+GI +Y FLK Y L +P++ E LEQL+VL NGYK+ + + GVD +D+EK+ Sbjct: 104 LIPVENIEQAAQLLIEKPEAVVSTLCERITEAEDIYNPNNVKVVFDKNNYALYFSRASIPFERGFSENHQVSISEFFRHIGIYTYRVGFLKHYAELAISPIEKYEALEQLRVLYNGYKIAIEQSAKPTPAGVDTLQDLEKV 244
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_CHLCV (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydophila caviae GN=kdsB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.955e-17 Identity = 49/140 (35.00%), Postives = 78/140 (55.71%), Query Frame = 3 Query: 6 IEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPN-RVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDAPEDVEKIESFM 422 ++ ++D +V+ L+ P+ T V N +VKCV D +G A+YFSR IP+ + + P LH+G+ ++ N L Y PTPL EDLEQL++LE+G + V V+ ++ VD PED+ K+E ++ Sbjct: 111 LQHTVVDALVRKLEEFPEIQIVTPVAKTTDSHEILTNQKVKCVFDKNGKALYFSRSPIPHI----LKKETPIYLHIGVYAFRRNALFNYIESSPTPLSQAEDLEQLRILEHGGSIHVCVVEAKSPSVDYPEDINKVEKYL 246
BLAST of CF417462 vs. ExPASy Swiss-Prot
Match: KDSB_PHOLL (3-deoxy-manno-octulosonate cytidylyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=kdsB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.553e-17 Identity = 56/147 (38.10%), Postives = 79/147 (53.74%), Query Frame = 3 Query: 3 LIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDAPEDVEKIESFMRE 428 LI EII V + L + + AV E+AF+PN VK V+D GYA+YFSR IP+ + + + +L H+GI +Y + F++ Y P+PL+ E LEQL+VL G K+ V I + GVD PED+ I E Sbjct: 102 LIPEEIIKQVAENLAGCKAGMATLAVQIHDAEEAFNPNAVKVVMDKQGYALYFSRATIPWERGRFIQSRETIGDNFLRHIGIYAYRAGFIRRYVQWEPSPLEQIEMLEQLRVLWYGEKIHVGIALKAPGVGVDTPEDLAAIRKVFTE 248 The following BLAST results are available for this feature:
BLAST of CF417462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 320
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417462 ID=CF417462; Name=CF417462; organism=Citrus sinensis; type=EST; length=681bpback to top |